| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4625174 = | 122 (1.220) | 4 (0.040) | 3/166 | NT | 3.3% | coding (280/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | NC_000913 | 4625219 = | 120 (1.290) | coding (325/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4625278‑4625174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG > NC_000913/4625219‑4625317 ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGC < 2:161879/100‑1ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGC > 1:86005/1‑100 CAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAGCCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTG < 2:609256/100‑1 CAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTG < 2:1776713/100‑1 CAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTG > 1:601224/1‑100 AATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGC > 1:860806/1‑100 ATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCG > 1:2074928/1‑100 TACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGC < 2:45592/100‑1 TACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGC > 2:1354169/1‑100 AAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCA > 1:2059568/1‑100 AAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCA > 1:475473/1‑100 CCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGAT > 1:173576/1‑100 TGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGT > 1:650502/1‑100 TGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGT > 1:291650/1‑100 TGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGT > 2:708546/1‑100 GCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGC < 1:1159548/100‑1 CACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG < 1:2673408/100‑1 CACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG < 1:2370725/100‑1 ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4625278‑4625174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG > NC_000913/4625219‑4625317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |