New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3781698 =NA (NA)4 (0.040) 4/164 NT NA noncoding (1/29 nt) REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3781727 = NA (NA)intergenic (+39/+14) trmL/cysE tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent/serine acetyltransferase

Only 100 of 113 total aligned reads displayed.

GCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCAT  >  NC_000913/3781600‑3781797
                                                                                                  |                                                                                                   
ccagacagcgataagccatcaatggatatggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGc                                                                                                    <  2:1820696‑M1/2‑1 (MQ=255)
   gtaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCGTGGCGGCAGTTGGGGTTTCCGGGAGCGGTATTGAGAGATTATTTACTGTAGGCCg                                                                                                  <  2:1698690/97‑1 (MQ=255)
   gcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCgg                                                                                                 >  2:1532653/1‑100 (MQ=255)
      tGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATa                                                                                              <  1:798345/100‑1 (MQ=255)
      tGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATa                                                                                              <  2:653203/100‑1 (MQ=255)
         ttccgatctaTGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgat                                                                                           <  1:931076/91‑1 (MQ=255)
         aTCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgat                                                                                           <  2:1528205/100‑1 (MQ=255)
         aTCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgat                                                                                           <  2:217330/100‑1 (MQ=255)
          tCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatg                                                                                          <  1:268813/100‑1 (MQ=255)
           cTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTATGCCGGATAgatga                                                                                         <  2:1700411/100‑1 (MQ=255)
            tGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatgat                                                                                        <  1:2294743/100‑1 (MQ=255)
            tGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatgat                                                                                        <  2:401288/100‑1 (MQ=255)
            tGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatgan                                                                                        <  1:560366/100‑2 (MQ=255)
             gTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGAtt                                                                                       <  2:1535779/100‑1 (MQ=255)
             gTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGAtt                                                                                       >  1:476409/1‑100 (MQ=255)
             gTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGAtt                                                                                       >  1:2519555/1‑100 (MQ=255)
               ccAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTAc                                                                                     >  2:2648986/1‑100 (MQ=255)
                 aaTGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACAt                                                                                   <  1:2257199/100‑1 (MQ=255)
                  aTGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTGGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatagatcgg                                                                                    >  2:931072/1‑91 (MQ=255)
                      ggTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCAt                                                                              >  2:64328/1‑100 (MQ=255)
                       gtgtCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGAGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATc                                                                             >  1:152526/1‑100 (MQ=255)
                        tgtCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATcc                                                                            <  2:2006152/100‑1 (MQ=255)
                           cGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGc                                                                         >  1:1094661/1‑100 (MQ=255)
                           cGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGc                                                                         <  1:268949/100‑1 (MQ=255)
                           cGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCACCCGGc                                                                         >  2:30268/1‑100 (MQ=255)
                            tggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGATTGCATCGCATCCGGCa                                                                        >  1:2342445‑M1/71‑100 (MQ=255)
                            ggTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                        <  2:460314/100‑1 (MQ=255)
                             ggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGATTACATCGCATCCGGCAc                                                                       >  1:1736850‑M1/70‑100 (MQ=255)
                              tAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACg                                                                      >  2:1303955/1‑100 (MQ=255)
                              gaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGATTACATCGCATCCGGCACg                                                                      >  1:281434‑M1/69‑100 (MQ=255)
                                gtggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGAt                                                                    <  2:930870/100‑1 (MQ=255)
                                  ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                  >  1:1300633/1‑100 (MQ=255)
                                  ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                  <  2:2558146/100‑1 (MQ=255)
                                  ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                  >  1:2669973/1‑100 (MQ=255)
                                  ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                  >  1:1194962/1‑100 (MQ=255)
                                    tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                                >  2:26262/1‑100 (MQ=255)
                                    tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                                <  2:2639530/100‑1 (MQ=255)
                                     gtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                               >  1:647786/1‑100 (MQ=255)
                                     atttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                                >  2:1889295‑M1/62‑99 (MQ=255)
                                       aTGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGa                                                             >  1:180533/1‑100 (MQ=255)
                                       aTGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGa                                                             >  1:1280247/1‑100 (MQ=255)
                                        tGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGAc                                                            <  2:2125183/100‑1 (MQ=255)
                                          aaGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACAt                                                          >  2:698042/1‑100 (MQ=255)
                                           aGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACAtt                                                         <  2:1487384/100‑1 (MQ=255)
                                            gCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTa                                                        <  2:147213/100‑1 (MQ=255)
                                             ccTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAg                                                       >  1:2433734/1‑100 (MQ=255)
                                              cTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGa                                                      >  1:1471943/1‑100 (MQ=255)
                                               tGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTGGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGat                                                     <  2:836206/100‑1 (MQ=255)
                                                 gcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcc                                                   >  1:769002/1‑100 (MQ=255)
                                                 gcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcc                                                   <  1:1089094/100‑1 (MQ=255)
                                                  cggcAGTTGGGGTGTCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatccc                                                  >  1:1846896/1‑100 (MQ=255)
                                                  cggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatccc                                                  <  1:448004/100‑1 (MQ=255)
                                                  cggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatccc                                                  <  1:26262/100‑1 (MQ=255)
                                                  cggcAGTTGGGGTATCCGGAAGAGTAATTGAGATATTAGTTACTGTAGGCCGGATAGATGATTACATTTCAACCGGCACGATCACAGGACATTAGatccc                                                  <  1:2469432/100‑1 (MQ=255)
                                                      aGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatcc                                              <  2:2379067/100‑1 (MQ=255)
                                                        ttGGGGTATCCGGGAGCGGTATTGCGAGATTCGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTACATCCCATcccc                                            <  2:977473/100‑1 (MQ=255)
                                                            ggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                        >  1:2584322/1‑100 (MQ=255)
                                                              tATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTc                                      >  2:1998814/1‑100 (MQ=255)
                                                                  cGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAAt                                  >  1:2044527/1‑100 (MQ=255)
                                                                   gggAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCCTCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATg                                 <  2:989061/100‑1 (MQ=255)
                                                                     gAGCGGTATTGAGAGATTAGGTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTa                               <  2:1897343/100‑1 (MQ=255)
                                                                      aGCGGTATTGAGAGATTAGTTACTGTAGGCCTGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTAt                              <  1:1020676/100‑1 (MQ=255)
                                                                       gCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATg                             >  1:335870/1‑100 (MQ=255)
                                                                         ggTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGt                           >  2:1656042/1‑100 (MQ=255)
                                                                          gTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGtt                          >  2:1832958/1‑100 (MQ=255)
                                                                           tccgatctgaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTa                         <  1:1784420/92‑1 (MQ=255)
                                                                            aTTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTaa                        >  1:1972554/1‑100 (MQ=255)
                                                                             ttGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAAt                       >  2:2035810/1‑100 (MQ=255)
                                                                              tGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATa                      >  2:1993441/1‑100 (MQ=255)
                                                                              tGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATa                      >  1:2521178/1‑100 (MQ=255)
                                                                              tGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATa                      >  2:2007854/1‑100 (MQ=255)
                                                                              tGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATa                      >  2:208927/1‑100 (MQ=255)
                                                                               gagagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                     >  2:1212437/1‑100 (MQ=255)
                                                                                ngagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGTCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATTTATGGTTAATAcc                    >  2:590187/2‑100 (MQ=255)
                                                                                 gagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCg                   >  1:1108484/1‑100 (MQ=255)
                                                                                   gaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTaagatcgga                 >  2:1784413/1‑93 (MQ=255)
                                                                                   gaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGtt                 >  2:64806/1‑100 (MQ=255)
                                                                                    aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg                <  1:850046/100‑1 (MQ=255)
                                                                                       aGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGaaa             <  2:1619238/100‑1 (MQ=255)
                                                                                          tACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGc          >  1:1011229/1‑100 (MQ=255)
                                                                                            cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg        >  1:1148845/1‑100 (MQ=255)
                                                                                            cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg        <  2:934345/100‑1 (MQ=255)
                                                                                            cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg        <  1:2241605/100‑1 (MQ=255)
                                                                                            cTGTAGGCCGGATAGATGATTAAATAGCATACGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg        >  2:947329/1‑100 (MQ=255)
                                                                                             tGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTgg       <  1:2288702/100‑1 (MQ=255)
                                                                                              gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt      >  1:2452878/1‑100 (MQ=255)
                                                                                              gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt      >  2:2115442/1‑100 (MQ=255)
                                                                                              gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt      >  1:346342/1‑100 (MQ=255)
                                                                                              gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt      >  1:1789596/1‑100 (MQ=255)
                                                                                              gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt      >  1:1502894/1‑100 (MQ=255)
                                                                                               tAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTc     <  2:1094657/100‑1 (MQ=255)
                                                                                               tAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTc     <  2:28960/100‑1 (MQ=255)
                                                                                               tAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTc     <  2:1280242/100‑1 (MQ=255)
                                                                                                aGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc    <  2:1789589/100‑1 (MQ=255)
                                                                                                aGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc    <  1:1848268/100‑1 (MQ=255)
                                                                                                aGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc    <  2:2519537/100‑1 (MQ=255)
                                                                                                aGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc    <  2:1095869/100‑1 (MQ=255)
                                                                                                 ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa   >  1:253382/1‑100 (MQ=255)
                                                                                                 ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa   >  2:1661919/1‑100 (MQ=255)
                                                                                                  GCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATACCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGGTGATCCat  <  2:729242‑M1/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
GCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCAT  >  NC_000913/3781600‑3781797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.