| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,479,020 | A→T | 17.3% | intergenic (+131/+14) | rraB → / ← yjgM | protein inhibitor of RNase E/GNAT family putative N‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,479,020 | 0 | A | T | 17.3% | 252.4 / 42.6 | 103 | intergenic (+131/+14) | rraB/yjgM | protein inhibitor of RNase E/GNAT family putative N‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (48/37); new base T (7/11); total (55/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.42e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
CTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCT > NC_000913/4478921‑4479119 | cggCAACCTGGTGAATTTGTAGCCCGGATAAAGCATTCATGTGACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAaca > 1:1859768/3‑100 (MQ=255)cTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAaca < 1:718902/100‑1 (MQ=255) tGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGAATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGGTGAacac > 1:841948/1‑100 (MQ=255) aaCCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcg < 2:2645795/100‑1 (MQ=255) aaCCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcg < 2:1968143/100‑1 (MQ=255) aCCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCgg > 2:2035228/1‑100 (MQ=255) ccTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCggg < 1:1543606/100‑1 (MQ=39) ccTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATACCCGCGAGTTCAACAcacg > 1:988975/1‑98 (MQ=255) cTGGTGAATTTGTAGCCCGTATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTCTTAATGTTCGAATGCCCGCGTGTTCAACTCGCggg < 2:1670630/99‑1 (MQ=38) cTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGc < 1:1434682/100‑1 (MQ=39) cTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGc < 1:261301/100‑1 (MQ=39) cTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGc < 1:992098/100‑1 (MQ=39) cTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGc > 1:715053/1‑100 (MQ=255) ggTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGCAt < 2:299367/100‑1 (MQ=38) ggTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAt > 2:154675/1‑100 (MQ=255) ggTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAt > 2:513350/1‑100 (MQ=255) ggTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAt > 1:780655/1‑100 (MQ=255) ggTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAt > 1:1897854/1‑100 (MQ=255) tGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAttt < 2:137350/100‑1 (MQ=255) tGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAttt > 2:2675508/1‑100 (MQ=255) tGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAttt > 1:2745619/1‑100 (MQ=255) tGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TGGTTAATGTTCGAATGCCCGCGAGTTGAACACGCggg < 2:1731136/95‑1 (MQ=255) gAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttt < 1:617131/100‑1 (MQ=255) gAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttt > 1:1900993/1‑100 (MQ=255) aaTTTGTATCCCTGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATTTTCGAATGCCCGCGAGTTTAACACGCGGGCAtttt < 1:117314/99‑1 (MQ=39) aTTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttttt > 1:178836/1‑100 (MQ=255) aTTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGGACG‑‑TTGTTAATGTTCAAATGCCCGCGTGTTCAACTCGCGGGCAttcgaa < 2:1174720/100‑5 (MQ=37) tttGTAGCCCGAATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGCAttcgaac < 1:924824/100‑6 (MQ=37) ttGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGCAttcgaaca < 1:1207869/100‑7 (MQ=37) ttGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTa > 1:1021766/1‑100 (MQ=255) tGTAGCCCGGATAAGGCATTCATGTCACATCCGGCACAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTag < 2:584757/100‑1 (MQ=255) gTAGCCCGGATAAGTCATTGATGTCACATCGGGCATAAACAAAATGTGCG‑‑TTGTTAATTTTGGAATGCCCGCGAGTTGAACACTCGGGCAtttgttt < 2:2734926/97‑1 (MQ=255) gTAACCCGAATAGGGCAGTCCCGTCACATCCAGCATAGACAAAACGTACG‑‑TTGTTAATTTTCGAGTGCCCGCGTGTTCTCCTCGCGGGAAtt < 2:1647846/92‑1 (MQ=255) tAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTagag < 1:1565850/100‑1 (MQ=255) tAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTagag < 2:1055657/100‑1 (MQ=255) aGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGt > 1:1522798/1‑100 (MQ=255) acccGGATAAGGACTTCATCTTCCATCCGACATAAACAAAACGTACG‑‑TTGGTGATGGGCGAATGCCCGGGAGGTGAACACTCGGGCGGGTTTTTAgtgtg > 2:1882348/2‑99 (MQ=255) ggATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGGGTTcgcg > 1:872731/1‑100 (MQ=255) aGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACa > 1:1914206/1‑100 (MQ=255) aGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACa > 2:2062385/1‑100 (MQ=255) aGGCATTCATGTCACATCCGACATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACa < 2:2112743/100‑1 (MQ=255) ggCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACAt > 1:34263/1‑100 (MQ=255) ggCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACAt > 2:1569331/1‑100 (MQ=255) gCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATc > 1:574003/1‑100 (MQ=255) gCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATc > 1:2548379/1‑100 (MQ=255) tCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTTATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCa < 2:1231591/100‑1 (MQ=255) cATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCAc < 2:1302346/100‑1 (MQ=255) cATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCAc > 1:1689641/1‑100 (MQ=255) gTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTc < 2:1287718/100‑1 (MQ=255) gTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTc < 1:1996176/100‑1 (MQ=255) acaTCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTcaca > 1:1477901/1‑100 (MQ=255) caTCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACaa > 1:1344258/1‑100 (MQ=255) tCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATc < 1:732874/100‑1 (MQ=255) ccGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCg < 1:976845/100‑1 (MQ=255) ggCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGAc > 1:448117/1‑100 (MQ=255) cATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACAt > 1:701046/1‑100 (MQ=255) aacattaacaaCGTACGTTTTGTTTATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGAc > 2:1264098/10‑100 (MQ=37) aaCAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGcc < 2:2367180/100‑1 (MQ=255) aCAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGccc > 1:1339603/1‑100 (MQ=255) aCAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGccc > 1:1973567/1‑100 (MQ=255) aCAAAACGTACG‑‑TTGTAAATGTTCGAATGCCCGCGAGATGAACACGCGGGCATTTTTTTAGAGTTCGCGCAAAATCCGCACTTCACAATCGACATGGccc > 2:319679/1‑100 (MQ=255) cAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCg > 2:1868222/1‑100 (MQ=255) ttgttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAgc < 1:2143417/100‑1 (MQ=255) tgttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAgcg < 1:370048/100‑1 (MQ=255) aaTGTTCGACTGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGCTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATa > 2:1244193/1‑100 (MQ=255) aaTGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATa < 1:1502098/100‑1 (MQ=255) ctaaaaaaaTGCCCGCGTGTTCAACTCGAGCGCATCTTTTTAGAGTTCGCGCACCAAACGCACTGCACACTCGACATGGCCCGTGACGCCCACCGCAtca > 2:2003610/8‑98 (MQ=12) gTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTc > 1:935910/1‑100 (MQ=255) gTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTc > 1:742179/1‑100 (MQ=255) aaaaaaaTGCCCGCGTGTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTc > 1:1783826/6‑100 (MQ=37) ttCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACCTGGCCCGTGCAGCAAAGAGCATAGTCg > 2:2135658/1‑100 (MQ=255) tCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGa > 1:1924758/1‑100 (MQ=255) gAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCTCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGata < 2:1522791/100‑1 (MQ=255) gAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGata < 1:1358872/100‑1 (MQ=255) gAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGata < 2:238271/100‑1 (MQ=255) aaaTGCCCGCGTGTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGata > 1:1250698/2‑100 (MQ=38) aTGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGatat < 2:324406/99‑1 (MQ=255) gCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCt < 2:348017/100‑1 (MQ=255) gCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCt < 2:854756/100‑1 (MQ=255) cccGCGTGTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTc > 1:2628064/1‑100 (MQ=255) cccGCGTGTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTc > 2:2729745/1‑100 (MQ=255) cccGCGTGTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTc > 2:1111020/1‑100 (MQ=255) cccGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTc > 1:1110025/1‑100 (MQ=255) cccGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTc > 2:2619651/1‑100 (MQ=255) ccGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCa > 1:759023/1‑100 (MQ=255) cgcgAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCaa > 2:1411433/1‑100 (MQ=255) cgcgAGTTGAACACGCGGGCATTTTTTTAGAGCTCGCGCAACCTCCGCACTTCACAATCGACAGGGCCCGTGCAGCCAACCGCCTACTCGATACGCTCaa > 2:1208883/1‑100 (MQ=255) cgAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAg < 2:1021762/100‑1 (MQ=255) cgAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAg < 1:2062398/100‑1 (MQ=255) gAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGACCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGc < 2:2570002/100‑1 (MQ=255) tgTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGcc > 1:1158235/2‑100 (MQ=255) tGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCaa > 2:2193362/1‑100 (MQ=255) tGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCa < 1:200886/99‑1 (MQ=255) gAACACGCGGGCATTTTTTTAGAGATGGCGCAACATCCGCCCTTCACAATCGACATGGCTCGTGCAGCCAAGCGCATAGTCGATATGTTCaaa > 2:1684088/1‑93 (MQ=255) aaCACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAAt > 1:615648/1‑100 (MQ=255) cacGCTGGCATTTTTTTAGACTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGc < 2:2095790/100‑1 (MQ=255) cacGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGc < 1:2381592/100‑1 (MQ=255) cacGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGc > 2:590026/1‑100 (MQ=255) cacGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGc > 2:878848/1‑100 (MQ=255) acGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCt > 2:1323230/1‑100 (MQ=255) | CTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACG‑‑TTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCT > NC_000913/4478921‑4479119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |