New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4620598 =105 (1.050)5 (0.050) 5/166 NT 5.3% coding (996/1224 nt) deoB phosphopentomutase
?NC_000913 4620626 = 82 (0.880)coding (1024/1224 nt) deoB phosphopentomutase
Rejected: Frequency below cutoff threshold.

AGTACCGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCATCGCGCAGCAGAGACATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4620702‑4620598
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacatcCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAGTAAA  >  NC_000913/4620626‑4620723
                                                                                                                                                                                                           
AGTACCGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCATCGCGCAGCAGAG                                                                                                         <  2:182644/100‑1
  TACCGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCATCGCGCAGCAGAGAC                                                                                                       <  1:2475643/100‑1
  TACCGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCATCGCGCAGCAGAGAC                                                                                                       <  2:2709382/100‑1
   ACCGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCATCGCGCAGCAGAGACA                                                                                                      >  1:786577/1‑100
   ACCGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCATCGCGCAGCAGAGACA                                                                                                      >  2:114983/1‑100
    CCGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCATCGCGCAGCAGAGACAT                                                                                                     >  1:2030358/1‑100
    CCGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCATCGCGCAGCAGAGACAT                                                                                                     >  2:377753/1‑100
     CGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCGTCGCGCAGCAGAGACATC                                                                                                    <  2:1977071/100‑1
     CGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCATCGCGCAGCAGAGACATC                                                                                                    <  2:242150/100‑1
                                                                        ATCAGGATGTCGTCATCGCGCAGCAGAGACATCCTGATCCTCACCGCTGACCACGGTTGCGAACCGACATGGACCGGTACTGACCCCACGCGTGAACACA                                 >  2:2736713/1‑100
                                                                           AGGATGTCGTCATCGCGCAGCAGAGACATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTC                              >  1:890350/1‑100
                                                                            GGATGTCGTCATCGCGCAGCAGAGACATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCC                             >  1:1296123/1‑100
                                                                              ATGTCGTCATCGCGCAGCAGAGACATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGG                           >  1:617586/1‑100
                                                                                  CGTCATCGCGCAGCAGAGACATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACT                       >  2:466777/1‑100
                                                                                                   GACATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAG      <  1:1548680/100‑1
                                                                                                   GACATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAG      <  2:593772/100‑1
                                                                                                     CATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAGTA    >  2:282612/1‑100
                                                                                                     CATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAGTA    <  2:1759245/100‑1
                                                                                                     CATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAGTA    <  1:666611/100‑1
                                                                                                      ATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAGTAA   <  2:1221967/100‑1
                                                                                                      ATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAGTA    <  2:503324/99‑1
                                                                                                       TCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGGAAGTAAA  >  2:671353/1‑100
                                                                                                       TCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAGTAAA  >  2:2743764/1‑100
                                                                                                                                                                                                           
AGTACCGGAATGTGTTCACGCGTGTGGTCAGTACCGGTCCAGGTCGGATCGCAACCGTGGTCAGCGGTGAGGATCAGGATGTCGTCATCGCGCAGCAGAGACATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4620702‑4620598
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacatcCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAGTAAA  >  NC_000913/4620626‑4620723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.