New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2539674NA (NA)12 (0.130) 9/164 NT NA intergenic (‑91/+43) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit
?NC_000913 = 2539688 NA (NA)intergenic (‑105/+29) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit

Only 100 of 146 total aligned reads displayed.

TATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGCCGC  >  NC_000913/2539590‑2539786
                                                                                                  |                                                                                                  
tATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCt                                                                                                   <  2:693103‑M2/100‑2 (MQ=255)
    cATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgg                                                                                               <  2:1628428‑M2/100‑6 (MQ=255)
     aTACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccggg                                                                                              <  1:1330176‑M2/100‑7 (MQ=255)
       aCGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCg                                                                                            >  1:1718146/1‑100 (MQ=255)
        cGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGt                                                                                           >  2:2686833/1‑100 (MQ=255)
         gtggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                                                                          <  2:1996894/100‑1 (MQ=255)
         gtggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                                                                          >  1:1148066/1‑100 (MQ=255)
          tggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGATTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGttt                                                                                         <  2:2193655/100‑1 (MQ=255)
          tggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCACGTCTACAGGTGACCAACCCTGCCATTAAAAAGCCCGGATCGCGTGAAGCGCCTCCGGGCGtn                                                                                          <  2:103279/99‑2 (MQ=37)
           ggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTa                                                                                        >  2:205403/1‑100 (MQ=255)
             tgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                                      >  1:2577349/1‑100 (MQ=255)
              gtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACa                                                                                     <  2:326495/100‑1 (MQ=255)
                 gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                                  >  1:834434/1‑100 (MQ=255)
                 gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                                  >  1:2299622/1‑100 (MQ=255)
                 gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                                  >  1:891173/1‑100 (MQ=255)
                 gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                                  >  2:1121040/1‑100 (MQ=255)
                  ccTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCa                                                                                 <  1:1339923/100‑1 (MQ=255)
                   cTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCAc                                                                                >  2:2200046/1‑100 (MQ=255)
                   cTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCAc                                                                                <  2:2141042/100‑1 (MQ=255)
                   cTGATGCGACGCTTGCGCGTCTTATCACGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCa                                                                                 <  2:1585659/99‑1 (MQ=255)
                    tGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                                                                               <  2:1851912/100‑1 (MQ=255)
                        gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAc                                                                           >  1:622367/1‑100 (MQ=255)
                         cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTGTAACATTCACTCAAcc                                                                          >  2:1542545/1‑100 (MQ=255)
                            cGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTAt                                                                       <  1:1595196/100‑1 (MQ=255)
                             gCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATc                                                                      <  1:1835312/100‑1 (MQ=255)
                              cgcaagcgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCa                                                                     >  2:696985/6‑100 (MQ=255)
                                tGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAgn                                                                   <  1:2219223/100‑2 (MQ=255)
                                 gcgcGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGgc                                                                  >  2:1361503/1‑100 (MQ=255)
                                      tCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCttt                                                             >  2:967089/1‑100 (MQ=255)
                                       cTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtg                                                            <  1:1140612/100‑1 (MQ=255)
                                        ttATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgt                                                           <  1:2395448/100‑1 (MQ=255)
                                         tATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgtg                                                          >  1:850005/1‑100 (MQ=255)
                                          aTCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGc                                                         <  1:2398763/100‑1 (MQ=255)
                                          aTCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGc                                                         >  2:540202/1‑100 (MQ=255)
                                           tCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCg                                                        <  1:2499597/100‑1 (MQ=255)
                                             aGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAACGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCCGGCGCTTTGTGc                                                         >  2:750613/1‑97 (MQ=255)
                                              ggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgaga                                                     <  2:1937175/100‑1 (MQ=255)
                                               gTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                                    <  1:1120108/100‑1 (MQ=255)
                                               gTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                                    <  2:1665671/100‑1 (MQ=255)
                                                tCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGc                                                   >  2:297453/1‑100 (MQ=255)
                                                 cTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCa                                                  >  2:2204321/1‑100 (MQ=255)
                                                  tACAGGTTACAAACCTTGCCATTACCACGCCCGGCTCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTACACCTCTCAGGCGATCTGTGCTCGAGc                                                   >  2:2160011/1‑98 (MQ=255)
                                                  tACAGGTTACAAACCTTGCCATTACACCGCCCGGCTCGCGGGAACCGCCTCCGGGCGTTTAACATTCAACCAAGCTATCAGGCGACTTGCGCGagag                                                    >  2:2160282/1‑97 (MQ=255)
                                                   aCAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAg                                                >  1:106089/1‑100 (MQ=255)
                                                   aCAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAg                                                >  1:106407/1‑100 (MQ=255)
                                                   aCAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACATATCAGGCGCTTTGTGCGAGAGCAAg                                                >  2:100091/1‑100 (MQ=255)
                                                    cAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGt                                               <  1:355218/100‑1 (MQ=255)
                                                     aGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGtt                                              <  1:59528/100‑1 (MQ=255)
                                                     aGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGtt                                              <  1:2641363/100‑1 (MQ=255)
                                                      ggTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTc                                             >  1:2330473/1‑100 (MQ=255)
                                                      ggTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTc                                             >  1:2546634/1‑100 (MQ=255)
                                                         tACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTc                                          <  1:2200061/100‑1 (MQ=255)
                                                          aCAAACCTTGTCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCa                                         >  1:2697305/1‑100 (MQ=255)
                                                          aCAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCa                                         <  1:160827/100‑1 (MQ=255)
                                                           cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                                        >  2:2307028/1‑100 (MQ=255)
                                                           cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                                        >  1:1750963/1‑100 (MQ=255)
                                                            acaCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGTGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATc                                       <  2:2319687/98‑1 (MQ=255)
                                                            aaaCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATc                                       >  1:1014124/1‑100 (MQ=255)
                                                               ccTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCCGGCGATTTGTGCGAGAGCAAGTTCCTCATtgcg                                    >  1:2681178/1‑100 (MQ=255)
                                                                 ttGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATTGCggg                                  <  1:793945/100‑1 (MQ=255)
                                                                 ttGCCATTAAAAAGCCAGGATCGCGGGAAGCGCCTACGGGCGTTTAACATTCACTCAACCAATCAGGCGCGTTGTGCGAGAGCAAGTTCCTCATCGAggg                                  >  1:2330382/1‑100 (MQ=255)
                                                                   gCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGtt                                >  1:710985/1‑100 (MQ=255)
                                                                    ccATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGttt                               >  2:2164435/1‑100 (MQ=255)
                                                                     cATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaa                              <  1:2624050‑M2/100‑71 (MQ=255)
                                                                     cATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcagccaa                              <  2:1504952‑M2/100‑71 (MQ=255)
                                                                     cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                              >  2:96056/1‑100 (MQ=255)
                                                                     cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                              <  2:1828217/100‑1 (MQ=255)
                                                                     cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                              <  1:900772/100‑1 (MQ=255)
                                                                      aTTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaac                             <  1:201213‑M2/100‑72 (MQ=255)
                                                                      aTTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCg                             >  2:2362710/1‑100 (MQ=255)
                                                                      aTTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCg                             >  2:2519539/1‑100 (MQ=255)
                                                                        tAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGAt                           >  2:2420282/1‑100 (MQ=255)
                                                                        tAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGAt                           <  2:1688239/100‑1 (MQ=255)
                                                                         aaaaaGCCCGGATCGCGGGAAGCGCCtcctggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacacc                          <  1:230917‑M2/100‑75 (MQ=255)
                                                                         aaaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATa                          <  1:1929362/100‑1 (MQ=255)
                                                                         aaaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATa                          >  2:48997/1‑100 (MQ=255)
                                                                          aaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATAc                         >  1:1545360/1‑100 (MQ=255)
                                                                            aaGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacg                       <  1:2036502‑M2/100‑78 (MQ=255)
                                                                            aaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGc                       >  1:2161619/1‑100 (MQ=255)
                                                                             aGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCt                      <  1:1824704/100‑1 (MQ=255)
                                                                              gCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgta                     <  1:160932‑M2/100‑80 (MQ=255)
                                                                               cccGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtat                    <  1:1150428‑M2/100‑81 (MQ=255)
                                                                                 cGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcgtc                  >  2:2465626/1‑100 (MQ=255)
                                                                                  ggATCGTGGGAAGCGCCTCCGGGCGTTTAATATTCACTCGACTTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcgtcg                 <  2:164331/100‑1 (MQ=255)
                                                                                   gATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGc                >  1:369583/1‑100 (MQ=255)
                                                                                    aTCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGcc               <  2:108667/100‑1 (MQ=255)
                                                                                     tCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCg              <  1:784183/100‑1 (MQ=255)
                                                                                      cgcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGt             >  1:152301/1‑100 (MQ=255)
                                                                                      cgcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGt             <  2:272924/100‑1 (MQ=255)
                                                                                      cgcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGt             >  2:1299823/1‑100 (MQ=255)
                                                                                      cgcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGt             <  1:1790119/100‑1 (MQ=255)
                                                                                       gcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGtt            <  2:1413323/100‑1 (MQ=255)
                                                                                        cgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTta           <  2:1775886/100‑1 (MQ=255)
                                                                                        cgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTACCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTta           <  2:1998361/100‑1 (MQ=255)
                                                                                         gggAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTtat          <  2:2577331/100‑1 (MQ=255)
                                                                                          ggAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTtata         <  1:2598895/100‑1 (MQ=255)
                                                                                             aGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAg      >  2:49001/1‑100 (MQ=255)
                                                                                              gcgcCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGc     >  1:1773187/1‑100 (MQ=255)
                                                                                               cgcCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAACGAGGGTTACGATCCGCTCGTCGCCGTTATACCGcc    >  1:1882522/1‑100 (MQ=255)
                                                                                                gcCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGCcg   <  1:2632627/100‑1 (MQ=255)
                                                                                                  |                                                                                                  
TATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGCCGC  >  NC_000913/2539590‑2539786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.