New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4415962 =NA (NA)5 (0.050) 5/166 NT NA noncoding (5/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4415992 = NA (NA)intergenic (+92/+25) aidB/yjfN DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase/DUF1471 family periplasmic protein

Only 100 of 165 total aligned reads displayed.

TGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTACCA  >  NC_000913/4415894‑4416091
                                                                                                  |                                                                                                   
tgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAt                                                                                                    >  2:1455720/1‑100 (MQ=255)
tgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAt                                                                                                    <  1:2524720/100‑1 (MQ=255)
 gtatAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                                                   >  2:850852/4‑100 (MQ=255)
 cagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                                                   >  1:2471634‑M1/68‑100 (MQ=255)
  tgtAATAGTTTACGACTGATGCGACGTTGGTTTCGATTAACTAAATGAAATATGTTAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                  <  2:1612493/100‑1 (MQ=37)
  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                  >  1:119310/1‑100 (MQ=255)
     ctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaagGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                                                >  2:455890‑M1/64‑99 (MQ=255)
      tgataactggggagtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                                              >  1:1996859‑M1/63‑100 (MQ=255)
      aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGTCATTGTTc                                                                                               >  1:1017377/1‑99 (MQ=255)
       gCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt                                                                                             >  2:1322083/1‑100 (MQ=255)
       gCGTATACGACTGATGCGACGCTGGTTTCGATTAACCAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt                                                                                             >  1:1943030/1‑100 (MQ=255)
         gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt                                                                                           >  1:772350/1‑100 (MQ=255)
          tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATTCGGCATTGTTCATTTg                                                                                          >  2:1760514/1‑100 (MQ=255)
          tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTg                                                                                          <  2:1001287/100‑1 (MQ=255)
           ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                                                         >  2:2069283/1‑100 (MQ=255)
            taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                        <  1:603215/100‑1 (MQ=255)
            taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                        <  1:1129311/100‑1 (MQ=255)
            taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                        >  1:2159244/1‑100 (MQ=255)
              cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt                                                                                      <  1:2369185/100‑1 (MQ=255)
               gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                                                     <  2:57630/100‑1 (MQ=255)
               gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                                                     >  1:2406968/1‑100 (MQ=255)
                aCTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAg                                                                                    <  1:1424851/100‑1 (MQ=255)
                 cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                                                   >  2:255811/1‑100 (MQ=255)
                   gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                                                 <  2:517319/100‑1 (MQ=255)
                   gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                                                 <  1:1040792/100‑1 (MQ=255)
                   gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                                                 >  1:1578430/1‑100 (MQ=255)
                     tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                                               <  2:2105705/100‑1 (MQ=255)
                       cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTCGGCCTGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                                                             <  2:2330525/100‑1 (MQ=255)
                          cacTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCGTTTGCTGTAGATGACACTCa                                                                          <  2:1673070/98‑1 (MQ=255)
                              ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                                                       <  2:846949/99‑1 (MQ=255)
                               gTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACCCATGcct                                                                     >  2:417265/1‑98 (MQ=255)
                                    gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                                                >  1:17840/1‑100 (MQ=255)
                                     aTTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTa                                                               <  2:2345530/100‑1 (MQ=255)
                                     aTTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTa                                                               <  1:2450166/100‑1 (MQ=255)
                                       tAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGATCGCGCGGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCCTACAGTATc                                                             >  2:781804/1‑100 (MQ=255)
                                        aaCTAAATGAAATGTGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                                                            >  1:1870793/1‑100 (MQ=255)
                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                                                            <  1:917566/100‑1 (MQ=255)
                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                                                            >  1:2428289/1‑100 (MQ=255)
                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                                                            <  1:2117585/100‑1 (MQ=255)
                                         aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc                                                           >  2:2647176/1‑100 (MQ=255)
                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                          <  1:648445/100‑1 (MQ=255)
                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                          <  1:2500932/100‑1 (MQ=255)
                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                          <  2:2729355/100‑1 (MQ=255)
                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTAATGCATACAGTATCGcc                                                          >  2:1245015/1‑100 (MQ=255)
                                           tAAATGAAATATGTGAAAATTGTATGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATTACACTCATGCATACAGTATCGCCt                                                         <  1:2211920/100‑1 (MQ=255)
                                           tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                                                         >  1:1206507/1‑100 (MQ=255)
                                           tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                                                         >  2:1969663/1‑100 (MQ=255)
                                            aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                                                        <  2:950008/100‑1 (MQ=255)
                                            aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                                                        >  2:2527429/1‑100 (MQ=255)
                                            aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                                                        <  2:422135/100‑1 (MQ=255)
                                            aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                                                        <  2:1843578/100‑1 (MQ=255)
                                             aaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGt                                                       >  1:1586556/1‑100 (MQ=255)
                                              aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                                                      >  1:239543/1‑100 (MQ=255)
                                               tGAAATATGTGAAAATTGTTGGCCGGATTAGGCTCTCGCGCCGCATCCGGCAGTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                                                      <  2:653739/99‑1 (MQ=38)
                                               tGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                                                      <  2:1571508/99‑1 (MQ=255)
                                               tGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAc                                                     <  1:1631302/100‑1 (MQ=255)
                                                 aaaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                                                    >  1:1396590/1‑99 (MQ=255)
                                                        tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt                                            >  2:726185/1‑100 (MQ=255)
                                                         gacaaTTGTAGGCCGGACAAGGCGCTAGCGCCGCATCCGGCATTGTTCGTTTGCTGTAGATGACACTCATGTATACAGTATCGCCGGTACGCGCCAGTTa                                           <  2:2292298/97‑1 (MQ=38)
                                                         gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa                                           >  1:1021944/1‑100 (MQ=255)
                                                         gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa                                           >  1:1142739/1‑100 (MQ=255)
                                                         gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa                                           >  1:429287/1‑100 (MQ=255)
                                                          aatgaacaatgccggatgcggcgcgagcgccttgtccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTAt                                          >  1:406978‑M2/41‑100 (MQ=255)
                                                            tgaacaatgccggatgcggcgcgagcgccttgtccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACTCCCCAGTTATCa                                        >  1:1996859‑M2/39‑100 (MQ=255)
                                                            aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa                                        <  2:472118/100‑1 (MQ=255)
                                                            aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa                                        <  2:1985736/100‑1 (MQ=255)
                                                             aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa                                        <  2:1027095/99‑1 (MQ=255)
                                                               tgtagcncaGACAAGTCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGNATNCAGTNTCGCCTGTACGCGCCAGNTATCAGgc                                     >  1:2252490‑M1/10‑100 (MQ=255)
                                                               tGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCCTTGTTCATTTGCAGTATATGACACTCATGCACTCAGAATCGCCTGTACGCTCCAgcaataagg                                      >  1:1259548/1‑91 (MQ=25)
                                                               tGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgc                                     <  1:1829258/100‑1 (MQ=255)
                                                                gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgct                                    <  1:1723259/100‑1 (MQ=255)
                                                                gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgct                                    <  1:2730409/100‑1 (MQ=255)
                                                                   tgccggatgcggcgcgagcgccttgtccggcATTGTTCTTTTGCTGTAGATGACACTCATGCATACCGTATCGCCTGTACGCGCCAGTTATCAGgc                                     >  2:1699337‑M2/32‑96 (MQ=255)
                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct                                 >  1:2471752/1‑100 (MQ=255)
                                                                    GCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGctgctg                                >  1:1879046‑M1/1‑100 (MQ=255)
                                                                     CCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTgg                               <  1:2129919‑M1/100‑1 (MQ=255)
                                                                      CGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGt                              <  1:1504334‑M1/100‑1 (MQ=255)
                                                                          cAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTc                          >  1:681401/1‑100 (MQ=255)
                                                                               cgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACa                     >  1:23055/1‑100 (MQ=255)
                                                                               cgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACa                     <  2:2684174/100‑1 (MQ=255)
                                                                                gcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACAt                    <  1:513522/100‑1 (MQ=255)
                                                                                 cTCGCGCCGCAGCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGTCAGTTATCAGGCTGCTGGTCTTCGTACATg                   <  2:629640/100‑1 (MQ=255)
                                                                                  tCGCGCCGCATCCGGCATTGTTCCTTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTa                       <  2:2393359/95‑1 (MQ=255)
                                                                                  tCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATgg                  <  1:346674/100‑1 (MQ=255)
                                                                                    gcgcCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGta                <  1:974871/100‑1 (MQ=255)
                                                                                     cgccgcATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGtaa               <  1:592996/100‑1 (MQ=255)
                                                                                       ccgcATCCGGCATTGTTGATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGtaata             <  2:1037282/100‑1 (MQ=255)
                                                                                          cATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATg          <  1:2555838/100‑1 (MQ=255)
                                                                                           aTCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGc         <  2:2171741/100‑1 (MQ=255)
                                                                                            tccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATg          <  2:717755‑M2/92‑1 (MQ=255)
                                                                                            tccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGc         <  2:1756142‑M2/93‑1 (MQ=255)
                                                                                             ccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCgg       <  1:157029‑M2/95‑1 (MQ=255)
                                                                                             ccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCgg       <  2:1110749‑M2/95‑1 (MQ=255)
                                                                                             ccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCgg       >  1:1315252‑M2/6‑100 (MQ=255)
                                                                                             ccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCgg       <  1:1163974‑M2/95‑1 (MQ=255)
                                                                                              cggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGt      >  1:1622692‑M2/5‑100 (MQ=255)
                                                                                               ggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTa     <  2:1489346‑M2/97‑1 (MQ=255)
                                                                                                ggaTTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTAc    <  1:107044/98‑1 (MQ=255)
                                                                                                gcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTAc    <  2:828150‑M2/98‑1 (MQ=255)
                                                                                                  aTTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTACCa  <  1:499929/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
TGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTACCA  >  NC_000913/4415894‑4416091

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.