BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	474269 =	NA (NA)	8 (0.090)	6/166	NT	NA	intergenic (+17/+32)	amtB/tesB	ammonium transporter/acyl‑CoA thioesterase 2
*	?	NC_000913	474296 =	NA (NA)	8 (0.090)	6/166	NT	NA	intergenic (+44/+5)	amtB/tesB	ammonium transporter/acyl‑CoA thioesterase 2

Only 100 of 124 total aligned reads displayed.

CGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAA  >  NC_000913/474170‑474368

cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                     <  2:904382/100‑1 (MQ=255)

cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                     <  1:533483/100‑1 (MQ=255)

cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                     <  2:2489196/100‑1 (MQ=255)

 ggTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACa                                                                                                    >  2:299368/1‑100 (MQ=255)

  gTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAg                                                                                                   >  2:2045834/1‑100 (MQ=255)

   ttGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGc                                                                                                  >  2:687418/1‑100 (MQ=255)

    tGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGcc                                                                                                 <  1:813263/100‑1 (MQ=255)

        cTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGAc                                                                                             >  1:388180/1‑100 (MQ=255)

          gCGTGTACCGGAAGAGAAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATTACGCGTAAAAAAAAAAAAAAAAAACAGCCg                                                                                                <  2:2612774/95‑1 (MQ=255)

            gtgtACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGtt                                                                                         >  2:714079/1‑100 (MQ=255)

             tgtACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGttt                                                                                        <  1:903883/100‑1 (MQ=255)

             tgtACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAAAAAAAAAAAAAAAAAACAGCCGGACGGttt                                                                                        <  2:112398/100‑1 (MQ=255)

              gtACCGGAAGAGCAGGAGCGAGAAGGGCTGGCTGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAATCAGCCGGACGGtttt                                                                                       <  2:2353616/100‑1 (MQ=255)

               tACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGaggtgaaaa                                                                                      <  1:2318150/100‑9 (MQ=255)

                aCCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCa                                                                                     <  2:2574085/100‑1 (MQ=255)

                 ccGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCAc                                                                                    >  1:973553/1‑100 (MQ=255)

                  cGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCAcc                                                                                   >  2:2640797/1‑100 (MQ=255)

                  cGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGCAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCAcc                                                                                   <  2:1473028/100‑1 (MQ=255)

                   ggAAGAGCAGGAGCTAGTAGGGCTGTATGTCAACAGCCACTGCGAGAATGCCTATAACGCGTAACAAGCACTGCTAAAAACAGCCGGACGGTTTTCAc                                                                                    <  2:502167/98‑1 (MQ=255)

                   ggAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGTCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCt                                                                                  >  1:1209004/1‑100 (MQ=255)

                   ggAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCt                                                                                  >  1:289670/1‑100 (MQ=255)

                   ggAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCt                                                                                  >  1:1590225/1‑100 (MQ=255)

                      agagCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCg                                                                               >  2:1506416/1‑100 (MQ=255)

                      agagCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCg                                                                               <  1:1604266/100‑1 (MQ=255)

                       gagCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCgg                                                                              <  1:268979/100‑1 (MQ=255)

                        agCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGc                                                                             <  1:2212582/100‑1 (MQ=255)

                        agCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGc                                                                             <  1:1113466/100‑1 (MQ=255)

                         gCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCt                                                                            >  1:2076875/1‑100 (MQ=255)

                            ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtt                                                                         >  2:1100319/1‑100 (MQ=255)

                            ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtt                                                                         >  1:890392/1‑100 (MQ=255)

                            ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtt                                                                         >  1:262388/1‑100 (MQ=255)

                            ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtt                                                                         <  1:2670187/100‑1 (MQ=255)

                              aGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttt                                                                       <  1:1502711/100‑1 (MQ=255)

                               gCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttttt                                                                      <  1:2697259/100‑1 (MQ=255)

                               gCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttt                                                                       <  2:2659819/99‑1 (MQ=255)

                                cGAGAATGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                     <  2:61481/100‑1 (MQ=255)

                                cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                     <  1:954390/100‑1 (MQ=255)

                                cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                     <  1:1772513/100‑1 (MQ=255)

                                cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                     >  1:287441/1‑100 (MQ=255)

                                 gagaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                    >  1:1183775/1‑100 (MQ=255)

                                 gagaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                    >  2:1478498/1‑100 (MQ=255)

                                 gagaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                    <  1:1216794/100‑1 (MQ=255)

                                 ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                    >  1:1580142‑M1/67‑100 (MQ=255)

                                  caagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                   >  1:368944‑M1/66‑100 (MQ=255)

                                  agaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                   >  2:379708/1‑100 (MQ=255)

                                  agaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                   <  2:1177475/100‑1 (MQ=255)

                                    agacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAAt                                                                 >  1:1987408‑M1/64‑100 (MQ=255)

                                       ggCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgt                                                              >  2:2745819/1‑100 (MQ=255)

                                       cggcgtactggtttcctcgaccggtcagcaatgggtgatgcttaatcacaattaaaaaaaCAGCCGGACGGTGTTCACCTCCGGCTATTTTTTTAAtt                                                                >  2:2210718‑M1/61‑98 (MQ=255)

                                        gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                             <  1:2356400/100‑1 (MQ=255)

                                        gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                             <  2:1525702/100‑1 (MQ=255)

                                        gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                             >  2:886855/1‑100 (MQ=255)

                                        gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                             >  1:130339/1‑100 (MQ=255)

                                        gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTGTTCACCTCCGGCTATTTTTTTAATtgtg                                                             >  1:547858/1‑100 (MQ=255)

                                         cTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGa                                                            <  1:2254568/100‑1 (MQ=255)

                                           ggATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGAtt                                                          >  1:1953398/1‑100 (MQ=255)

                                           ggATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGAtt                                                          >  1:1149869/1‑100 (MQ=255)

                                            gATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTa                                                         <  2:1590218/100‑1 (MQ=255)

                                              tGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACg                                                       >  1:1167632/1‑100 (MQ=255)

                                                tCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCa                                                     >  1:1653712/1‑100 (MQ=255)

                                                tCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCa                                                     >  1:322685/1‑100 (MQ=255)

                                                  aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCa                                                     >  1:2480559/1‑98 (MQ=255)

                                                   aCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCa                                                  >  2:1543831/1‑100 (MQ=255)

                                                    cAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAc                                                 <  1:658621/100‑1 (MQ=255)

                                                     cctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAc                                                 >  2:2085920‑M1/47‑99 (MQ=255)

                                                        cACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCt                                             >  2:365582/1‑100 (MQ=255)

                                                          cGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCGCCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTc                                           >  1:2391579/1‑100 (MQ=255)

                                                           ggCGAGAATGCCTATAACGCGTAACAAGCGCTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTCTTTTTTTAATTGTGATTACGCATCACCCCTTcc                                          <  2:1653705/100‑1 (MQ=255)

                                                           ggCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTcc                                          <  1:2717561/100‑1 (MQ=255)

                                                               agaATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGaa                                      >  2:1290095/1‑100 (MQ=255)

                                                               agaATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGaa                                      >  2:2135177/1‑100 (MQ=255)

                                                               acaaTGCATATACCGCGAAACGAACACTCCAAAAAACAACCGGACGCCTTTCACCTCCCGCTATTTTTTGAATTGTGTTTACGCATCACCCCTTcc                                          <  2:1476811/94‑1 (MQ=255)

                                                                 aaTGCCTATAACTCGTAACAAACACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACg                                    <  2:2014604/100‑1 (MQ=255)

                                                                 aaTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACg                                    <  2:262388/100‑1 (MQ=255)

                                                                  aTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACgg                                   <  1:373428/100‑1 (MQ=255)

                                                                    gCCTATAACGCGTAACAAGCACTTCAAAAACCAGCCGGACGGTTTTCACCTCTGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTc                                 <  2:1068623/100‑1 (MQ=255)

                                                                       tataACTCGTAACCAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                              <  2:2153720/100‑1 (MQ=255)

                                                                       tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                              >  1:2736220/1‑100 (MQ=255)

                                                                       gggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                              >  1:1389837‑M1/29‑100 (MQ=255)

                                                                           aCGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCaa                          >  2:2425046/1‑100 (MQ=255)

                                                                             tcttAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAcc                        <  1:2253084/97‑1 (MQ=255)

                                                                             gtgTAACAAGCACTGCAAAAACCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTCCGCATCACCCCTTCCTGAACGGTCGAGGCAAcc                        <  2:450526/98‑1 (MQ=255)

                                                                                tAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGCGGCAACCAGt                     >  2:1925395/1‑100 (MQ=255)

                                                                                tAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAga                     >  2:2253069/1‑99 (MQ=255)

                                                                                tAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGt                     >  2:1358126/1‑100 (MQ=255)

                                                                                    aaGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGc                 <  1:423078/100‑1 (MQ=255)

                                                                                       cACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCg               <  2:1162925/99‑1 (MQ=255)

                                                                                         cTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCt            >  1:1400682/1‑100 (MQ=255)

                                                                                           gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg          <  2:1339922/100‑1 (MQ=255)

                                                                                            cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGTCGTCTTgg         >  2:2244050/1‑100 (MQ=255)

                                                                                            cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg         >  2:1242772/1‑100 (MQ=255)

                                                                                             aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        >  1:687420‑M1/7‑100 (MQ=255)

                                                                                              aaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGt       >  1:1018519‑M1/6‑100 (MQ=255)

                                                                                               aaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCGGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGta      >  2:673500‑M1/5‑100 (MQ=255)

                                                                                                aaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGAGta      <  2:1254113‑M1/96‑1 (MQ=255)

                                                                                                 aaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGtata    >  1:1100323‑M1/3‑100 (MQ=255)

                                                                                                 aaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGtata    <  2:10365‑M1/98‑1 (MQ=255)

                                                                                                   cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa  >  1:1349652/1‑100 (MQ=255)

                                                                                                   cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa  >  1:2141674/1‑100 (MQ=255)

                                                                                                   cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa  <  1:365582/100‑1 (MQ=255)

CGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAA  >  NC_000913/474170‑474368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.