| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 357518 | NA (NA) | 4 (0.040) | 4/162 | NT | NA | noncoding (35/79 nt) | REP27 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP27 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 357732 | NA (NA) | noncoding (49/79 nt) | REP28 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP28 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 101 total aligned reads displayed.
CATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTA > NC_000913/357636‑357827 | cATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTcgt > 1:2462240‑M2/1‑97 (MQ=255) tgtgCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACTCCTTATCCTGCCTACGTAGAGCACTGAACTc < 2:237651‑M2/96‑2 (MQ=255) gtgCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATTCCGGATGCGGCGTGGTCGCCTTATCCTGCCTACGTAGAGCACTGACCTcggagg < 2:2378299‑M2/100‑7 (MQ=255) gtgCAAAAATGCATTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTcgtagg < 1:1805241‑M2/100‑7 (MQ=255) tgCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTcgtaggc > 1:2682560‑M2/1‑93 (MQ=255) tgCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTcgtaggc > 1:442832‑M2/1‑93 (MQ=255) tgCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTcgtaggc < 1:1591026‑M2/100‑8 (MQ=255) cAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCt > 1:34337/1‑100 (MQ=255) cAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCt > 1:369616/1‑100 (MQ=255) aaaaTGCCTTCGCAGCGGCTGTCTGCCAGCTATAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTATGCCTGa > 2:448239/1‑100 (MQ=255) aaTGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATa < 1:2630077/100‑1 (MQ=255) aaTGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCATAGGCCTGATa < 2:299699/100‑1 (MQ=255) tGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAg < 1:631978/100‑1 (MQ=255) gCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGc > 2:1304385/1‑100 (MQ=255) gCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGc < 1:720020/100‑1 (MQ=255) ccTTCGCGGCGGCTGTCTGCCAGCTGTAGTTTATGCCGTATGCGGCGTGTACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCg < 1:1451230/100‑1 (MQ=255) cTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGt > 1:566586/1‑100 (MQ=255) ttCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTa > 1:1500164/1‑100 (MQ=255) ttCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTa < 1:601234/100‑1 (MQ=255) tCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTa < 1:2607165/99‑1 (MQ=255) gCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAgcg > 2:2214921/1‑100 (MQ=255) gCAGCGGCTGTCTGCCAGCTGTAGTTAATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAgcg > 1:1670968/1‑100 (MQ=255) gCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCAt < 1:531408/100‑1 (MQ=255) cggtagTCTACCCGCTGTCGTTTTTGCCGGATACGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAgc < 2:1117838/90‑1 (MQ=11) gCTTTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAg < 1:1568716/100‑1 (MQ=255) gCTGTCTGGCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAg < 1:23189/100‑1 (MQ=255) gCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAg < 1:2580697/100‑1 (MQ=255) gCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAg < 1:1971018/100‑1 (MQ=255) gCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAg > 2:2073523/1‑100 (MQ=255) tttCTGGCAGCCGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGc < 1:2564856/98‑1 (MQ=255) tttCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGc < 1:2480139/98‑1 (MQ=255) tGTCTGCCAGCTTTAGTTTATGCCGGACGCCGCGTTAACCCCTTAACCGGCCTACTTACAGCACTGACCTCGTAGGGCTGATAAGCGTAGCGCATCAGGc < 2:1951522/100‑1 (MQ=14) gTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa < 1:234291/100‑1 (MQ=255) cTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt > 1:874401/1‑100 (MQ=40) cTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt < 1:217185/100‑1 (MQ=40) cTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGGGCATCAGGCaa > 2:1002799/1‑99 (MQ=255) tGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt > 2:1553815/1‑100 (MQ=40) tGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt > 2:1872177/1‑100 (MQ=40) cAGCTTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCa < 2:1551794/90‑1 (MQ=17) gCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAg < 1:1205874/99‑1 (MQ=33) gCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGc < 2:1644060/100‑1 (MQ=33) cTGTAGTTTATGCAGGATGCGGCGTGAACGCTTTATCCGGCCTACGTGGTGCACTGATCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGcc < 2:454059/100‑1 (MQ=11) gTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGc < 1:1910415/100‑1 (MQ=11) aGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAg > 2:1003054/1‑100 (MQ=31) gTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGa < 1:1991392/100‑1 (MQ=32) acgtaggccggataaggcgttcacgccgcATCCGGCATACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGccgctga < 1:143078‑M1/71‑4 (MQ=255) ttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGAcc > 1:972919/1‑100 (MQ=35) ttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGAcc > 1:42421/1‑100 (MQ=35) tATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCt > 1:273998/1‑100 (MQ=35) gatctggataaggcgttcacgccgcATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCtg > 2:35217‑M1/26‑100 (MQ=255) gatctggataaggcgttcacgccgcATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCtg > 2:913914‑M1/26‑100 (MQ=255) aggccggataaggcgttcacgccgcATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCtg < 1:2026225‑M1/75‑1 (MQ=255) aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCtg < 2:1863246/100‑1 (MQ=38) tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCtg < 1:2542177/99‑1 (MQ=38) gCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCtgtg < 1:1016085/100‑1 (MQ=38) gCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCtgtg > 1:1548317/1‑100 (MQ=38) ccggataaggcgttcacgccgcATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGatctgggt < 1:265372‑M1/78‑4 (MQ=255) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTgtgt > 1:2342252/1‑100 (MQ=35) cggataaggcgttcacgccgcATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAAGCAATTCCAGCCGCTGAtctgtggc < 2:2682542‑M1/79‑3 (MQ=255) ggataaggcgttcacgccgcATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCagacctgagatc < 1:35217‑M1/80‑6 (MQ=255) ggataaggcgttcacgccgcATCCGGCCTACGTAGAGAACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCagacctgagatc < 1:913918‑M1/80‑6 (MQ=255) aTGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGc < 2:791520/100‑1 (MQ=38) aTGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGc < 2:34337/100‑1 (MQ=38) cggcgTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGc < 2:1367611/100‑1 (MQ=38) cggcgTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGc > 1:799011/1‑100 (MQ=35) cggcgTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGc > 1:502821/1‑100 (MQ=38) cggcgTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGc < 1:2153466/100‑1 (MQ=38) cggcgTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGc < 1:2181844/100‑1 (MQ=38) ggcgtgcacgccgcATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCgg > 2:265372‑M1/15‑98 (MQ=255) ggcgTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCt > 1:1229862/1‑100 (MQ=38) gAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGt < 1:502162/100‑1 (MQ=38) aaCGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTg < 1:2434409/100‑1 (MQ=38) aCGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATACGCGTAGCGCATCAGGCAATTCCAGCCGCAAACATGTGTCAGCGGCTACCGt > 2:1757325/1‑98 (MQ=255) aCGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTCTCAGCGGCTACCGTGa > 2:1607182/1‑100 (MQ=38) cGCCTTATCCGGCCTACGTAGAGCACTGAACTcgtaggcctgataaggcgttcacgccgcatccggcataaactaagctcgctgtaacccagtcgttcaa < 2:1371251‑M2/100‑69 (MQ=255) cGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGAt < 1:2421747/100‑1 (MQ=35) gCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGAtt < 1:1632136/100‑1 (MQ=38) ccatATCTGGCCGACGTAGCGCACTGGCCTCGTACGCCGGCTATGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGAtt < 2:1772446/96‑1 (MQ=11) ccTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTc < 1:2194344/100‑1 (MQ=38) tATCCGGCCTACGTAGAGCACTGAACTcgtaggccggataaggcgttcacgccgcatccggcctaaactaagctcgctgtaacccagtcgttcaacgttt < 1:1912381‑M2/100‑74 (MQ=255) tCCGGCCTACGTAGAGCACTGAACTcgtaggccggataaggcgttcacgccgcatccggcataaactaagctcgctgtaacccagtcgttcaacgtttgt < 1:1382353‑M2/100‑76 (MQ=255) CGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCg > 1:2305430‑M1/1‑100 (MQ=255) ggCCTACGTAGAGCACTGAACTcgtaggccggataaggcgttcacgccgcatccggcataaactaagctcgctgtaacccagtcgttcaacgtttgtaat < 1:594051‑M2/100‑79 (MQ=255) GGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGc < 2:1785572‑M1/100‑1 (MQ=255) GCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGcc > 2:567606‑M1/1‑100 (MQ=255) GCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGcc < 1:220281‑M1/100‑1 (MQ=255) CCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCa < 2:292559‑M1/100‑1 (MQ=255) cTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCcaa < 2:1400897/100‑1 (MQ=255) aCGTAGAGCACTGAACTCGGAGGCCTGAAAAGCGTCGCGCAGAAGGCAATTCCAGCCGCAGACCCGTGTCCGCGGCTACCGTGAATCATTTCCGCcaaaa > 2:876768/1‑98 (MQ=14) cGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCcaacaa > 2:1946493/1‑100 (MQ=255) agCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACcgcg < 1:1304390/100‑1 (MQ=40) cACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCa < 2:379942/100‑1 (MQ=40) cACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCa < 2:2070946/100‑1 (MQ=255) aCTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAt < 1:598690/100‑1 (MQ=255) aCTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAt < 1:1553822/100‑1 (MQ=255) aCTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAt < 2:799007/100‑1 (MQ=255) cTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAtt < 2:1154020/100‑1 (MQ=40) cTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAtt > 1:528221/1‑100 (MQ=255) cTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAtt < 1:844876/100‑1 (MQ=40) gAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTa > 1:372191/1‑100 (MQ=255) | CATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTA > NC_000913/357636‑357827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |