BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4460417 =	NA (NA)	10 (0.110)	5/168	NT	NA	noncoding (3/84 nt)	REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4460445 =	NA (NA)	10 (0.110)	5/168	NT	NA	noncoding (31/84 nt)	REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 142 total aligned reads displayed.

GTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTCCCCA  >  NC_000913/4460347‑4460544

tctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCATCTTATCAGAc                                                                                                    >  2:2472680‑M1/71‑100 (MQ=255)

gTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAc                                                                                                    >  2:2728839/1‑100 (MQ=255)

 tACTGATGATAATGCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAcc                                                                                                   <  1:781209/100‑1 (MQ=255)

   gagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTg                                                                                                 >  2:1551155‑M1/68‑100 (MQ=255)

   gagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTg                                                                                                 >  1:1871917‑M1/68‑100 (MQ=255)

   cTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAcca                                                                                                  >  1:2292838/1‑98 (MQ=255)

   cTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTg                                                                                                 <  2:2137982/100‑1 (MQ=255)

    tgatgaTAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTgg                                                                                                <  2:1519531/100‑1 (MQ=255)

     gatgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGa                                                                                               <  2:592240/100‑1 (MQ=255)

     gatgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGa                                                                                               >  1:1994524/1‑100 (MQ=255)

      atgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAg                                                                                              <  2:474867/100‑1 (MQ=255)

      atgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAg                                                                                              <  2:231203/100‑1 (MQ=255)

      atgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAg                                                                                              <  2:1146119/100‑1 (MQ=255)

      atgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAg                                                                                              >  1:26705/1‑100 (MQ=255)

             ttCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGc                                                                                       >  2:363156/1‑100 (MQ=255)

               catcatTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGGAACCAATGCCTGATGCGACGCTCGCGCGCCTTATCACACCTGGAGCAATTCCCa                                                                                     >  2:789910/1‑100 (MQ=25)

               cATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCa                                                                                     >  2:1355427/1‑100 (MQ=255)

                 ttattTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCaaa                                                                                   <  2:2247456/100‑1 (MQ=255)

                   attTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCTACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATg                                                                                 <  2:2595216/100‑1 (MQ=255)

                   attTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATg                                                                                 <  1:2017003/100‑1 (MQ=255)

                    tttCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGt                                                                                >  2:1322289/1‑100 (MQ=255)

                    tttCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGt                                                                                <  1:2378655/100‑1 (MQ=255)

                    gttCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGt                                                                                >  2:2746685/2‑100 (MQ=255)

                     ttCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTa                                                                               <  1:1372718/100‑1 (MQ=255)

                     ttCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTAATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTa                                                                               <  2:194957/100‑1 (MQ=255)

                       cGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAgg                                                                             <  1:474220/100‑1 (MQ=255)

                       cGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAgg                                                                             <  1:175555/100‑1 (MQ=255)

                        gCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGc                                                                            <  2:1971801/100‑1 (MQ=255)

                             gCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGAt                                                                       >  2:1578847/1‑100 (MQ=255)

                                tATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAg                                                                    >  2:1453306/1‑100 (MQ=255)

                                  tCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGc                                                                  >  1:1020953/1‑100 (MQ=255)

                                    atctcgcgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGt                                                                <  1:1360242/96‑1 (MQ=255)

                                    aGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGt                                                                >  1:138097/1‑100 (MQ=255)

                                    aGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTAATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCCAATGTACGCCGGATAAGGCg                                                                 >  2:2360845/1‑99 (MQ=255)

                                     gTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGAtgcggcgta                                                               >  2:1013433/1‑92 (MQ=255)

                                     gTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGtt                                                               >  1:1907980/1‑100 (MQ=255)

                                     gTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGtt                                                               >  1:1574367/1‑100 (MQ=255)

                                      tCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGttt                                                              <  1:2147928/100‑1 (MQ=255)

                                      tCCGCGTGTAGGCTGCATCCGGTAACCGATTCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTATGCCGGATAAGGCg                                                                 >  2:1087048/1‑97 (MQ=37)

                                       ccGCGTGTAGGCTGCATCCGGTAATCAATGCCTGTTGCGATGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGACGATTa                                                             >  2:928429/1‑100 (MQ=25)

                                       ccGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTa                                                             >  2:329661/1‑100 (MQ=255)

                                        cgcgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGtagat                                                            >  2:1360237/1‑96 (MQ=255)

                                        cgcgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAc                                                            <  2:203489/100‑1 (MQ=255)

                                        cgcgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAc                                                            >  1:2141476/1‑100 (MQ=255)

                                           gtgtAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgc                                                          <  2:1659530/99‑1 (MQ=255)

                                             gtAGACCGCATCCGGTAATAAATGCCTGATGCGCCGCTGTTGTGTCTTATCAGACCTGGACCAGTTGCGAGAAGTAGGTAGGATCAGACGCTCAcgcctc                                                       >  2:1792115/1‑98 (MQ=12)

                                               aGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCAt                                                     >  2:1621435/1‑100 (MQ=255)

                                                  cTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                                                  >  1:273222/1‑100 (MQ=255)

                                                  cTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                                                  >  1:2456274/1‑100 (MQ=255)

                                                    gCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCGGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                <  2:316577/100‑1 (MQ=21)

                                                    gCATCCGCTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGACGTAAACGCCTTATCCGGc                                                <  2:687777/100‑1 (MQ=21)

                                                     cATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGcc                                               <  1:1013437/100‑2 (MQ=21)

                                                     cATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                               >  1:1615562/1‑100 (MQ=255)

                                                      aTCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAt                                              >  1:1917709/1‑100 (MQ=255)

                                                      aTCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAt                                              >  1:1917595/1‑100 (MQ=255)

                                                       tCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGccta                                             <  1:2438954/100‑4 (MQ=21)

                                                       tCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAtt                                             >  2:1239079/1‑100 (MQ=255)

                                                           gTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCt                                         <  1:1489876/100‑1 (MQ=255)

                                                            tAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCtt                                        >  1:2695327/1‑100 (MQ=255)

                                                             aaTCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTa                                       >  1:20803/1‑100 (MQ=255)

                                                              aTCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAg                                      <  1:2530687/100‑1 (MQ=255)

                                                               tCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGc                                     <  1:1355432/100‑1 (MQ=255)

                                                                cAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCt                                    >  1:2539131/1‑100 (MQ=255)

                                                                cAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCt                                    >  2:749942/1‑100 (MQ=255)

                                                                 caggtctgataagacgcgacagcgtcgcatcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTc                                   >  1:1871917‑M2/34‑100 (MQ=255)

                                                                 aaTGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTc                                   <  1:2389501/100‑1 (MQ=255)

                                                                  aTGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCa                                  <  2:1054301/100‑1 (MQ=255)

                                                                   tGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCag                                 <  2:1917586/100‑1 (MQ=255)

                                                                   tGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCag                                 <  2:1917700/100‑1 (MQ=255)

                                                                   tGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCag                                 <  1:1722970/100‑1 (MQ=255)

                                                                    gtctgataagatgcgacagcgtcgcatcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCaga                                >  2:2472680‑M2/31‑100 (MQ=255)

                                                                    gtctgataagacgcgacagcgtcgcatcagACCTGGAGCAATTGCAAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCaga                                >  1:2142802‑M2/31‑100 (MQ=255)

                                                                     ccTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCagag                               <  2:2219181/100‑1 (MQ=255)

                                                                      ctgataagacgcgacagcgtcgcatcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGt                              >  1:401680‑M2/29‑100 (MQ=255)

                                                                      ctgataagacgcgacagcgtcgcatcagACCTCGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCACaga                                >  2:1135694‑M2/29‑98 (MQ=255)

                                                                      CTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGt                              <  1:2058078‑M1/100‑1 (MQ=255)

                                                                       tgataagacgcgacagcgtcgcatcagACCTGGAGCAATTGCAAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGt                              >  2:1536784‑M2/28‑99 (MQ=255)

                                                                        gataagacgcgacagcgtcgcatcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGa                            >  1:315520‑M2/27‑100 (MQ=255)

                                                                         ATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGaa                           >  2:2605773‑M1/1‑100 (MQ=255)

                                                                          TGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAg                          <  2:774933‑M1/100‑1 (MQ=255)

                                                                          TGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAg                          >  2:2274593‑M1/1‑100 (MQ=255)

                                                                            cGACGCTGTCGCGTCTTATCAGACCTGGAGAAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGAt                        >  2:726138/1‑100 (MQ=255)

                                                                              aCGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTa                      >  1:2682797/1‑100 (MQ=255)

                                                                               cGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTaa                     >  1:1192143/1‑100 (MQ=255)

                                                                                gCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAAc                    >  1:304541/1‑100 (MQ=255)

                                                                                 cTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAAcc                   >  1:728932/1‑100 (MQ=255)

                                                                                 cTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAAcc                   <  2:894057/100‑1 (MQ=255)

                                                                                 cTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAAcc                   <  2:1924803/100‑1 (MQ=255)

                                                                                   gTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTa                 >  2:1822700/1‑100 (MQ=255)

                                                                                   gTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTa                 >  1:1374882/1‑100 (MQ=255)

                                                                                         tCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGcc           <  1:1322294/100‑1 (MQ=255)

                                                                                          cTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGccc          >  1:9663/1‑100 (MQ=255)

                                                                                           ttATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCa         >  1:2626105/1‑100 (MQ=255)

                                                                                           ttATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCa         >  1:2043344/1‑100 (MQ=255)

                                                                                             atcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCAtt       >  2:2663071‑M2/6‑100 (MQ=255)

                                                                                               cagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTcc     <  1:1244047‑M2/97‑1 (MQ=255)

                                                                                               cagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTcc     >  1:2051786‑M2/4‑100 (MQ=255)

                                                                                                agACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTccc    >  2:625166‑M2/3‑100 (MQ=255)

                                                                                                 gACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTcccc   <  1:383272‑M2/99‑1 (MQ=255)

                                                                                                  aCCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGAGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTCCCCa  >  2:461978/1‑100 (MQ=255)

GTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTCCCCA  >  NC_000913/4460347‑4460544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.