New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4332016NA (NA)4 (0.040) 4/160 NT NA noncoding (3/32 nt) REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4332045 NA (NA)noncoding (32/32 nt) REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 124 total aligned reads displayed.

CCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAC  >  NC_000913/4331946‑4332144
                                                                                                   |                                                                                                   
ccGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCGGCGAACTGATGAAAAGGATGAAACGGATGAACTGGTGTGACGCTGTCGTATCAGGcc                                                                                                     >  2:348819/1‑100 (MQ=255)
ccGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCC                                                                                                     >  1:1365256‑M2/1‑100 (MQ=255)
ccGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCC                                                                                                     <  1:1567714‑M2/100‑1 (MQ=255)
   aTTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAAt                                                                                                  <  1:2088223/100‑1 (MQ=255)
     ttGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTg                                                                                                <  1:2492306/100‑1 (MQ=255)
      tGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGa                                                                                               >  1:2385961/1‑100 (MQ=255)
        cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGaa                                                                                              >  2:926553/1‑99 (MQ=255)
        cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                             <  1:583192/100‑1 (MQ=255)
         aGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAct                                                                                            <  2:1850251/100‑1 (MQ=255)
             gAAACGTACCCGCCTGGTACAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTa                                                                                        >  1:1970268/1‑100 (MQ=255)
                aCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAgg                                                                                     <  1:240293/100‑1 (MQ=255)
                 cGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGt                                                                                    <  2:535926/100‑1 (MQ=255)
                  gTACCCGCCTGGTGCAGCAACATCCGGGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGtt                                                                                   >  1:1678997/1‑100 (MQ=255)
                   tACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTc                                                                                  >  2:2257206/1‑100 (MQ=255)
                    aCCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCa                                                                                 >  1:1214106/1‑100 (MQ=255)
                     cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCa                                                                                 >  1:1031819/1‑99 (MQ=255)
                     cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                >  2:179596/1‑100 (MQ=255)
                     cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                <  2:2464049/100‑1 (MQ=255)
                      ccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACt                                                                               <  1:2574387/100‑1 (MQ=255)
                       cGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACtt                                                                              >  2:1868566/1‑100 (MQ=255)
                          cTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTaa                                                                            >  2:220630/1‑99 (MQ=255)
                           tGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtc                                                                          <  1:2059343/100‑1 (MQ=255)
                              tGCAGCAATATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATctct                                                                       <  2:1168467/100‑1 (MQ=255)
                               gcagcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTg                                                                      <  1:291906/100‑1 (MQ=255)
                                cagcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGa                                                                     <  2:1161643/100‑1 (MQ=255)
                                 agcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAc                                                                    >  2:476927/1‑100 (MQ=255)
                                  gcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGCTGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAc                                                                    >  2:1481459/1‑99 (MQ=255)
                                  gcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcg                                                                   >  1:766616/1‑100 (MQ=255)
                                  gcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcg                                                                   >  1:1878748/1‑100 (MQ=255)
                                    aaCATCCGCTAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcgcg                                                                 <  2:2597586/100‑1 (MQ=255)
                                    aaCATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcgcg                                                                 >  2:474198/1‑100 (MQ=255)
                                      cATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCa                                                               <  2:1589074/100‑1 (MQ=255)
                                      cATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCa                                                               >  1:2248492/1‑100 (MQ=255)
                                      cATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCa                                                               <  1:2195743/100‑1 (MQ=255)
                                      cATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCa                                                               <  1:521037/100‑1 (MQ=255)
                                        tCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCaca                                                             <  1:1813159/100‑3 (MQ=255)
                                         ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGATCTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                            >  2:1451245/1‑100 (MQ=255)
                                         ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                            >  1:1842902/1‑100 (MQ=255)
                                         ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                            >  2:1005246/1‑100 (MQ=255)
                                          cgcgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAct                                                           >  1:2541701/1‑100 (MQ=255)
                                           gcgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATActc                                                          >  2:613351/1‑100 (MQ=255)
                                           gcgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATActc                                                          >  1:307750/1‑100 (MQ=255)
                                            cgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATActct                                                         <  2:910144/100‑1 (MQ=255)
                                              aaTTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcc                                                       <  2:1326045/100‑1 (MQ=255)
                                                ttGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcctc                                                     >  2:842265/1‑100 (MQ=255)
                                                 tgatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCtcctcc                                                    <  1:1078175/100‑1 (MQ=255)
                                                  gatgaATAAGCTGAAACGGATTGCCTGATGGGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCtcctcc                                                    <  2:1857362/99‑1 (MQ=255)
                                                   atgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCGTACTCtcctccgg                                                  <  1:1868574/100‑3 (MQ=255)
                                                    tgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCtcctccgtt                                                 >  2:1585592/1‑97 (MQ=255)
                                                    tgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAgg                                                 >  1:2013234/1‑100 (MQ=255)
                                                       aTAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTa                                              >  1:2651574/1‑100 (MQ=255)
                                                        tAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTaa                                             <  2:2541683/100‑1 (MQ=255)
                                                         aaGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCatccgtttcagcttattcatcaattcgcggatgttgctgcaccaggcgggtacgttt                                            <  2:2086407‑M2/100‑58 (MQ=255)
                                                         aaGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTCAc                                            >  1:2244275/1‑100 (MQ=255)
                                                          aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACg                                           >  1:313881/1‑100 (MQ=255)
                                                           gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgg                                          <  2:706894/100‑1 (MQ=255)
                                                           gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgg                                          <  2:2108307/100‑1 (MQ=255)
                                                           gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgg                                          <  2:637286/100‑1 (MQ=255)
                                                            ntGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgga                                         >  1:1844009/2‑100 (MQ=255)
                                                            cTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgga                                         >  1:1990717/1‑100 (MQ=255)
                                                             tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggag                                        >  2:1317379/1‑100 (MQ=255)
                                                             tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggag                                        >  2:2113914/1‑100 (MQ=255)
                                                              gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGACCTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggagg                                       <  2:2203734/100‑1 (MQ=255)
                                                              gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggagg                                       <  1:741010/100‑1 (MQ=255)
                                                               aaaCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggagga                                      >  2:2727051/1‑100 (MQ=255)
                                                                  cGGATGGCCTGATGTGACGCTGTCTTATCAGGCCatccgtttcagcttattcatcaattcgcggatgttgctgcaccaggcgggtacgtttcgcctgcaa                                   <  1:1148717‑M2/100‑67 (MQ=255)
                                                                  cGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGagag                                   <  1:398491/100‑1 (MQ=255)
                                                                   ggATGGCCTGATGTGACGCTGTCTTATCAGGCCatccgtttcagcttattcatcaattcgcggatgttgctgcaccaggcgggtacgtttcgcctgcaaa                                  <  1:64696‑M2/100‑68 (MQ=255)
                                                                   ggATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGt                                  >  1:819753/1‑100 (MQ=255)
                                                                    gATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTg                                 <  2:313881/100‑1 (MQ=255)
                                                                     aTGGCCTGATGTGACGCTGTCTTATCAGGCCatccgtttcagcttattcatcaattcgcggatgttgctgcaccaggcgggtacgtttcgcctgcaaatc                                <  1:2096499‑M2/100‑70 (MQ=255)
                                                                     aTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGc                                <  2:720986/100‑1 (MQ=255)
                                                                         ccTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATg                            >  2:1272948/1‑100 (MQ=255)
                                                                         ccTGATGTGACGCTGACTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATg                            <  1:2700183/100‑1 (MQ=255)
                                                                          cTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGa                           >  1:1473084/1‑100 (MQ=255)
                                                                           tGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGaa                          <  1:752483/100‑1 (MQ=255)
                                                                              tgccaCGCTGTCTTAACGGGCCAAATTAACTCTTAAGGTAGACTTAGTCACTTACGCGCAGACTTTCCCTGAGGTTAACTGAGGAGAGTGCAATGaaaaa                       <  2:2344862/96‑1 (MQ=255)
                                                                                tgACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAAcc                     >  1:1707307/1‑100 (MQ=255)
                                                                                tgACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAAcc                     >  1:2463744/1‑100 (MQ=255)
                                                                                 gACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAGAACCg                    >  1:800480/1‑100 (MQ=255)
                                                                                 gACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCg                    >  1:1785074/1‑100 (MQ=255)
                                                                                 gACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCg                    <  1:2144522/100‑1 (MQ=255)
                                                                                   cGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCgtg                  <  2:1616117/100‑1 (MQ=255)
                                                                                     cTGTCTTATCATGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGATGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCgtg                  <  2:854349/98‑1 (MQ=255)
                                                                                      tGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGGAAAACCGTGttt               <  2:1593982/100‑1 (MQ=255)
                                                                                       gTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTa              >  2:2534002/1‑100 (MQ=255)
                                                                                        tCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTAt             <  1:1248851/100‑1 (MQ=255)
                                                                                         cTTATCCGGCCAATTGAACTCTTAAGGTTCACTTGATCTCTGACGCTCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGttt               >  2:544113/1‑97 (MQ=255)
                                                                                            aTCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaaa         >  2:2425773/1‑100 (MQ=255)
                                                                                             tCAGGCCatccgtttcagcttattcatcaattcgcggatgttgctgcaccaggcgggtacgtttcgcctgcaaatcggcaatctcgtggtcaatatcatc        <  1:2266101‑M2/100‑94 (MQ=255)
                                                                                             tCAGGCCatccgtttcagcttattcatcaattcgcggatcttgctgcaccagtcgggtacgtttcgcctgcaaatcggcaatctcgtggtcaatatcatc        >  2:1316514‑M2/1‑7 (MQ=255)
                                                                                              cAGGCCatccgtttcagcttattcatcaattcgcggatgttgctgcaccaggcgggtacgtttcgcctgcaaatcggcaatctcgtggtcaatatcatcg       >  2:1540781‑M2/1‑6 (MQ=255)
                                                                                              cAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGt       <  2:1441497/100‑1 (MQ=255)
                                                                                                ggCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt     >  1:610877/1‑100 (MQ=255)
                                                                                                ggCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt     >  2:2061359/1‑100 (MQ=255)
                                                                                                ggCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt     >  1:1256294/1‑100 (MQ=255)
                                                                                                 gCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTa    <  2:2248477/100‑1 (MQ=255)
                                                                                                  ccAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTaa   <  1:2697039/100‑1 (MQ=255)
                                                                                                  ccAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTaa   <  1:2645574/100‑1 (MQ=255)
                                                                                                   cAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAc  <  1:699766/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAC  >  NC_000913/4331946‑4332144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.