| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3622151 | NA (NA) | 7 (0.070) | 4/168 | NT | 100% | coding (2960/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3622177 | 0 (0.000) | coding (2986/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
TGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCAC > NC_000913/3622074‑3622249 | tGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTAC > 2:2672‑M2/1‑100 (MQ=255)tGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTAC > 2:2542359‑M2/1‑100 (MQ=255)tGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTAC < 1:551455‑M2/100‑1 (MQ=255)tGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTAC > 1:2733452‑M2/1‑100 (MQ=255) gAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGTACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACG > 2:1908737‑M2/1‑100 (MQ=255) gAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACG > 2:858525‑M2/1‑100 (MQ=255) gAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACG > 1:1423463‑M2/1‑100 (MQ=255) gAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACG < 2:2366227‑M2/100‑1 (MQ=255) gAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACG > 1:2707659‑M2/1‑100 (MQ=255) gAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACG > 1:2239085‑M2/1‑100 (MQ=255) gAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACG < 1:1528485‑M2/100‑1 (MQ=255) aGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGA < 1:311202‑M2/100‑1 (MQ=255) aGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGA < 1:2397510‑M2/100‑1 (MQ=255) gCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGAC > 1:2473729‑M2/1‑100 (MQ=255) gCGGACTCACCGGTACCACTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGACGAGCCGCTGGTCGAAAGTCGCTATCTTTACGAC > 1:1665618‑M2/1‑100 (MQ=255) atctctcacCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACC > 1:762290‑M2/5‑100 (MQ=255) cTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCagat < 2:762287‑M2/100‑5 (MQ=255) gcgGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctgact < 1:439935‑M2/100‑51 (MQ=255) gCCGCTGGTCGAAAGCCGCTATCTTTACGACCagcggctctgcatattgtgtccgcgtgtagtgcaccagccggtgctgactgtcgtaatggtaccggtg < 1:775983‑M2/100‑69 (MQ=255) ccGCTGGTCGAAAGTCGCTATCTTTACGACCagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctgactgtcgtaatggtaccggtga < 1:635539‑M2/100‑70 (MQ=255) ccGCTGGTCGAAAGTCGCTATCTTTACGACCagcggctctgcatattgtgtccgcgtgtagtgcaccagccggtgctgactgtcgtaatggtaccggtgg < 1:2273326‑M2/100‑70 (MQ=255) cGCTGGTCGAAAGTCGCTATCTTTACGACCagcggctctgcatattgtgtccgcgtgtagtgcaccagccggtgctgactgtcgtaatggtaccggtggg < 1:1630199‑M2/100‑71 (MQ=255) gCTGGTCGAAAGTCGCTATCTTTACGACCagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctgactgtcgtaatggtaccggtgagt < 1:808975‑M2/100‑72 (MQ=255) cTGGTCGAAAGTCGCTATCTTTACGACCagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctgactgtcgtaatggtaccggtgagtc < 2:1337720‑M2/100‑73 (MQ=255) | TGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCAC > NC_000913/3622074‑3622249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |