| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3423804 | 0 (0.000) | 32 (0.340) | 10/166 | NT | 100% | intergenic (‑17/+76) | rrfD/rrlD | 5S ribosomal RNA of rrnD operon/23S ribosomal RNA of rrnD operon |
| ? | NC_000913 | 4040488 = | NA (NA) | intergenic (+65/‑29) | rrlA/rrfA | 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon | |||||
CACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTA > NC_000913/3423705‑3423903 | cacaCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA > 1:2699425‑M1/1‑100 (MQ=255)cacaCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA < 1:2624748‑M1/100‑1 (MQ=255)cacaCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA > 1:160854‑M1/1‑100 (MQ=255) aTCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCTCTACGGCCGCCAGGCAAATTCTGTTTTAGCAGAacgcagaag < 1:1863209‑M1/100‑10 (MQ=255) ggCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcgg < 2:1341295‑M1/100‑13 (MQ=255) ggCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGACAAATTCTGTTTTATCAGAacgcagaa > 2:1727769‑M1/1‑88 (MQ=255) tACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctga < 2:464564‑M1/100‑18 (MQ=255) aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCATGTGGGATCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgat < 2:642376‑M1/100‑19 (MQ=255) cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgata < 1:104604‑M1/100‑20 (MQ=255) cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgata < 1:166431‑M1/100‑20 (MQ=255) cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatg < 1:401031‑M1/100‑20 (MQ=255) cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatg < 1:2053252‑M1/100‑20 (MQ=255) ggCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataa < 2:2338500‑M1/100‑21 (MQ=255) gCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaa < 1:32551‑M1/100‑22 (MQ=255) cttttcaCTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataa < 2:253325‑M1/96‑21 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACTACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:296373‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:2645845‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:1821222‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:739774‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:565002‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaac < 1:2070359‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaac < 1:1247926‑M1/100‑24 (MQ=255) tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 2:2446595‑M1/100‑25 (MQ=255) tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacn < 2:378565‑M1/100‑25 (MQ=255) tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 1:2171914‑M1/100‑25 (MQ=255) tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 1:2685473‑M1/100‑25 (MQ=255) tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 1:1727777‑M1/100‑25 (MQ=255) tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 2:1748728‑M1/100‑25 (MQ=255) tttCACTTCTGAGGTCGGCGTGGGGTCAGGTGAGACAACCGCGCTACGAACGCCAGGCAAATTCTGTGTTATCAGAacgcagaagcggtctgataaaa < 1:758400‑M1/98‑23 (MQ=255) ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 1:1172147‑M1/100‑26 (MQ=255) ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 1:1006742‑M1/100‑26 (MQ=255) cTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacagaatt < 1:988143‑M1/100‑30 (MQ=255) cTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacagaatt < 1:2075544‑M1/100‑30 (MQ=255) tgggggttcggCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 2:2546852‑M1/88‑25 (MQ=255) cTGTTTTATCAGAccgcttctgcgttctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaa > 1:1340458‑M1/1‑13 (MQ=255) gTTTTATCAGAccgcttctgcgttctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaac > 1:935438‑M1/1‑11 (MQ=255) tacagcagaacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagagaaacgc < 2:1800300‑M1/95‑92 (MQ=255) aTCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccgcctgaccccatgccgaactcagaagtgaaacgccgt > 1:1495672‑M1/1‑6 (MQ=255) aTCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgcaacgccg > 2:217069‑M1/1‑6 (MQ=255) aTCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgt > 2:996314‑M1/1‑6 (MQ=255) aTCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgt < 2:454834‑M1/100‑95 (MQ=255) aTCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgt > 2:2273820‑M1/1‑6 (MQ=255) aTCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgt < 1:2002967‑M1/100‑95 (MQ=255) aTCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgt > 1:885415‑M1/1‑6 (MQ=255) tCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgta > 1:2197198‑M1/1‑5 (MQ=255) cAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtag < 2:289494‑M1/100‑97 (MQ=255) cAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtag < 2:1128966‑M1/100‑97 (MQ=255) cAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtag < 2:619832‑M1/100‑97 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtctcacctgaccccatgccgaactcagaagtgaaacgccgtagc > 2:1632741‑M1/1‑3 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc > 2:1887628‑M1/1‑3 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc > 2:330787‑M1/1‑3 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc > 2:1454219‑M1/1‑3 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc > 2:2105855‑M1/1‑3 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc > 2:533347‑M1/1‑3 (MQ=255) gAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcg > 1:2173314‑M1/1‑2 (MQ=255) gAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcg > 2:2407196‑M1/1‑2 (MQ=255) gAacgcagaagcggtctgataaaacagaatgtgccgggcggcagtagcgcggtggtcgcacctgaccccatgccgaactcagaagtgaaacgccgtagcg < 1:2654182‑M1/100‑99 (MQ=255) aacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgc < 2:266006‑M1/100‑100 (MQ=255) | CACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTA > NC_000913/3423705‑3423903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |