New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4344813 =NA (NA)5 (0.060) 5/160 NT NA intergenic (+23/+116) melB/yjdF melibiose:sodium symporter/DUF2238 family inner membrane protein
?NC_000913 4344842 = NA (NA)noncoding (28/95 nt) RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 118 total aligned reads displayed.

GTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTT  >  NC_000913/4344743‑4344938
                                                                                                   |                                                                                                
gTTCATGCTGATATTCCGGTCGGTGCCGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCAc                                                                                                  >  2:326623/1‑100 (MQ=255)
gTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCAc                                                                                                  >  2:2246083/1‑100 (MQ=255)
gTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCAc                                                                                                  >  2:1380500/1‑100 (MQ=255)
  gccggatgcggcgtgaattcctgatccggtctacaaaatttgcagatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCAc                                                                                                  >  2:414503‑M1/69‑98 (MQ=255)
   ccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGt                                                                                                >  2:1226547‑M1/68‑99 (MQ=255)
   ccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGTc                                                                                               >  1:2502196‑M1/68‑100 (MQ=255)
    aTGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCt                                                                                              <  2:2141536/100‑1 (MQ=255)
     tGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCtt                                                                                             <  1:96649/100‑1 (MQ=255)
      gCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTta                                                                                            <  2:734222/100‑1 (MQ=255)
        tGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaat                                                                                          <  2:1551345/100‑1 (MQ=255)
        tGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaat                                                                                          >  2:1293020/1‑100 (MQ=255)
        tGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaat                                                                                          >  2:1309306/1‑100 (MQ=255)
        tGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaat                                                                                          <  1:1366439/100‑1 (MQ=255)
          cggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgt                                                                                        >  1:1790041‑M1/61‑100 (MQ=255)
           tatTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgta                                                                                       >  1:622741/1‑100 (MQ=255)
            atTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgtaa                                                                                      <  1:2304272/100‑1 (MQ=255)
                cggtcgttGCAGTGAGTGATGTGAAACCCTAACGTGGACAATATCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgtaatg                                                                                    <  2:555586/98‑1 (MQ=255)
                  gtcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGGGAATGGCGTGATGCGATATGTTTATCAGGCGACGTCTTAATGTAATGCttt                                                                                >  2:1229833/1‑100 (MQ=255)
                   tcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTg                                                                               <  2:2085832/100‑1 (MQ=255)
                   tcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTg                                                                               <  2:2654997/100‑1 (MQ=255)
                    cggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTgg                                                                              <  1:1081962/100‑1 (MQ=255)
                         cAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAt                                                                            <  2:1838134/97‑1 (MQ=255)
                          agtgagtgATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGc                                                                        <  2:1375552/100‑1 (MQ=255)
                           gtgagtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCa                                                                       >  2:1270058/1‑100 (MQ=255)
                             gagtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCaaa                                                                     >  1:605233/1‑100 (MQ=255)
                             gagtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGATTTGGATTTGCaaa                                                                     >  2:1709578/1‑100 (MQ=255)
                              agtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAt                                                                    <  1:1700870/100‑1 (MQ=255)
                               gtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAtt                                                                   >  1:1348962/1‑100 (MQ=255)
                                tgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAttt                                                                  <  2:1046320/100‑1 (MQ=255)
                                tgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAttt                                                                  >  1:4141/1‑100 (MQ=255)
                                 gaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAtttt                                                                 >  1:2625997/1‑100 (MQ=255)
                                 gaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAtttt                                                                 <  1:2382465/100‑1 (MQ=255)
                                   tgtgAAAGTCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGt                                                               <  2:2251698/100‑1 (MQ=255)
                                   tgtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGt                                                               >  2:159611/1‑100 (MQ=255)
                                   tgtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGGCTTAATGTAATGCTTTGGATTTGCAAATTTTg                                                                >  2:1089794/1‑99 (MQ=255)
                                   tctgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGt                                                               <  1:2174460/98‑1 (MQ=255)
                                    gtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTa                                                              <  1:273798/100‑1 (MQ=255)
                                     tgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAg                                                             >  2:707206/1‑100 (MQ=255)
                                      gAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGa                                                            >  2:1202953/1‑100 (MQ=255)
                                       aaaGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAc                                                           >  1:1909755/1‑100 (MQ=255)
                                         aGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCg                                                         <  1:244412/100‑1 (MQ=255)
                                         aGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCg                                                         >  2:1149636/1‑100 (MQ=255)
                                         aGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCg                                                         >  2:66981/1‑100 (MQ=255)
                                          gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCgg                                                        <  1:1987454/100‑1 (MQ=255)
                                          gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCgg                                                        >  1:2158872/1‑100 (MQ=255)
                                          gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCgg                                                        <  1:367884/100‑1 (MQ=255)
                                           ccTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGa                                                       >  2:1161593/1‑100 (MQ=255)
                                            cTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGAt                                                      >  2:1963234/1‑100 (MQ=255)
                                              gACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATaa                                                    >  1:1156966/1‑100 (MQ=255)
                                                cGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAgg                                                  >  2:2070202/1‑100 (MQ=255)
                                                cGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAgg                                                  >  2:2134363/1‑100 (MQ=255)
                                                 gTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGa                                                 >  1:1909650/1‑100 (MQ=255)
                                                  tGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGaa                                                >  1:1071807/1‑100 (MQ=255)
                                                  tGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGaa                                                >  2:427293/1‑100 (MQ=255)
                                                   ggACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAt                                               <  1:142063/100‑1 (MQ=255)
                                                    gACAATAGCTAACGAAAATGGCCTGATGCGAGATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAtt                                              >  2:1522278/1‑100 (MQ=255)
                                                     aCAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTc                                             >  2:1306674/1‑100 (MQ=255)
                                                      cAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCa                                            <  2:2128456/100‑1 (MQ=255)
                                                      cAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCa                                            >  2:694977/1‑100 (MQ=255)
                                                         tAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgc                                         >  1:1293206/1‑100 (MQ=255)
                                                           gCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccg                                       <  1:2735491/100‑1 (MQ=255)
                                                           acattaagacgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccg                                       >  1:1790041‑M2/41‑100 (MQ=255)
                                                            cTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccgc                                      >  2:507399/1‑100 (MQ=255)
                                                             tAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCa                                     >  2:1133102/1‑100 (MQ=255)
                                                              aaCGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCAt                                    >  2:1611019/1‑100 (MQ=255)
                                                                cGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATcc                                  >  2:826437/1‑100 (MQ=255)
                                                                cGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATcc                                  >  1:804189/1‑100 (MQ=255)
                                                                cGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATcc                                  >  1:222268/1‑100 (MQ=255)
                                                                 gAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCg                                 <  1:66981/100‑1 (MQ=255)
                                                                 gAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCg                                 <  1:1355015/100‑1 (MQ=255)
                                                                  gacgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCgg                                >  1:2502196‑M2/34‑100 (MQ=255)
                                                                  aaaaTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAGCGGATAAGGAATTCACGCCGCATCCg                                 >  2:2189607/1‑99 (MQ=255)
                                                                     gtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATCTGCAAATTTTGTAGACCGGATCAGGAATTCACGCCGCATCCGGc                               >  2:414503‑M2/31‑98 (MQ=255)
                                                                      tggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATc                            >  1:2048190‑M2/30‑100 (MQ=255)
                                                                       GGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATca                           >  1:1154833‑M1/1‑100 (MQ=255)
                                                                          CTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaaca                        <  2:818175‑M1/100‑1 (MQ=255)
                                                                          CTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaaca                        >  2:2708245‑M1/1‑100 (MQ=255)
                                                                           TGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaacaa                       <  1:938462‑M1/100‑1 (MQ=255)
                                                                           TGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaacaa                       <  2:777012‑M1/100‑1 (MQ=255)
                                                                             ATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAg                     >  1:2494803‑M1/1‑100 (MQ=255)
                                                                              TGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGc                    <  1:2117314‑M1/100‑1 (MQ=255)
                                                                              TGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGc                    >  2:2674304‑M1/1‑100 (MQ=255)
                                                                              TGCGATATGTTTAACAGGCCACGTCTTAATGTAATGCTGTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACTCCGCATCCGGCATCAACAAAGc                    <  2:1693636‑M1/100‑1 (MQ=255)
                                                                                cGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcgc                  <  1:1347275/100‑1 (MQ=255)
                                                                                 gATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCa                 >  1:2317996/1‑100 (MQ=255)
                                                                                   tatGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAg               <  2:2188887/100‑1 (MQ=255)
                                                                                     tGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgtt             >  2:860590/1‑100 (MQ=255)
                                                                                     tGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgtt             >  2:2092087/1‑100 (MQ=255)
                                                                                     tGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgtt             >  1:1964006/1‑100 (MQ=255)
                                                                                     tGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgt              >  2:1771646/1‑99 (MQ=255)
                                                                                      gTTTATCAGGCCACGTCTTAATGTAATACTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttg            >  2:1672951/1‑100 (MQ=255)
                                                                                         tATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTa         >  2:2265987/1‑100 (MQ=255)
                                                                                         tATCAGGCCACGTATTGAAGTAATGCTTTGGATTTGCAAATTTTGTGGACCGGATAAGGGATTCACGCCGCATCCGGCATCACCAAAGCGCAAgttgt           <  2:2399023/98‑1 (MQ=37)
                                                                                           tcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATc       <  1:1903137‑M2/92‑1 (MQ=255)
                                                                                            caggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATcc      >  2:41549‑M2/8‑100 (MQ=255)
                                                                                            caggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATcc      <  1:973672‑M2/93‑1 (MQ=255)
                                                                                            caggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATcc      <  2:2515629‑M2/93‑1 (MQ=255)
                                                                                              ggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCgg    <  2:531875‑M2/95‑1 (MQ=255)
                                                                                                ccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGtt  <  2:2317981‑M2/97‑1 (MQ=255)
                                                                                                ccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGtt  >  1:1603767‑M2/4‑100 (MQ=255)
                                                                                                   |                                                                                                
GTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTT  >  NC_000913/4344743‑4344938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.