| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,352,826 | G→A | 70.2% | P67L (CCG→CTG) | arcB ← | aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,352,826 | 0 | G | A | 70.2% | 150.6 / 87.4 | 119 | P67L (CCG→CTG) | arcB | aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB |
| Reads supporting (aligned to +/- strand): ref base G (14/21); new base A (36/46); total (51/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
CTCGCGCATCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGTACCACAATGG > NC_000913/3352729‑3352922 | ctcgcgcATCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGc < 1:575762/100‑1 (MQ=255) tcgcgcATCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCg < 1:2601084/100‑1 (MQ=255) tcgcgcATCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCg < 2:1544567/100‑1 (MQ=255) gcgcATCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTa > 1:2661855/1‑100 (MQ=255) cgcATCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTaa > 1:1125649/1‑100 (MQ=255) cATCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATc < 2:2733087/100‑1 (MQ=255) cATCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATc < 1:137830/100‑1 (MQ=255) aTCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCa > 1:835679/1‑100 (MQ=255) aTCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCa < 2:2457712/100‑1 (MQ=255) tcctccAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCa > 1:1575284/1‑100 (MQ=255) cctccAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCaa < 2:1227705/100‑1 (MQ=255) ctccAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCaaa > 2:928851/1‑100 (MQ=255) ctccAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCaaa > 2:51368/1‑100 (MQ=255) ctccAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCACCCACAGCGTAATCAGCaaa < 2:467715/100‑1 (MQ=255) tccAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAAc < 1:2373022/100‑1 (MQ=255) tccAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAAc < 1:2748821/100‑1 (MQ=255) ccAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAAcc < 2:1088719/100‑1 (MQ=255) cAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAAcc < 2:1982585/99‑1 (MQ=255) cAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGGAGACCGCCCACAGCGTAATCAGCAAACCa > 2:1516309/1‑100 (MQ=255) aGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCaa > 1:847573/1‑100 (MQ=255) gTTTTTGCACCAGCCGTGACAGACGTTGTCGTGGCTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCaaa < 2:2603716/100‑1 (MQ=255) tttttGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAaag < 1:211075/100‑1 (MQ=255) ttttGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAaaga < 2:2652676/100‑1 (MQ=255) ttGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTACTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAaagaag < 2:1945465/100‑1 (MQ=255) cACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGAt > 1:2692615/1‑99 (MQ=255) cACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATa < 1:839975/100‑1 (MQ=255) aCCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAg < 2:1248023/100‑1 (MQ=255) aCCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAg > 1:2268061/1‑100 (MQ=255) ccAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGa > 1:762342/1‑100 (MQ=255) ccAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGa > 1:2449924/1‑100 (MQ=255) gCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTATTTCTTCTATTTTGTAATCAGCAAACCAAAGAAGATAGAACg < 1:1987903/100‑1 (MQ=255) gCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACg < 2:535886/100‑1 (MQ=255) ccGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAACCAGCAAACCAAAGAAGATAGAACGa > 2:557870/1‑100 (MQ=255) cGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGaa < 2:2126027/100‑1 (MQ=255) gTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAAt < 2:1772789/100‑1 (MQ=255) gTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAAt < 1:1196206/100‑1 (MQ=255) gTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAAt < 1:1191933/100‑1 (MQ=255) gACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATaa > 1:116251/1‑100 (MQ=255) aCAGACGTTGTCGTGAGTCCTCCAGTGGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAAc < 2:574852/100‑1 (MQ=255) cAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACa < 1:1150016/100‑1 (MQ=255) cAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACa > 1:664001/1‑100 (MQ=255) gACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATc > 1:1700534/1‑100 (MQ=255) gACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATc > 1:2085275/1‑100 (MQ=255) aCGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCTCCTACGGCGTAATCAGCAAAACAAAGAAGATAGAACGAATAACATCa > 2:2300235/1‑100 (MQ=255) cGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCaa < 2:1775649/100‑1 (MQ=255) cGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCaa < 2:830932/100‑1 (MQ=255) cGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCaa < 1:2023194/100‑1 (MQ=255) ttGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATg < 1:2603666/100‑1 (MQ=255) tGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGc < 2:2461976/100‑1 (MQ=255) gTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCt > 1:1520330/1‑100 (MQ=255) cGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCttt > 1:2169344/1‑100 (MQ=255) cGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCt > 2:1021640/1‑98 (MQ=255) tgtctcctgCAGTTGCTCGACGACCACCGATAGAAAGTATACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCg < 2:514965/97‑1 (MQ=255) tGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCg < 1:1329641/100‑1 (MQ=255) tGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCg < 1:531235/100‑1 (MQ=255) gACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGa < 1:1038294/100‑1 (MQ=255) ctcctcCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGAcc < 1:815168/100‑1 (MQ=255) ctcctcCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGAcc < 1:1046624/100‑1 (MQ=255) ctcctcCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGAcc < 1:696713/100‑1 (MQ=255) ctcctcCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGAcc < 1:1716572/100‑1 (MQ=255) ctcctcCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGAcc < 1:1116989/100‑1 (MQ=255) ctcctcCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGAcc < 2:1206408/100‑1 (MQ=255) tcctccAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGAcc < 2:1422889/99‑1 (MQ=255) tcctccAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCt < 1:1738478/100‑1 (MQ=255) cctccAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTg < 2:1752102/100‑1 (MQ=255) tccAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCCATGCTTTCGaacaaa > 2:2290345/1‑94 (MQ=255) tccAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGAc > 1:187463/1‑100 (MQ=255) tccAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACCGCGTAATAAGCAAACCAAAGCAGATACACCGAACAACATCAATGCTTTCGACCTGa > 2:1257393/1‑99 (MQ=255) tccAGTTGCTCGACGACCACCGATAGAAAGTAGACAGCCCACAGCGTAAACAGCAAACAAAAGAAGAAAGAAAGAACAAAATCCATCCTTTCGAc > 2:1365496/1‑95 (MQ=255) tccAGTTGCTCGACGACCACCGATAGAAAGTAGACAGCACACAGCAGAATCAGCAAAACAAAGAAGATAGCACGAATAACATTAATGCTTTTGACCTGa > 2:1257466/1‑99 (MQ=255) ccAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGAcc < 1:1791656/100‑1 (MQ=255) ccAGTTGCTCGACGACCACCGATAGAAAGTAGACAGCCCACAGCGAAATCAGCAAACCAAAGAAGATCGACCGAATCACATCAATGCTCTCGACCTGa > 2:1144032/1‑98 (MQ=255) cAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGAcc < 1:459088/99‑1 (MQ=255) aGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCAt < 2:232948/100‑1 (MQ=255) ttGCTCGACGACCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATgc < 2:1337270/100‑1 (MQ=255) cttccgatctcaccGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATgcag < 1:1915459/90‑1 (MQ=255) acgacCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCCAAGAAGATAGAACGAATCACATCAATGCTTTCGACCTGACCATGCAGCACCa < 2:1641251/100‑1 (MQ=255) cgacCACCGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCa > 1:1887310/1‑99 (MQ=255) accaccGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATgg > 2:1267034/1‑100 (MQ=255) accaccGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATgg < 1:1463297/100‑1 (MQ=255) ccaccGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGt > 2:2703387/1‑100 (MQ=255) caccGATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGtt > 2:1865371/1‑100 (MQ=255) gATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCg < 2:1376753/100‑1 (MQ=255) gATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCg > 1:1383923/1‑100 (MQ=255) gATAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCg < 2:1383917/100‑1 (MQ=255) tAGAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGcc > 2:91438/1‑100 (MQ=255) gAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCAt > 2:1887497/1‑100 (MQ=255) gAAAGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCAt > 1:2690474/1‑100 (MQ=255) aacgTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCAt > 2:1480555/4‑99 (MQ=255) aaaGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTGCCGCCAt > 2:2323797/1‑99 (MQ=255) aaaGTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCAtt < 2:1039912/100‑1 (MQ=255) gTAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGt < 2:2085262/100‑1 (MQ=255) tAGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGTa < 1:2476819/100‑1 (MQ=255) aGACCGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGTa < 2:2302235/99‑1 (MQ=255) gACCGCCCACGGCGTAATCAGCAAACCAAAGAAGCTAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGCAcc > 2:1540489/1‑100 (MQ=255) ccGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGTACcac > 1:1067795/1‑100 (MQ=255) ccGCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGTACcac > 1:47648/1‑100 (MQ=255) gCCCACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGTAAcaca > 2:2251073/1‑99 (MQ=255) cccACAGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGTACCACAAt < 1:2562773/100‑1 (MQ=255) cacaGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGTACCACAATgg > 1:1830753/1‑100 (MQ=255) | CTCGCGCATCTCCTCCAGTTTTTGCACCAGCCGTGACAGACGTTGTCGTGACTCCTCCAGTTGCTCGACGACCACCGATAGAAAGTAGACCGCCCACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGCAGCACCATGGTTACCGCCATTTGTACCACAATGG > NC_000913/3352729‑3352922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |