New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225998NA (NA)24 (0.250) 18/170 NT NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon

Only 100 of 105 total aligned reads displayed.

AGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATG  >  NC_000913/225925‑226114
                                                                                          |                                                                                                   
aGGTTAATGCGGCGAACCGGGGGAACTTAAACATCTAAGTACCCCGATGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGgaggag                                                                                            <  2:393939/100‑1 (MQ=255)
 ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                                           >  1:2362442/1‑100 (MQ=33)
 ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTACCGGCGAGCGAACGGGGAGGAGc                                                                                           <  2:1597743/100‑1 (MQ=17)
  gTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                                          >  1:2437028/1‑100 (MQ=33)
   ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                                         <  1:686779/100‑1 (MQ=32)
   ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                                         >  1:1740398/1‑100 (MQ=33)
     aaTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCag                                                                                       <  1:744701/100‑1 (MQ=33)
     aaTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTACCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                                         >  2:2559529/1‑98 (MQ=17)
       tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCagag                                                                                     <  2:618064/100‑1 (MQ=33)
       tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCagag                                                                                     <  1:2738557/100‑1 (MQ=33)
        gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAACTCAACCGAGCTTCCCCCAGTAGCGGCGACCGAACGGGGAGGAACCCAGAGc                                                                                    >  1:2570771/1‑100 (MQ=11)
        gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                                    >  2:1313217/1‑100 (MQ=33)
        gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                                    <  1:134496/100‑1 (MQ=33)
         aGGCGAACCGGGGGAACGGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                                   <  1:1557361/100‑1 (MQ=17)
          ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAACGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                                   >  2:2596692/1‑99 (MQ=17)
          ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                                  >  1:680067/1‑100 (MQ=33)
           gCGTACCGGGGGACTTGAAACATCTCGGTACCGCGAGGTAAATCAGCCGACCGAGATTCTCGCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                                    <  2:1334133/97‑1 (MQ=2)
           gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                                 <  1:2174813/100‑1 (MQ=33)
            cGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGa                                                                                <  1:1870379/100‑1 (MQ=33)
             gAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGaa                                                                               <  1:2488247/100‑1 (MQ=33)
               aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                                             <  1:309046/100‑1 (MQ=33)
               aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                                             <  1:2122531/100‑1 (MQ=33)
                ccGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCa                                                                            >  2:612407/1‑100 (MQ=32)
                 cGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                                             <  1:2146717/98‑1 (MQ=32)
                  gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                                          >  2:1479737/1‑100 (MQ=33)
                   ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                                         <  2:2505504/100‑1 (MQ=33)
                   ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                                         <  1:2358264/100‑1 (MQ=33)
                   ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                                         >  1:647218/1‑100 (MQ=32)
                   ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                                         <  1:1714838/100‑1 (MQ=32)
                     ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                                       <  2:1155930/100‑1 (MQ=33)
                     ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                                       <  1:1413715/100‑1 (MQ=33)
                      gAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgt                                                                      >  1:1951653/1‑100 (MQ=33)
                       aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                     <  1:2266022/100‑1 (MQ=33)
                       aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                     <  2:1982716/100‑1 (MQ=33)
                        aCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgt                                                                    >  1:2380832/1‑100 (MQ=32)
                         cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                                   <  1:1442479/100‑1 (MQ=33)
                          tGAAACATCTAAGTACCCCGAGGAAAGGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                                  >  2:1419197/1‑100 (MQ=17)
                          tGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                                  <  2:2114165/100‑1 (MQ=33)
                          tGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                                  >  1:1301124/1‑100 (MQ=33)
                           gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGGGAGCGAACGGGGAGGAGCGCGGAGCCTGAATCAgtgtgtgtgt                                                                  >  2:1641285/1‑99 (MQ=255)
                           gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                                   >  2:2647937/1‑98 (MQ=32)
                           gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                                 >  2:2647846/1‑100 (MQ=32)
                           gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                                 <  1:1574842/100‑1 (MQ=32)
                              aCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGt                                                              <  1:580152/100‑1 (MQ=33)
                               cATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTg                                                             >  1:97229/1‑100 (MQ=33)
                                 tCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGa                                                           <  1:1554316/100‑1 (MQ=33)
                                   tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                                         <  1:238690/100‑1 (MQ=32)
                                   tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                                         <  1:2071878/100‑1 (MQ=33)
                                   tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                                         <  2:1667156/100‑1 (MQ=32)
                                    aaGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGc                                                        >  1:923018/1‑100 (MQ=32)
                                      gTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCAGACTCAGTGTGTGTGTTAGTGGACGCGt                                                      >  2:205922/1‑100 (MQ=255)
                                         ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                                   <  1:1980646/100‑1 (MQ=33)
                                         ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                                   >  1:899685/1‑100 (MQ=33)
                                          cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGTGAGGAGCCCAGACCCTGAAGCAGGGTGTGGGTTGGTGGAAGCGCCTgg                                                  >  2:441802/1‑100 (MQ=11)
                                          cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                                  <  1:145907/100‑1 (MQ=33)
                                           ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGa                                                 >  2:1250296/1‑100 (MQ=32)
                                           ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGGGTGTGTGTTAGTGGAAGCGTCTgg                                                  >  2:1216348/1‑99 (MQ=17)
                                               ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                                             <  1:1479743/100‑1 (MQ=33)
                                               ggAAAAGAAATCAACCGAGATTCCACCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATTAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                                             <  2:2727650/100‑1 (MQ=12)
                                                  aaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgc                                          >  1:2396327/1‑100 (MQ=32)
                                                   aaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcg                                         >  2:2714546/1‑100 (MQ=33)
                                                    aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGAGGAGGAGCCCAGCGCCTGAAGCCGGGTGTGTGTGAGTGGAAGAGTGTGGAGAGgagcgc                                        >  2:2527183/1‑100 (MQ=11)
                                                    aGAAATCAACCGAGATTCCCCCAGTAGCGGAGAGCGAACGAGGAGGAGCCCACAGCGTGAAGCCGTGGGTGGGGTAGGGGAAGGGTCTGGaaa                                               >  2:2301998/1‑93 (MQ=11)
                                                     gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGcgcgcg                                       <  1:2046182/100‑1 (MQ=33)
                                                     gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGcgcgcg                                       <  2:1382412/100‑1 (MQ=33)
                                                        aTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATa                                    <  2:1407082/100‑1 (MQ=33)
                                                         tCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATAc                                   >  1:2084660/1‑100 (MQ=33)
                                                          cAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACa                                  >  1:1073226/1‑100 (MQ=33)
                                                          cAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACa                                  >  2:1554674/1‑100 (MQ=33)
                                                           aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg                                 <  1:1663193/100‑1 (MQ=33)
                                                            aCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAgg                                >  1:1092158/1‑100 (MQ=33)
                                                            aCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGCGCGGACCCCAGAGCCTGCAGCGGTGTGTGTGGGAGTGGAAGCGGCTGGAAAGGCGCGCGATACa                                  >  2:1399005/1‑98 (MQ=11)
                                                             ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAgg                                <  1:1474660/99‑1 (MQ=32)
                                                              cGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGt                              >  1:589569/1‑100 (MQ=33)
                                                                 gaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc                           <  1:700397/100‑1 (MQ=33)
                                                                  aTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACa                          <  1:43253/100‑1 (MQ=32)
                                                                  aTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCACGAGCCTGAATAAGTGTGTGTGTAAGTGGACGCCTCTGAAAAGGCGCGCGATAAAGGGTGAc                           >  2:1355599/1‑99 (MQ=11)
                                                                       cccAGTAGCGGCGAGCGAACAGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGcccc                     >  2:1683273/1‑100 (MQ=18)
                                                                        ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg                    <  1:783691/100‑1 (MQ=33)
                                                                          aGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGcccc                     >  2:2223462/1‑97 (MQ=32)
                                                                           ggaGCGGCGAGCGAACGTGGGGGAGCTCAGAGCCGGATTAAGTGATTGAGTTCGTGGCAGCGGCGGGAGAGGCGCGCGATACAGGGTGACCGCCCCGt                   >  2:1284734/3‑98 (MQ=2)
                                                                           gTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTac                 >  2:2646811/1‑100 (MQ=32)
                                                                              gcggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTAcaca              <  1:1491687/100‑1 (MQ=32)
                                                                              gcggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTAcaca              <  1:2610655/100‑1 (MQ=33)
                                                                                ggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACaaa            >  1:1969561/1‑100 (MQ=33)
                                                                                  cgagcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACaaaaa          >  1:1273820/1‑100 (MQ=32)
                                                                                  cgagcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACaaaaa          >  1:896963/1‑100 (MQ=33)
                                                                                    agcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATg        <  1:495432/100‑1 (MQ=32)
                                                                                    agcgaACGGGGAGGAGCCCAGAGCCTGAAGCAGTGTGTGTGTTTGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATg        <  2:273768/100‑1 (MQ=12)
                                                                                      cgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca      >  1:2652403/1‑100 (MQ=33)
                                                                                      cgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca      <  1:2205802/100‑1 (MQ=33)
                                                                                      cgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca      >  2:2205787/1‑100 (MQ=33)
                                                                                      cgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca      >  2:39564/1‑100 (MQ=32)
                                                                                      cgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca      >  1:1428290/1‑100 (MQ=33)
                                                                                      cgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca      <  2:102654/100‑1 (MQ=32)
                                                                                       gaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGcac     <  2:2744247/100‑1 (MQ=32)
                                                                                       gaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGcac     <  1:1287230/100‑1 (MQ=33)
                                                                                        aaCGGGGGGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGcaca    >  2:46164/1‑100 (MQ=18)
                                                                                          cGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATg  <  1:239336/100‑1 (MQ=33)
                                                                                          cGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATg  <  1:684578/100‑1 (MQ=33)
                                                                                          |                                                                                                   
AGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATG  >  NC_000913/225925‑226114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.