| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4008401 = | NA (NA) | 9 (0.100) | 8/164 | NT | NA | noncoding (5/34 nt) | REP289 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP289 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 4008431 = | NA (NA) | intergenic (+54/+8) | rhtC/rhtB | threonine efflux pump/homoserine, homoserine lactone and S‑methyl‑methionine efflux pump | |||||
Only 100 of 150 total aligned reads displayed.
TCTGGCGAAGTGGATTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCT > NC_000913/4008302‑4008500 | tCTGGCGAAGTGGATTGATGGTTTTGCCGGGGCGTTATCTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAg < 2:1497888/100‑1 (MQ=255) ggaccaaagcagatgaaggcgctgaataagattttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGt < 2:849232‑M1/2‑1 (MQ=255) gaccaaagcagatgaaggcgctgaataagattttcggctcgctgtttatgctggagggagcgctgttagcaccggcgaggcatgcgtgaaaaatcatGTc < 2:704527‑M1/3‑1 (MQ=255) accaaagcagatgaaggcgctgaataagattttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCg > 1:2152151‑M1/97‑100 (MQ=255) gCGAAGTGGATTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCgg < 1:1671317/100‑1 (MQ=255) gCGAAGTGGATTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCgg > 1:849236/1‑100 (MQ=255) ccaaagcagatcaaggcgctgaataagattttcggctcgttgtttatgctggtgggggcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCgg < 2:1447938‑M1/5‑1 (MQ=255) caaagcagatgaaggcgctgaataagattttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGa < 2:2044062‑M1/6‑1 (MQ=255) cGAAGTGGAGTGAGGGTTGTGCCGGGGCGTTATTTGTCGGATTTGGCATTCATGTGGTGATTTCGCGGTGATGCCAGACGCGTCTTCAGAGGATGTc > 2:2614385/1‑97 (MQ=255) aaagcagatgaaggcgctgaataagattttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGAt < 2:2521639‑M1/7‑1 (MQ=255) aGTGGATTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATaa > 1:1238284/1‑100 (MQ=255) gTGGATTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCAAGACGCGTCTTCAGAGTAAGACGGATAAg > 1:945255/1‑100 (MQ=255) ggATTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGc > 1:2195228/1‑100 (MQ=255) gATTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCg < 1:1304339/100‑1 (MQ=255) aTTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGt < 1:966864/100‑1 (MQ=255) ttGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGtt < 1:900877/100‑1 (MQ=255) ttGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGtt < 1:740185/100‑1 (MQ=255) ggtGGTTTTGGCGGGGCGTTAGTTGCCGGAGTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTa < 2:1707803/98‑1 (MQ=255) gTTTTGACGGGGCGTTATTTGCCGGATTGGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTAcgcc < 2:328532/100‑1 (MQ=255) ttttGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTAcgccg < 1:2700656/100‑1 (MQ=255) tGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCAt > 2:2702017/1‑100 (MQ=255) gCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATc > 2:472646/1‑100 (MQ=255) ccGGGGTGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATcc > 2:1145901/1‑100 (MQ=255) cGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATGCGGCGTAAAcgccttatc < 2:2382288/98‑6 (MQ=38) agattttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGAc > 1:688720‑M1/71‑100 (MQ=255) agattttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGAc > 1:1201943‑M1/71‑100 (MQ=255) ggCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATGCGGCGTAAACGCCTTATCCGAct < 2:889729/100‑2 (MQ=37) ggCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACa > 2:329425/1‑100 (MQ=255) attttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGACat > 2:576586‑M1/69‑100 (MQ=255) attttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGACat > 2:2537578‑M1/69‑100 (MQ=255) ttttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGACatt > 1:2044075‑M1/68‑100 (MQ=255) cGTTTTTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGAc < 2:2568266/97‑1 (MQ=255) gTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACatta > 1:1551633/1‑100 (MQ=255) tcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGACattatt > 1:1012582‑M1/65‑100 (MQ=255) tttGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTAtttt < 2:857188/100‑1 (MQ=255) ttGCCTGATTTGGCATTCATTTGATTATTTCGCGGTCATGCCAGACGCGTCTTCAGAGTAAGTCTGATAAGGCGTTTACGCCGCATCCGACATTAttttt < 2:1701291/100‑1 (MQ=255) ttGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTAttttt > 1:1822312/1‑100 (MQ=255) gctcgttgtttatgctggtgggagccctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGACATTAttttt > 1:1251144‑M1/62‑100 (MQ=255) tGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTc < 1:759095/100‑1 (MQ=255) gCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACCTTATTTTTCa > 2:988000/1‑100 (MQ=255) ccGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCAc < 1:1310097/100‑1 (MQ=255) ccGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCAc < 1:1797701/100‑1 (MQ=255) ccGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCAc > 1:2473778/1‑100 (MQ=255) cGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTAttttt > 2:102313/1‑96 (MQ=255) cGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCAc < 1:1423248/99‑1 (MQ=255) cGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACg > 1:2632681/1‑100 (MQ=255) cGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACg > 1:1570362/1‑100 (MQ=255) aTTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTc < 2:2215961/94‑1 (MQ=255) ttGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCatgcatgc < 1:2372733/100‑1 (MQ=255) ttGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGc < 2:2318528/100‑1 (MQ=255) tGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGcc > 1:1022341/1‑100 (MQ=255) ggCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCt > 1:2640284/1‑100 (MQ=255) cattcattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTGGGATAAGGCGTTTACGCCACATCCGACATTATTTTTCACGCATGCGTCg > 2:2290592/1‑100 (MQ=255) cattcattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCg > 2:965776/1‑100 (MQ=255) ttcattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCTACATTATTTTTCACGCATGCCTCGcc < 2:2304947/100‑1 (MQ=255) ttcattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGcc < 1:1086149/100‑1 (MQ=255) cattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGa > 1:2601610/1‑100 (MQ=255) cattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGa < 1:2103091/100‑1 (MQ=255) tGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCt > 1:2162377/1‑100 (MQ=255) atctattTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTa < 2:1151869/97‑1 (MQ=255) tattTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACa < 1:2678719/100‑1 (MQ=255) attTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTaagat > 1:1151874/1‑97 (MQ=255) attTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAg < 2:1841075/100‑1 (MQ=255) attTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAg > 1:976358/1‑100 (MQ=255) ttCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAgcg < 1:1491264/100‑1 (MQ=255) ttCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAgcg < 1:1489854/100‑1 (MQ=255) tCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAgcgc > 2:950807/1‑100 (MQ=255) tCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAgcg < 2:714943/99‑1 (MQ=255) gcgGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTc > 1:1224264/1‑100 (MQ=255) gcgGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTGTCACGCATGTCTCGCCGATGCGAACAgcg < 2:325182/97‑1 (MQ=255) cgGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTcc > 1:1951510/1‑100 (MQ=255) ggTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTccc < 1:542670/100‑1 (MQ=255) ggTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTAGTTTTCACGCATGCCACGCCGATGCTAACAGCGCTccc > 2:1855295/1‑100 (MQ=255) gATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCccacc < 1:2262064/100‑1 (MQ=255) gATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCccacc < 1:548326/100‑1 (MQ=255) tGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAg > 1:1971054/1‑100 (MQ=255) tGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAg > 1:1043397/1‑100 (MQ=255) tGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAg < 1:2448800/100‑1 (MQ=255) ccAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCa < 1:1739758/100‑1 (MQ=255) cAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCAt > 2:678372/1‑100 (MQ=255) cgcgTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaac < 2:1951501/100‑1 (MQ=255) gcgTCTTCAGAGTAAGTCGGATAAGGCGTGTACGACGCATCCGACATTATTTTTCACGCATGCCGCGCCGATGCTAACAGCGCTCCCAACAGCATAaac < 2:1350687/99‑1 (MQ=255) cgTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaacaa > 1:2502875/1‑100 (MQ=255) gTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCACAaacaac < 1:1445576/100‑1 (MQ=255) gTCTTCAGAGTAAGTCGGATAAGGCCTTCACGCCGCATCCGACGTTATGTTTCACGCATGCCTCCCCGATGCTAACAGCGCTCCCACCAGCATAaacaac < 2:1286547/100‑1 (MQ=38) tCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACg < 2:2084696/100‑1 (MQ=255) tgaaaaataatGTCGGATGCGGCGTAAACGCCTTATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGa < 2:1424404‑M1/89‑1 (MQ=255) cTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGa > 2:1195966/1‑100 (MQ=255) cTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGa > 1:2565216/1‑100 (MQ=255) cTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGa > 2:1738440/1‑100 (MQ=255) ttCAGAGTAAGTCGGATAAGGCGTTTATGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAg < 1:1241961/100‑1 (MQ=255) ttCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAg > 2:2192169/1‑100 (MQ=255) tCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTACCACCCGCATACACAACGAg > 2:1714772/1‑99 (MQ=255) ataatGTCGGATGCGGCGTAAACGCCTTATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGaa < 2:2387880‑M1/95‑1 (MQ=255) agTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGaa < 1:2046465/100‑1 (MQ=255) aaGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGaaaa > 2:423579/1‑99 (MQ=255) aaGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAAt < 1:1195971/100‑1 (MQ=255) aaGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAAt > 1:2099557/1‑100 (MQ=255) GTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCt < 1:700434‑M1/100‑1 (MQ=255) GTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCt > 1:1160636‑M1/1‑100 (MQ=255) | TCTGGCGAAGTGGATTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCT > NC_000913/4008302‑4008500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |