| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3087880 = | NA (NA) | 7 (0.070) | 6/178 | 13.3 | NA | intergenic (+20/‑404) | metK/galP | S‑adenosylmethionine synthetase/D‑galactose transporter |
| ? | NC_000913 | 3087905 = | NA (NA) | intergenic (+45/‑379) | metK/galP | S‑adenosylmethionine synthetase/D‑galactose transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3087988‑3087880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcctttTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCAC > NC_000913/3087905‑3088001 GCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGG > 1:375673/1‑100GCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGG > 2:796393/1‑100GCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGG > 2:655970/1‑100 GGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCT < 2:845364/100‑1 TGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGG < 2:2383462/100‑1 TGAAACGTGATCAGGAAGAATGATGTTATTGGGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGG < 1:2644790/100‑1 GAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTAACCAAAAGAAAAAGGCCAGCGCGAGGCTGGC < 2:204105/100‑1 AAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCC < 1:655974/100‑1 AAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCC > 2:222771/1‑100 AAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCC < 1:869992/100‑1 AAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCC < 1:599030/100‑1 AACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCT < 1:2075969/100‑1 ACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTT < 1:2052979/100‑1 ACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTT < 2:375670/100‑1 CGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTTT < 1:456484/100‑1 GCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAA > 1:28708/1‑100 CAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCC > 1:1126872/1‑100 AAGAAAAAGGCCAGCGCGAGGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGA > 1:2280994/1‑100 AAAAAGGCCAGCGCGAGGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCA > 1:2435264/1‑100 AAAGGCCAGCGCGAGGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACG > 1:1194384/1‑100 agGGCCAGCGCGAAGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCAC > 1:1919844/3‑98 AAGGCCAGCGCGAGGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGT > 2:1912300/1‑100 gtGCTGGTCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGA < 1:1174715/97‑1 CTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTAT > 2:811974/1‑100 TGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATC < 2:1785909/100‑1 TGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATC < 2:605297/100‑1 ggtCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAAGAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCA < 1:622846/97‑1 GGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCA < 2:2093785/100‑1 GGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCA < 1:1632468/100‑1 CCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATC < 1:1620440/100‑1 TTTTTTTTTTGTATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCA < 1:350796/99‑1 TTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCAC < 1:845368/100‑1 TTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCAC < 2:599025/100‑1 TTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCAC < 1:2088982/100‑1 GCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3087988‑3087880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcctttTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCAC > NC_000913/3087905‑3088001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |