New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3255175 =NA (NA)4 (0.040) 4/168 NT NA coding (133/165 nt) yhaL uncharacterized protein
?NC_000913 3255206 = NA (NA)coding (164/165 nt) yhaL uncharacterized protein

Only 100 of 123 total aligned reads displayed.

GTGAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATT  >  NC_000913/3255076‑3255274
                                                                                                   |                                                                                                   
ggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtcttta                                                                                                     >  1:1226495‑M1/100‑100 (MQ=255)
ggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtcttta                                                                                                     <  1:2104013‑M1/1‑1 (MQ=255)
ggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtcttta                                                                                                     <  2:2717691‑M1/1‑1 (MQ=255)
   gcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtctttAcgc                                                                                                  >  2:500698‑M1/97‑100 (MQ=255)
    catcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtctttAcgcg                                                                                                 >  2:1302502‑M1/96‑100 (MQ=255)
    aGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAAcgcg                                                                                                 >  1:1337892/1‑100 (MQ=255)
    aGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAAcgcg                                                                                                 >  2:1564697/1‑100 (MQ=255)
    aGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAAcgcg                                                                                                 <  2:1865171/100‑1 (MQ=255)
    aGCCCGTGGTGACGAAAGAACTAGCACGCACTGCCAGAAAAAGTGGCTATGAAGAGATGTTGAGCGAGCTGGAGGCTATCGTCGCGGGTTCTGAAAcgcg                                                                                                 >  2:661937/1‑100 (MQ=255)
     gCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGGTGCTGAAACGCGt                                                                                                <  2:1101112/100‑1 (MQ=255)
      cccGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGtt                                                                                               <  1:252298/100‑1 (MQ=255)
        ctttgtggCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTTGAAGCTATCGTCGCGGATGCTGAAACGCGttt                                                                                              <  2:146078/95‑1 (MQ=255)
           ggtggCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGcc                                                                                          >  2:1502853/1‑100 (MQ=255)
           ggtggCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGcc                                                                                          >  1:2055823/1‑100 (MQ=255)
           ggtggCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGACGCGGATGCTGAAACGCGTTTAGcc                                                                                          >  2:1404691/1‑100 (MQ=255)
              ggCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAg                                                                                       <  1:969987/100‑1 (MQ=255)
               gCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAgg                                                                                      <  1:1119272/100‑1 (MQ=255)
                cGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGa                                                                                     >  1:545845/1‑100 (MQ=255)
                cGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGa                                                                                     <  1:2009505/100‑1 (MQ=255)
                cGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGa                                                                                     >  1:120788/1‑100 (MQ=255)
                    aGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGaa                                                                                 <  1:1751810/100‑1 (MQ=255)
                     ggaCCTGCTCGCACCGGCGAAAATTGTGGCGATGAAGAGATGTTGAGCGATCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAg                                                                                       <  2:2619023/91‑1 (MQ=255)
                     gAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAg                                                                                <  1:1883673/100‑1 (MQ=255)
                       aCCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCt                                                                              <  1:2194167/100‑1 (MQ=255)
                       aCCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCt                                                                              >  1:53858/1‑100 (MQ=255)
                        ccTGCTCGCACCGCCAAAAATTTTGGGTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTa                                                                             >  1:1674021/1‑100 (MQ=255)
                        ccTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTa                                                                             >  1:2271733/1‑100 (MQ=255)
                         cTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTa                                                                             <  1:171806/99‑1 (MQ=255)
                          tctcttcatagCCAAAATTTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTAcc                                                                           >  1:2088309/11‑100 (MQ=255)
                          tGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTAcc                                                                           >  1:2479516/1‑100 (MQ=255)
                              cGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGt                                                                       <  1:1109046/100‑1 (MQ=255)
                               gCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTa                                                                      <  1:575552/100‑1 (MQ=255)
                                ttcgttaatgttgttgggttttgtaggccggataaggcgttttcgccgcatccggcaacctgtctttACGCGTTTAGCCGAGGATGAAGCTACCGCGTaa                                                                     >  1:2283198‑M1/68‑100 (MQ=255)
                                cACCGCCAAAGATTTTGAATATGAAGAGAGGTTGGGCGCGCTGAAAGCGATCGCCGCGGACGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTaa                                                                     <  2:500223/100‑1 (MQ=255)
                                cACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTaa                                                                     >  2:238790/1‑100 (MQ=255)
                                 tcgttaatgttgttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtctttACGCGTTTAGCCGAGGATGAAGCTACCGCGTaaa                                                                    >  1:1834479‑M1/67‑100 (MQ=255)
                                   gttaatgttgttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtctttACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGa                                                                  >  2:1310876‑M1/65‑100 (MQ=255)
                                     taatgttgttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtctttACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACa                                                                >  1:1321614‑M1/63‑100 (MQ=255)
                                      cAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAg                                                               >  2:529909/1‑100 (MQ=255)
                                      cAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAg                                                               >  2:1156280/1‑100 (MQ=255)
                                      cAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAg                                                               >  1:525859/1‑100 (MQ=255)
                                        aaaaTTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGt                                                             <  2:1087175/100‑1 (MQ=255)
                                           aTTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGc                                                          <  1:1344598/100‑1 (MQ=255)
                                             tttGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCg                                                        >  1:2289264/1‑100 (MQ=255)
                                              ttGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCgg                                                       <  2:1938374/100‑1 (MQ=255)
                                              ttGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCgg                                                       <  2:2427004/100‑1 (MQ=255)
                                                  cTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGt                                                             >  2:2203484/1‑90 (MQ=255)
                                                   tATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTCGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGAGgc                                                   >  1:895999/1‑99 (MQ=255)
                                                   tATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcg                                                  >  1:1572157/1‑100 (MQ=255)
                                                    aTGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcgg                                                 <  2:2612792/100‑1 (MQ=255)
                                                    aTGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcgg                                                 >  1:1549905/1‑100 (MQ=255)
                                                     tGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcggc                                                >  1:2038492/1‑100 (MQ=255)
                                                     tGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcggc                                                <  2:2327200/100‑1 (MQ=255)
                                                     tGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcggc                                                >  1:1577783/1‑100 (MQ=255)
                                                     tGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcggc                                                <  2:1038513/100‑1 (MQ=255)
                                                        agagATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGaa                                             >  2:840413/1‑100 (MQ=255)
                                                           gaTGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAAc                                          <  1:2222026/100‑1 (MQ=255)
                                                            aTGTTGAGCGAGCTTGAAGCTATCGTCGCGGATGCTGAAACGCGTTTTGCCGAGGATGAATCTACCGCGTCAAGACAGGTTGCCGGATgcggcg                                               <  2:2161667/94‑1 (MQ=255)
                                                             tGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGc                                        >  1:1217747/1‑100 (MQ=255)
                                                              gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTCCCGCGTAAAGACAGGTTGCCGGATTCGGCGAAAACGcc                                       <  2:1699187/100‑1 (MQ=255)
                                                              gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACTGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                       <  1:1940610/100‑1 (MQ=255)
                                                              gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                       <  2:2038479/100‑1 (MQ=255)
                                                              gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                       <  2:53858/100‑1 (MQ=255)
                                                              gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                       >  1:581294/1‑100 (MQ=255)
                                                              gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                       <  1:1478533/100‑1 (MQ=255)
                                                              gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                       <  1:2587926/100‑1 (MQ=255)
                                                               ttGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCt                                      >  2:348861/1‑100 (MQ=255)
                                                               ttGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCt                                      >  2:2552194/1‑100 (MQ=255)
                                                               ttGAGCGAGCTGGAAGCGATCGTCGCGGATGCTGAAGCGCGTTTAGCCGAGGATGGAGCAACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                       <  2:1469866/99‑1 (MQ=255)
                                                                tGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCtt                                     >  1:2182168/1‑100 (MQ=255)
                                                                   gcgagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATc                                  <  1:184714/100‑1 (MQ=255)
                                                                        cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                             >  1:2460593/1‑100 (MQ=255)
                                                                        cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                             >  2:225405/1‑100 (MQ=255)
                                                                        cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                             <  1:1550819/100‑1 (MQ=255)
                                                                        cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                             <  1:3912/100‑1 (MQ=255)
                                                                        cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                             <  2:622130/100‑1 (MQ=255)
                                                                        cTGGAAGCTATCGGCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                             <  2:247815/100‑1 (MQ=255)
                                                                          ggAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTa                           >  1:819393/1‑100 (MQ=255)
                                                                            aaGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACa                         <  1:655950/100‑1 (MQ=255)
                                                                              gCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACaaa                       <  2:1996337/100‑1 (MQ=255)
                                                                                  ctgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATcc                   <  2:302808/98‑1 (MQ=255)
                                                                                  ctgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATcc                   <  2:1196630/98‑1 (MQ=255)
                                                                                   cgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca                  <  2:7456/100‑1 (MQ=255)
                                                                                    gtcgCGGATTCTTAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca                  <  2:2356605/99‑1 (MQ=255)
                                                                                    gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcag                 >  1:302808/1‑99 (MQ=255)
                                                                                    gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaa                 >  1:2460319/1‑100 (MQ=255)
                                                                                     tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac                <  2:1781875/100‑1 (MQ=255)
                                                                                     tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac                <  1:1079568/100‑1 (MQ=255)
                                                                                      cgcgGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaaca               >  1:1657575/1‑100 (MQ=255)
                                                                                          gATGCTGAAACGCGTTTAGCCGAGGATGAATCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACAt           <  2:1189416/100‑1 (MQ=255)
                                                                                           aTGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACAtt          >  1:127706/1‑100 (MQ=255)
                                                                                           aTGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACAtt          >  2:1896441/1‑100 (MQ=255)
                                                                                              cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTaa        >  1:1034225/1‑99 (MQ=255)
                                                                                              cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc       >  1:1334791/1‑100 (MQ=255)
                                                                                                gAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAACCTCCTTGTTCGGCCTACTACATCCAACAACATTAACGa     >  1:1656996/1‑100 (MQ=255)
                                                                                                gAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGa     >  1:2992/1‑100 (MQ=255)
                                                                                                 aaaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGaa    >  1:1006631/1‑100 (MQ=255)
                                                                                                  aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAACATCCAACAACATTAACGaa    <  2:1660482/99‑1 (MQ=255)
                                                                                                  aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAAt   <  1:2500674/100‑1 (MQ=255)
                                                                                                   ACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAAtt  >  1:713039‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GTGAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATT  >  NC_000913/3255076‑3255274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.