New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 715331NA (NA)6 (0.070) 4/164 NT NA noncoding (68/98 nt) RIP65 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP65 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 984361 = NA (NA)noncoding (1/98 nt) RIP86 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP86 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 115 total aligned reads displayed.

CGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAGGAGTC  >  NC_000913/715232‑715430
                                                                                                   |                                                                                                   
cGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAg                                                                                                     >  2:1576130/1‑100 (MQ=255)
cGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAg                                                                                                     <  1:2506069/100‑1 (MQ=255)
 gCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGg                                                                                                    <  2:1895625‑M1/100‑2 (MQ=255)
  cccTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGgc                                                                                                   <  1:1236964‑M1/100‑3 (MQ=255)
   ccTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGgcc                                                                                                  >  1:1126218‑M1/1‑97 (MQ=255)
   ccTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGgcc                                                                                                  <  2:338994‑M1/100‑4 (MQ=255)
     ttttttACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGgccgg                                                                                                <  1:515836‑M1/100‑6 (MQ=255)
         ttACGTATGACAAACACAGAATTGCCTGATGTGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATaa                                                                                            >  2:1989767/1‑100 (MQ=255)
           aCGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAgg                                                                                          <  2:1101617/100‑1 (MQ=255)
            cGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGc                                                                                         <  1:679414/100‑1 (MQ=255)
            cGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGc                                                                                         <  1:1554361/100‑1 (MQ=255)
             ataagataaaCACAGAATTGCCTAATGCGCTACGCTTATTAGGGCTACGATGATGGTGCAATCTATTGAATTTATGCGATTTTTTAGGCCGGTTAAggtg                                                                                        >  2:1406887/8‑98 (MQ=18)
              tATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGt                                                                                       >  1:2427303/1‑100 (MQ=255)
               aTGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGtt                                                                                      >  1:946998/1‑100 (MQ=255)
               aTGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGtt                                                                                      <  1:60521/100‑1 (MQ=255)
                tGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGgccggatgcggcgtga                                                                                     >  2:2363903‑M1/1‑84 (MQ=255)
                tGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTc                                                                                     <  2:2297011/100‑1 (MQ=255)
                tGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTc                                                                                     <  1:1809098/100‑1 (MQ=255)
                tGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTc                                                                                     <  2:1364754/100‑1 (MQ=255)
                  aCAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCa                                                                                    <  2:318580/99‑1 (MQ=255)
                   cAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcg                                                                                  >  2:2212589/1‑100 (MQ=255)
                     aaCACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgcc                                                                                <  2:2303179/100‑1 (MQ=255)
                     aaCACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgcc                                                                                <  1:1678835/100‑1 (MQ=255)
                     aaCACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgcc                                                                                >  1:2103739/1‑100 (MQ=255)
                      acacAGAATTGCCTGTTGCGCTACGTTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgccg                                                                               <  2:2485266/100‑1 (MQ=255)
                      acacAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgccg                                                                               <  2:2375752/100‑1 (MQ=255)
                       cacaGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgccgc                                                                              >  2:2696720/1‑100 (MQ=255)
                       cacaGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgccgc                                                                              >  1:2399067/1‑100 (MQ=255)
                         caGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCAt                                                                            >  1:3134/1‑100 (MQ=255)
                         caGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCACAt                                                                            >  2:857068/1‑100 (MQ=255)
                           gAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                                          <  2:2022965/100‑1 (MQ=255)
                              ttGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGgccggatgcggcgtgaacgccttatccggc                                                                       <  1:738868‑M1/100‑31 (MQ=255)
                              ttGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGgccggatgcggcgtgaacgccttatccggc                                                                       <  2:472157‑M1/100‑31 (MQ=255)
                              ttGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                                       <  2:2631409/100‑1 (MQ=255)
                               tGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGgccggatgcggcgtgaacgccttatccggcc                                                                      <  1:1286329‑M1/100‑32 (MQ=255)
                               tGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGgccggatgcggcgtgaacgccttatccggcc                                                                      <  2:1190834‑M1/100‑32 (MQ=255)
                                gCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa                                                                     >  1:1737014/1‑100 (MQ=255)
                                  cTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaaaa                                                                   <  2:1360403/100‑1 (MQ=255)
                                  cTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaaaa                                                                   >  1:2729705/1‑100 (MQ=255)
                                  cTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATCGTGTAGgcccgatgcggcgtgaacgccttatccgg                                                                        <  2:839424‑M1/95‑30 (MQ=255)
                                   tGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGgccggatgcggcgtgaacgccttatccggcctaca                                                                  <  1:2363918‑M1/100‑36 (MQ=255)
                                     aTGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATGTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaaca                                                                <  1:140164/100‑1 (MQ=255)
                                      tGCGCTACGCTTATCAGGCCTACGAAGATGGTGCAATAAATGGAATTTAAGCGATTAAGTAGGCCGGATAAGGCGATCACGCCGCATACGGCAAAaacaa                                                               >  2:955348/1‑100 (MQ=18)
                                        cgcTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACg                                                             <  1:2507391/100‑1 (MQ=255)
                                         gcTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACgn                                                            <  2:1729165/100‑2 (MQ=255)
                                          cTACGCTTATCAGGCCTACGAGGGTGGTGCAATATCTCGAATTTAACCGATTTTGAAGGCGGGATAAGGAGCTCACGACGCATCAGGCAAAAACAACgca                                                           >  2:1849311/1‑98 (MQ=18)
                                          cTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGaa                                                           >  2:1283193/1‑100 (MQ=255)
                                           tACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAac                                                          <  1:1038787/100‑1 (MQ=255)
                                            aCGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAacn                                                         <  2:2451382/100‑2 (MQ=255)
                                             cGCTTATCAGGCCTACGAGGATGGTGTAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAacac                                                        >  1:1669060/1‑100 (MQ=255)
                                             cGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAacac                                                        >  2:2204483/1‑100 (MQ=255)
                                             cGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAacac                                                        >  2:2403705/1‑100 (MQ=255)
                                               cTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACtt                                                      >  2:2115141/1‑100 (MQ=255)
                                               cTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACtt                                                      >  2:1327409/1‑100 (MQ=255)
                                                  aTCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGt                                                   >  1:718430/1‑100 (MQ=255)
                                                  aTCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGt                                                   <  1:2040653/100‑1 (MQ=255)
                                                   tCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTc                                                  <  1:511969/100‑1 (MQ=255)
                                                   tCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTc                                                  <  1:2722415/100‑1 (MQ=255)
                                                    cAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTca                                                 <  1:502879/100‑1 (MQ=255)
                                                    cAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTca                                                 >  2:383461/1‑100 (MQ=255)
                                                    cAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTca                                                 <  1:111707/100‑1 (MQ=255)
                                                      ggCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTcaac                                               >  1:359598/1‑100 (MQ=255)
                                                       gCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTcaaca                                              <  2:1327717/100‑1 (MQ=255)
                                                       gCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTcaaca                                              <  1:1574513/100‑1 (MQ=255)
                                                         cTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACaaa                                            <  1:764259/100‑1 (MQ=255)
                                                          tACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAAc                                           <  2:962150/100‑1 (MQ=255)
                                                            cGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTg                                         >  2:2273091/1‑100 (MQ=255)
                                                             gAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGa                                        <  2:369634/100‑1 (MQ=255)
                                                              aGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAg                                       <  1:2212604/100‑1 (MQ=255)
                                                              aGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAg                                       <  1:1172009/100‑1 (MQ=255)
                                                              aGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAg                                       >  1:62726/1‑100 (MQ=255)
                                                               ggATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGt                                      <  2:157366/100‑1 (MQ=255)
                                                                gATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTa                                     <  1:1241120/100‑1 (MQ=255)
                                                                gATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTa                                     <  1:1788338/100‑1 (MQ=255)
                                                                gATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCACATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTa                                     <  1:857072/100‑1 (MQ=255)
                                                                   ggTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCt                                  >  1:1720737/1‑100 (MQ=255)
                                                                   ggTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCt                                  >  1:1949530/1‑100 (MQ=255)
                                                                   ggTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCt                                  >  2:2641770/1‑100 (MQ=255)
                                                                    gTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTc                                 >  1:2525305/1‑100 (MQ=255)
                                                                      gCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCaa                               >  2:1892185/1‑100 (MQ=255)
                                                                        aaTATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAgg                             <  2:803516/100‑1 (MQ=255)
                                                                        aaTATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAgg                             <  2:579503/100‑1 (MQ=255)
                                                                        aaTATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAgg                             <  2:1870155/100‑1 (MQ=255)
                                                                           atatTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGaaa                          >  1:1501750/1‑100 (MQ=255)
                                                                              ttGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATcc                       >  1:1953744/1‑100 (MQ=255)
                                                                               tGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATccc                      >  2:191590/1‑100 (MQ=255)
                                                                               tGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATccc                      <  2:1764415/100‑1 (MQ=255)
                                                                                gAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCa                     >  2:1922223/1‑100 (MQ=255)
                                                                                  aTTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAAt                   >  1:2432914/1‑100 (MQ=255)
                                                                                  aTTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAAt                   <  1:1542386/100‑1 (MQ=255)
                                                                                     tAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGaa                >  2:861686/1‑100 (MQ=255)
                                                                                      aaGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAg               <  1:2641788/100‑1 (MQ=255)
                                                                                      aaGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAg               <  2:1851317/100‑1 (MQ=255)
                                                                                         cGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGAcc            <  1:2014730/100‑1 (MQ=255)
                                                                                         cGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGAcc            >  1:706069/1‑100 (MQ=255)
                                                                                            ttttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAAc         >  1:320370/1‑100 (MQ=255)
                                                                                              ttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAg       <  1:1481380/100‑1 (MQ=255)
                                                                                               tGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAgg      <  1:1576137/100‑1 (MQ=255)
                                                                                               tGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAgg      <  2:191124/100‑1 (MQ=255)
                                                                                                   ggCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAGGAGTc  <  1:2507153/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAGGAGTC  >  NC_000913/715232‑715430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.