New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 5537 =NA (NA)17 (0.240)
+CAGCGCCTGATGCGACGCTGGCGCGT
8/126 NT NA intergenic (+7/+146) yaaX/yaaA DUF2502 family putative periplasmic protein/peroxide resistance protein, lowers intracellular iron
?NC_000913 832304 = NA (NA)noncoding (16/98 nt) RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 150 total aligned reads displayed.

CACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTT  >  NC_000913/5438‑5635
                                                                                                   |                                                                                                  
cACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACaa                                                                                                    >  1:1769410/1‑100 (MQ=255)
  ccTACACGGACCGCCGCCACCGCCGCGACACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAAt                                                                                                  >  2:2288316/1‑100 (MQ=255)
     acacGGACCGCCGCCACCGCCGCGCCACCATAAGAGAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGcc                                                                                               <  1:1844802/100‑1 (MQ=255)
        cGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCggg                                                                                            >  2:1030946/1‑100 (MQ=255)
        cGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCACCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCggg                                                                                            <  1:1057727/100‑1 (MQ=255)
          gACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTa                                                                                          >  1:1341026/1‑100 (MQ=255)
            ccgccgCCACCGCCTCGCCATCATAAGAAAGCGCCTCATGATCATCACGGCGTTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAAc                                                                                        <  2:523020/100‑1 (MQ=255)
            ccgccgCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTagc                                                                                        <  1:1976470/100‑3 (MQ=255)
            ccgccgCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAAc                                                                                        <  1:1221466/100‑1 (MQ=255)
            ccgccgCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAAc                                                                                        >  1:2234481/1‑100 (MQ=255)
             cgccgcCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACa                                                                                       >  1:1268428/1‑100 (MQ=255)
              gccgccACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACaa                                                                                      >  1:494054/1‑100 (MQ=255)
              gccgccACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACaa                                                                                      >  2:1730519/1‑100 (MQ=255)
              gccgccACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACaa                                                                                      >  2:693392/1‑100 (MQ=255)
                 nccACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATcc                                                                                   >  2:762870/2‑100 (MQ=255)
                    aCCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGc                                                                                <  2:1394663/100‑1 (MQ=255)
                     tacaaaagcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCa                                                                               >  1:1751218‑M1/79‑100 (MQ=255)
                      cgccgcGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCACACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCAt                                                                              <  2:2571607/100‑1 (MQ=255)
                      cgccgcGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCAt                                                                              <  1:1971693/100‑1 (MQ=255)
                      acaaaagcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCAt                                                                              >  2:310173‑M1/78‑100 (MQ=255)
                       caaaagcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCAtt                                                                             >  2:362085‑M1/77‑100 (MQ=255)
                        aaaagcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCATTc                                                                            >  2:1711299‑M1/76‑100 (MQ=255)
                        aaaagcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCATTc                                                                            >  2:490930‑M1/76‑100 (MQ=255)
                         cgcgCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCa                                                                           >  1:1024604/1‑100 (MQ=255)
                          gcgcCACCATAAGAACGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAg                                                                          <  1:2706364/100‑1 (MQ=255)
                          aagcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgTATGCCGGGTAACAATCCGGCATTCAg                                                                          >  1:1673975‑M1/74‑100 (MQ=255)
                          aagcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCATTCAg                                                                          >  1:1694605‑M1/74‑100 (MQ=255)
                          aagcatgcagattcaatatattgcagaagtaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCATTCAg                                                                          >  2:2352242‑M1/74‑100 (MQ=255)
                           agcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCATTCAgc                                                                         >  1:73783‑M1/73‑100 (MQ=255)
                           agcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCATTCAgc                                                                         >  1:2741624‑M1/73‑100 (MQ=255)
                            gcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCATTCAgcg                                                                        >  1:835304‑M1/72‑100 (MQ=255)
                            gcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCATTCAgcg                                                                        >  1:55182‑M1/72‑100 (MQ=255)
                            gcatgcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcgctgAATGCCGGGTAACAATCCGGCATTCAgcg                                                                        >  1:2512864‑M1/72‑100 (MQ=255)
                            gcCACCATAAGAAAGCTCCTCATGCTCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAgcg                                                                        <  1:1014443/100‑1 (MQ=255)
                             ccaccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAgcgc                                                                       >  2:2345295/1‑100 (MQ=255)
                             ccaccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAgcgc                                                                       >  1:929571/1‑100 (MQ=255)
                              caccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGcc                                                                      <  2:928064/100‑1 (MQ=255)
                               accaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCt                                                                     >  1:1646339/1‑100 (MQ=255)
                               accaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCt                                                                     >  1:504252/1‑100 (MQ=255)
                                ccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCt                                                                     >  2:756605/1‑99 (MQ=255)
                                 caTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGa                                                                   >  2:103852/1‑100 (MQ=255)
                                    aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGc                                                                <  1:711899/100‑1 (MQ=255)
                                      gAAAGCTCCTCATGATCATCACGGTGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGa                                                              <  2:1129388/100‑1 (MQ=255)
                                      gAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGa                                                              >  2:2111336/1‑100 (MQ=255)
                                      gAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGa                                                              >  2:1095030/1‑100 (MQ=255)
                                      gAAAGCTCCTCATGATCATCACGGCGGTCATGGGCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGa                                                              >  2:1819509/1‑100 (MQ=255)
                                      gAAAGCTCCTCATGATCATCACGGCGGTCATGATCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGa                                                              >  1:2605907/1‑100 (MQ=255)
                                         aGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGc                                                           >  2:884068/1‑100 (MQ=255)
                                         aGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAACCCGGCATTCAGCGCCTGATGCGACGc                                                           >  2:1825366/1‑100 (MQ=255)
                                          gCTCCTCATGATCATCACGGCGATCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCt                                                          >  2:1595094/1‑100 (MQ=255)
                                           ctcctcATGATCATCACGGCGGTCATGGTTCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGAc                                                             <  2:1807937/96‑1 (MQ=255)
                                              ctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcg                                                      >  1:978978/1‑100 (MQ=255)
                                              ctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcg                                                      >  1:1537953/1‑100 (MQ=255)
                                               tcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgc                                                     >  2:1203039/1‑100 (MQ=255)
                                                  tGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTc                                                  <  2:1318233/100‑1 (MQ=255)
                                                   gATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCt                                                 <  1:802922/100‑1 (MQ=255)
                                                   gATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCt                                                 >  1:453961/1‑100 (MQ=255)
                                                     tcatcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGGCAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTa                                               <  2:1756282/100‑1 (MQ=255)
                                                      catcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTAt                                              >  1:1686359/1‑100 (MQ=255)
                                                      catcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTAt                                              >  1:1270653/1‑100 (MQ=255)
                                                        tcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATCCAGCGCCTGATGCGACGCTGGCGCGTCTTATCa                                            <  2:1646332/100‑1 (MQ=255)
                                                        tcaCGGCGGTCATGGTCCAGGAAAACATGACCGCTAAATGACGAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCa                                            <  2:799809/100‑1 (MQ=255)
                                                         caCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCa                                            >  2:332010/1‑99 (MQ=255)
                                                         caCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAg                                           >  1:1063010/1‑100 (MQ=255)
                                                           cggcggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAACCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCtagatcgga                                         >  2:1300167/1‑92 (MQ=38)
                                                            ggcggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGc                                         >  1:2685136/1‑99 (MQ=255)
                                                              cggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCt                                       <  1:2114283/99‑1 (MQ=255)
                                                              cggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTa                                      >  1:2353768/1‑100 (MQ=255)
                                                               ggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTAc                                     >  1:618230/1‑100 (MQ=255)
                                                                  cATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGtt                                  <  2:1989215/100‑1 (MQ=255)
                                                                  cATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGtt                                  <  1:1925972/100‑1 (MQ=255)
                                                                  cATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGtt                                  <  1:416765/100‑1 (MQ=255)
                                                                  cATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGtt                                  <  1:2434234/100‑1 (MQ=255)
                                                                  cATGGTCCAGACAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGtt                                  >  2:929543/1‑100 (MQ=255)
                                                                     ggTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCTCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTaa                                >  2:1902893/1‑99 (MQ=255)
                                                                     ggTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAt                               >  1:630181/1‑100 (MQ=255)
                                                                         cAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTg                           >  2:640257/1‑100 (MQ=255)
                                                                         cAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTg                           <  1:2400126/100‑1 (MQ=255)
                                                                         cAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTg                           >  1:220249/1‑100 (MQ=255)
                                                                          aGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTg                           >  2:129696/1‑99 (MQ=255)
                                                                          aGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGc                          <  2:2445909/100‑1 (MQ=255)
                                                                           ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCa                         >  1:10904/1‑100 (MQ=255)
                                                                           ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCa                         <  2:462488/100‑1 (MQ=255)
                                                                           ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCa                         <  1:236377/100‑1 (MQ=255)
                                                                           ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCa                         >  2:1425747/1‑100 (MQ=255)
                                                                              aaaCATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAat                       <  2:1915165/99‑1 (MQ=255)
                                                                                aCATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAatata                    <  2:1568609/100‑1 (MQ=255)
                                                                                   tCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTg                 >  1:156017/1‑100 (MQ=255)
                                                                                      ccGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAAt              >  1:1334301/1‑100 (MQ=255)
                                                                                       cGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATc             >  1:584732/1‑100 (MQ=255)
                                                                                        gCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCt            >  2:2054659/1‑100 (MQ=255)
                                                                                         cTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCGGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTg           <  1:1109574/100‑1 (MQ=255)
                                                                                          tAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGc          <  2:213223/100‑1 (MQ=255)
                                                                                           aaaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCa         <  2:2685118/100‑1 (MQ=255)
                                                                                           aaaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCa         <  1:1214825/100‑1 (MQ=255)
                                                                                           aaaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCa         >  2:1790018/1‑100 (MQ=255)
                                                                                              tGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGc      <  2:120924/100‑1 (MQ=255)
                                                                                                 cAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCttt   >  1:2466022/1‑100 (MQ=255)
                                                                                                 cAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCttt   >  1:2016587/1‑100 (MQ=255)
                                                                                                  aaaTGCCGAGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCtttt  <  2:132721/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
CACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTT  >  NC_000913/5438‑5635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.