BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 710940	NA (NA)	3 (0.030)	3/170	NT	NA	noncoding (33/33 nt)	REP64 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP64 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	= 710960	NA (NA)	3 (0.030)	3/170	NT	NA	coding (506/531 nt)	fldA	flavodoxin 1

Only 100 of 102 total aligned reads displayed.

CAGGTACAACAGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCTTCGTCGATAGC  >  NC_000913/710841‑711039

cAGGTACAACAGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGC                                                                                                     >  2:342349‑M1/1‑100 (MQ=255)

 aGGTACAACAGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCa                                                                                                    >  2:353796‑M1/1‑99 (MQ=255)

  ggTACAACAGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCat                                                                                                   >  2:1620630‑M1/1‑98 (MQ=255)

  ggTACAACAGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCat                                                                                                   >  1:1736531‑M1/1‑98 (MQ=255)

  ggTACAACAGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCat                                                                                                   >  2:143024‑M1/1‑98 (MQ=255)

   gtgcaacaGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCAtt                                                                                                  >  2:2036527/4‑100 (MQ=255)

     acaacaGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTAGCATTATCTATTAATACGGCGTAGACATAAGTCTACGCCGCATCACATCAGGCaatga                                                                                                <  2:2470852‑M1/100‑6 (MQ=255)

      caacaGCAAGAGTTACAAATTTGTAGCACTTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTgag                                                                                               <  2:1735353/100‑1 (MQ=255)

      caacaGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTgag                                                                                               <  1:342349/100‑1 (MQ=255)

      caacaGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTgag                                                                                               <  1:1285266/100‑1 (MQ=255)

      caacaGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTgag                                                                                               <  2:1553497/100‑1 (MQ=255)

       aacaGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTgaga                                                                                              <  1:2036539/100‑1 (MQ=255)

        acaGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGaa                                                                                             <  1:1628530/100‑1 (MQ=255)

           gCAAAAGTTACAAAGTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAAttt                                                                                          >  2:1920573/1‑100 (MQ=255)

             aaaaGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTtcg                                                                                        <  1:1424113/100‑1 (MQ=255)

              aaaGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTtcgt                                                                                       <  2:1383401/100‑1 (MQ=255)

                 gTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCga                                                                                    >  2:1326277/1‑100 (MQ=255)

                  ttACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCgag                                                                                   <  1:1049515/100‑1 (MQ=255)

                     cAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATg                                                                                <  2:1086352‑M2/100‑2 (MQ=255)

                       aaTTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCa                                                                              >  2:1577398/1‑100 (MQ=255)

                       aaTTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACAGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGCTGCa                                                                              >  2:1719807/1‑100 (MQ=255)

                        aTTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCatctcgacgaaattctcaatgcct                                                                             <  1:2024032‑M1/100‑25 (MQ=255)

                        aTTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCaa                                                                             >  1:940132/1‑100 (MQ=255)

                           tGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAActc                                                                          <  2:1811675/100‑1 (MQ=255)

                            gTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCatctcgacgaaattctcaatgcctgatg                                                                         <  1:2264295‑M1/100‑29 (MQ=255)

                             tAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCatctcgacgaaattctcaatgcctgatgt                                                                        <  1:1506875‑M1/100‑30 (MQ=255)

                              aGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGTGATGCAACTCTTc                                                                       <  1:1871199/100‑1 (MQ=255)

                               gCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCa                                                                      >  2:118912/1‑100 (MQ=255)

                                cAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAg                                                                     >  1:2495134/1‑100 (MQ=255)

                                cAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAg                                                                     <  2:1538203/100‑1 (MQ=255)

                                cAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAg                                                                     >  1:907921/1‑100 (MQ=255)

                                cAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCACGATGCAACTCTTCAg                                                                     >  2:1607301/1‑100 (MQ=255)

                                 aaTTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGa                                                                    <  2:307303/100‑1 (MQ=255)

                                 aaTTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGa                                                                    <  1:1485262/100‑1 (MQ=255)

                                 aaTTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGa                                                                    >  1:1634601/1‑100 (MQ=255)

                                 aaTTATTTGGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCCTTGAGAATTTCGTCGAGATGCAACTCTTCat                                                                     <  2:1061672/99‑2 (MQ=255)

                                   ttattTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGaaa                                                                  <  2:1789164/100‑1 (MQ=255)

                                    tattTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAAt                                                                 <  2:895158/100‑1 (MQ=255)

                                         tGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGtt                                                            >  1:314799/1‑100 (MQ=255)

                                           aTTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAGTCTGTTTa                                                          <  1:758499/100‑1 (MQ=255)

                                           aTTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTa                                                          <  2:2554579/100‑1 (MQ=255)

                                           aTTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTa                                                          >  1:1384521/1‑100 (MQ=255)

                                           aTTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTa                                                          <  2:2149252/100‑1 (MQ=255)

                                             tGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAAc                                                        <  2:2455694/100‑1 (MQ=255)

                                              ggCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAAcc                                                       <  2:697593/100‑1 (MQ=255)

                                                 aTTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCAt                                                    <  1:1912335/100‑1 (MQ=255)

                                                  ttATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCAtt                                                   <  1:935841/100‑1 (MQ=255)

                                                  ttATCTAGTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCAtt                                                   <  1:5197/100‑1 (MQ=255)

                                                     tCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCAttttt                                                >  1:1180166/1‑100 (MQ=255)

                                                      cTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTc                                               <  1:2050973/100‑1 (MQ=255)

                                                      cTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTc                                               >  2:47415/1‑100 (MQ=255)

                                                       tATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCt                                              <  2:1131190/100‑1 (MQ=255)

                                                       tATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCt                                              <  1:229506/100‑1 (MQ=255)

                                                       tATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCt                                              >  1:702334/1‑100 (MQ=255)

                                                       tATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCt                                              <  1:641442/100‑1 (MQ=255)

                                                       tATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGAAACTCTTCAGAAATCTGTTTAACCCATTTTTc                                               >  1:840508/1‑99 (MQ=255)

                                                        aTTAATACGGCGTAGACATGAGTCTACGCCTCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTa                                             >  2:2191059/1‑100 (MQ=255)

                                                        aTTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTTAGAATTTCGTCGAGATGCTACTCTTCAGAAATCTGTTTAACCCATTTTTCTa                                             <  2:1661792/100‑1 (MQ=255)

                                                         ttAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTac                                            <  2:2002294/100‑1 (MQ=255)

                                                             tACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGt                                        >  2:2528281/1‑100 (MQ=255)

                                                               cGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGtt                                       <  1:1160082/99‑1 (MQ=255)

                                                               cGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTc                                      <  1:1995149/100‑1 (MQ=255)

                                                                ggCGTAGACATGAGTCTACGCCGCATCACATTAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCa                                     >  2:1166267/1‑100 (MQ=255)

                                                                ggCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCa                                     >  1:1456139/1‑100 (MQ=255)

                                                                ggCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCa                                     >  1:296907/1‑100 (MQ=255)

                                                                 gCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAg                                    >  1:117037/1‑100 (MQ=255)

                                                                   gTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCg                                  <  1:1101698/100‑1 (MQ=255)

                                                                      gACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTc                               <  2:840504/100‑1 (MQ=255)

                                                                        cATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTTTACACTTTCAGCGGTCAg                             >  2:2322063/1‑100 (MQ=255)

                                                                        cATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAg                             >  2:379828/1‑100 (MQ=255)

                                                                        cATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAg                             >  1:1735480/1‑100 (MQ=255)

                                                                        cATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAg                             >  1:2367866/1‑100 (MQ=255)

                                                                        cATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAg                             <  1:2746893/100‑1 (MQ=255)

                                                                          tGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGtt                           <  2:751721/100‑1 (MQ=255)

                                                                             gTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCg                        >  2:2141226/1‑100 (MQ=255)

                                                                             gTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCg                        >  2:1630941/1‑100 (MQ=255)

                                                                             gTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCg                        >  2:2141134/1‑100 (MQ=255)

                                                                              tCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCgg                       <  1:1597610/100‑1 (MQ=255)

                                                                               cTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGc                      <  1:1086356/100‑1 (MQ=255)

                                                                               cTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGc                      <  1:854480/100‑1 (MQ=255)

                                                                                  cgccgcATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGa                   >  1:981140/1‑100 (MQ=255)

                                                                                  cgccgcATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTGTCTACACGTTCAGCGGTCAGTTCCGGCTg                    >  2:1075887/1‑99 (MQ=255)

                                                                                    ccgcATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTATATTTTCATCGGTCAGTTCCGGCTGACg                 >  2:2206902/1‑100 (MQ=255)

                                                                                     cgcATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACgg                <  1:940139/100‑1 (MQ=255)

                                                                                      gtatcacatcaGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGt               >  1:2261130/3‑100 (MQ=255)

                                                                                        atcacatcaGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCt             <  1:1678030/100‑1 (MQ=255)

                                                                                          cacatcaGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCt             >  1:1977418/1‑98 (MQ=255)

                                                                                           acatcaGGCATTGAGAATTTCGTCGAGATgcctgatgtgatgcggcgtagactcatgtctacgccgtattaatagataatgccaatcaaaataattgcta          <  1:1506875‑M2/100‑72 (MQ=255)

                                                                                            catcaGGCATTGAGAATTTCGTCGAGATgcctgatgtgatgcggcgtagactcatgtctacgccgtattaatagataatgccaatcaaaataattgctac         <  1:2264295‑M2/100‑73 (MQ=255)

                                                                                            catcaGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCTtcgt         <  2:1423695/100‑1 (MQ=255)

                                                                                             atcaGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCTtcgtc        <  1:530960/100‑1 (MQ=255)

                                                                                             atcaGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCTtcgtc        <  2:1634594/100‑1 (MQ=255)

                                                                                              tcaGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCTtcgtcg       <  1:34633/100‑1 (MQ=255)

                                                                                              tcaGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCTtcgtcg       <  1:34634/100‑1 (MQ=255)

                                                                                               caGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCTTCGTCGa      >  1:1236495/1‑100 (MQ=255)

                                                                                               caGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCATACGATCTTCGTCGa      >  1:2329913/1‑100 (MQ=255)

                                                                                                aGGCATTGAGAATTTCGTCGAGATgcctgatgtgatgcggcgtagactcatgtctacgccgtattaatagataatgccaatcaaaataattgctacaaat     <  1:2024032‑M2/100‑77 (MQ=255)

                                                                                                  gCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCTTCGTCGATAg   <  1:1269212/100‑1 (MQ=255)

                                                                                                   catctcgacgaaattctcaatgcctgatgtgatgcggcgtagactcatgtctacgccgtattaatagataatgccaatcaaaataattgctacaaatttg  <  2:1086352‑M1/100‑100 (MQ=255)

                                                                                                   cATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCTTCGTCGATAGc  <  1:1323918/100‑1 (MQ=255)

CAGGTACAACAGCAAAAGTTACAAATTTGTAGCAATTATTTTGATTGGCATTATCTATTAATACGGCGTAGACATGAGTCTACGCCGCATCACATCAGGCATTGAGAATTTCGTCGAGATGCAACTCTTCAGAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCCGGCTGACGGTCTTCGTCGATAGC  >  NC_000913/710841‑711039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.