New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 361887 =NA (NA)9 (0.100) 5/164 NT NA noncoding (5/34 nt) REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 361917 = NA (NA)intergenic (‑57/+9) lacA/lacY thiogalactoside acetyltransferase/lactose permease

Only 100 of 148 total aligned reads displayed.

ATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCG  >  NC_000913/361818‑362014
                                                                                                   |                                                                                                 
acgcttagcggccccggcccgctttccctgctgcgtcgtcagatgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACa                                                                                                   >  2:1929473‑M1/70‑100 (MQ=255)
aTAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCAGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACa                                                                                                   >  1:1282902/1‑100 (MQ=255)
 tAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACat                                                                                                  >  1:1314936/1‑100 (MQ=255)
 cgcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatgtcggataaggcgctcgcgccgcatccgacat                                                                                                  <  2:1299346‑M2/2‑1 (MQ=255)
 cgcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACat                                                                                                  >  1:970243‑M1/69‑100 (MQ=255)
  gcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatgtcggataaggcgctcgcgccgcatccgacatt                                                                                                 <  2:1252722‑M2/3‑1 (MQ=255)
  gcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACatt                                                                                                 >  1:730591‑M1/68‑100 (MQ=255)
  gcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACatt                                                                                                 >  1:673719‑M1/68‑100 (MQ=255)
  gcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACatt                                                                                                 >  1:2531545‑M1/68‑100 (MQ=255)
    cTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattga                                                                                               >  1:576902/1‑100 (MQ=255)
       gCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                                                            <  1:1126149/100‑1 (MQ=255)
        ccTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGc                                                                                           >  1:1639114/1‑100 (MQ=255)
        ccTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCAGCCGACATTGATTGc                                                                                           <  1:1173789/100‑1 (MQ=255)
         cTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCt                                                                                          <  1:1249758/100‑1 (MQ=255)
         cTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCt                                                                                          <  1:1421247/100‑1 (MQ=255)
          tGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCtt                                                                                         <  2:255256/100‑1 (MQ=255)
           gCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTa                                                                                        <  1:2058260/100‑1 (MQ=255)
           gCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTa                                                                                        >  1:2205028/1‑100 (MQ=255)
             tctTATTCTTTCGGTCATTGGCATGTTCAATGCGATAACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTaa                                                                                       >  2:93045/1‑99 (MQ=255)
              ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                     >  2:2665486/1‑100 (MQ=255)
              ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                     >  2:24395/1‑100 (MQ=255)
              ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                     <  2:2061731/100‑1 (MQ=255)
              ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                     <  1:829810/100‑1 (MQ=255)
               ttATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCg                                                                                    <  1:1790890/100‑1 (MQ=255)
                   tCTTTCTGTCATTGTCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACtt                                                                                <  2:932782/100‑1 (MQ=255)
                    cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                                               >  2:1786091/1‑100 (MQ=255)
                     tttCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttca                                                                              <  2:348705/100‑1 (MQ=255)
                      ttCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcat                                                                             <  1:461709/100‑1 (MQ=255)
                         ggTCATTGGCATGTTCAATGCGATTACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattca                                                                          <  1:1360860/100‑1 (MQ=255)
                           tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                        <  1:990812/100‑1 (MQ=255)
                           tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                        <  1:2129346/100‑1 (MQ=255)
                           tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                        >  1:2349605/1‑100 (MQ=255)
                             aTTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTg                                                                      <  1:338900/100‑1 (MQ=255)
                             aTTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTACATTCACCTg                                                                      >  2:1799834/1‑100 (MQ=255)
                              ttGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTga                                                                     >  1:2003802/1‑100 (MQ=255)
                                    tGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgc                                                               <  2:1849769/100‑1 (MQ=255)
                                     gTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgca                                                              <  1:2052001/100‑1 (MQ=255)
                                       tCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagc                                                            <  2:2587629/100‑1 (MQ=255)
                                       tCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagc                                                            <  2:2310429/100‑1 (MQ=255)
                                          aTGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAgg                                                         >  1:1907194/1‑100 (MQ=255)
                                             cGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTACGCGACTTCATTCACCTGACGACGCAGCAGGGaa                                                      >  2:1572657/1‑100 (MQ=255)
                                              gATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGaaa                                                     <  1:645145/100‑1 (MQ=255)
                                                tCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGc                                                   <  1:2106723/100‑1 (MQ=255)
                                                   cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggg                                                >  1:1877002/1‑100 (MQ=255)
                                                       gTTATGATATGTTGGTCGGATAAAGCGCTCGCGCCGCATCCGCCATTTATTGCTTAAGAGACTTCATTCAACTGACGACGAAGCAGGGAAAGCgggccg                                             >  2:871233/1‑99 (MQ=38)
                                                        ttATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggg                                           <  1:2258007/100‑1 (MQ=255)
                                                           tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGGCTTCATGCACCTGACGACGCAGCAGGGAAAGggggccggggcc                                        <  1:1923952/100‑1 (MQ=255)
                                                           tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc                                        <  1:95453/100‑1 (MQ=255)
                                                           tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc                                        <  1:377464/100‑1 (MQ=255)
                                                             caatcaatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGc                                      >  1:2056758‑M2/39‑100 (MQ=255)
                                                             caatcaatGTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggccg                                       <  1:670542‑M1/91‑1 (MQ=255)
                                                             atatGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCAGc                                      >  2:890136/1‑100 (MQ=255)
                                                                 gTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAg                                  >  1:2686071/1‑100 (MQ=255)
                                                                  ttGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                 <  2:1071072/100‑1 (MQ=255)
                                                                  ttGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttcc                                 <  1:2397477/100‑5 (MQ=38)
                                                                  ttGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttcc                                 <  1:622192/100‑5 (MQ=38)
                                                                  aatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                 >  1:730591‑M2/34‑100 (MQ=255)
                                                                  aatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                 >  1:673719‑M2/34‑100 (MQ=255)
                                                                  aatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                 >  1:2531545‑M2/34‑100 (MQ=255)
                                                                  aatGTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                 <  2:1252722‑M1/97‑1 (MQ=255)
                                                                   tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                <  1:2244884/100‑1 (MQ=255)
                                                                   tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                <  1:913225/100‑1 (MQ=255)
                                                                   tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                <  1:1413770/100‑1 (MQ=255)
                                                                   tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                >  1:2493300/1‑100 (MQ=255)
                                                                   tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttccc                                <  2:156256/100‑6 (MQ=37)
                                                                   atGTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                 <  2:2626660‑M1/97‑1 (MQ=255)
                                                                   atGTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                <  2:1299346‑M1/98‑1 (MQ=255)
                                                                    tgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCATCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGt                               >  2:1929473‑M2/32‑100 (MQ=255)
                                                                    tgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGt                               >  1:2387633‑M2/32‑100 (MQ=255)
                                                                    ggTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGt                               >  1:1666821/1‑100 (MQ=255)
                                                                    ggTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttccct                               <  2:369981/100‑7 (MQ=37)
                                                                     gTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttccctg                              <  1:549741/100‑8 (MQ=37)
                                                                     GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                              >  2:1044394‑M1/1‑100 (MQ=255)
                                                                     GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                              >  1:680942‑M1/1‑100 (MQ=255)
                                                                       CGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGaa                            >  2:1869‑M1/1‑100 (MQ=255)
                                                                        GGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAac                           <  1:1609707‑M1/100‑1 (MQ=255)
                                                                        GGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAac                           <  2:2560284‑M1/100‑1 (MQ=255)
                                                                        GGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAac                           <  1:880521‑M1/100‑1 (MQ=255)
                                                                         GATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAaca                          >  1:999937‑M1/1‑100 (MQ=255)
                                                                          ATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAacac                         <  1:2659375‑M1/100‑1 (MQ=255)
                                                                            aaGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCGGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACgg                       <  2:2144860/100‑1 (MQ=255)
                                                                            aaGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACg                        <  2:772213/99‑1 (MQ=255)
                                                                             aGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGa                      <  1:587794/100‑1 (MQ=255)
                                                                              ggCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCCTTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTAAACACGGaa                     >  2:2429607/1‑100 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAt                   <  1:2650532/100‑1 (MQ=255)
                                                                                   tCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTaa                >  2:43997/1‑100 (MQ=255)
                                                                                   tCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTaa                <  2:652/100‑1 (MQ=255)
                                                                                    cgcgCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAg               <  1:2050209/100‑1 (MQ=255)
                                                                                    cgcgCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAg               >  1:1229491/1‑100 (MQ=255)
                                                                                      cgccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGt             <  1:2485167/100‑1 (MQ=255)
                                                                                        ccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGa           >  1:2702398/1‑100 (MQ=255)
                                                                                         cgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAATAAGGTGaa          >  2:2589176/1‑100 (MQ=255)
                                                                                          gcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTTACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAg         <  1:913473/100‑1 (MQ=255)
                                                                                             tccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGccc      <  2:2626229‑M2/94‑1 (MQ=255)
                                                                                              ccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCa     >  1:1199245‑M2/6‑100 (MQ=255)
                                                                                               cgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAg    >  1:2320178‑M2/5‑100 (MQ=255)
                                                                                                gacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgc   <  2:576901‑M2/97‑1 (MQ=255)
                                                                                                gacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgc   >  1:410412‑M2/4‑100 (MQ=255)
                                                                                                gacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgc   <  2:700496‑M2/97‑1 (MQ=255)
                                                                                                  cATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgcg  <  1:1220756‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                 
ATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCG  >  NC_000913/361818‑362014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.