New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 697486	78 (1.110)	7 (0.120)	7/172	8.3	9.2%	intergenic (‑353/+27)	metT/asnB	tRNA‑Met/asparagine synthetase B
	?	NC_000913	= 697492	71 (1.170)					intergenic (‑359/+21)	metT/asnB	tRNA‑Met/asparagine synthetase B
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

GAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTC  >  NC_000913/697397‑697590                                                                                                |                                                                                                   gaGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCgg                                                                                                <  2:1409958/100‑1 (MQ=255)  aGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCggg                                                                                               <  2:1253299/100‑1 (MQ=255)    ttGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGc                                                                                             <  1:269186/100‑1 (MQ=255)        cAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGtt                                                                                         >  2:136833/1‑100 (MQ=255)         aaaCAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGttt                                                                                        <  1:961190/100‑1 (MQ=255)         aaaCAGTGATGTGGCAAACCCAGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGttt                                                                                        >  2:764059/1‑100 (MQ=255)          aaCAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTc                                                                                       >  2:1779/1‑100 (MQ=255)           aCAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACCAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCg                                                                                      <  1:270360/100‑1 (MQ=255)            cAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGc                                                                                     >  2:1399464/1‑100 (MQ=255)                gATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTATTTCGCAttt                                                                                 >  1:44067/1‑100 (MQ=255)                   gtgGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTctt                                                                              >  2:1109714/1‑100 (MQ=255)                    tgGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTctta                                                                             <  2:1552414/100‑1 (MQ=255)                    tgGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTctta                                                                             >  2:707546/1‑100 (MQ=255)                      gCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTcttact                                                                           <  2:843538/100‑1 (MQ=255)                      gCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTcttac                                                                            <  1:1536255/99‑1 (MQ=255)                      gCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTcttac                                                                            <  1:310956/99‑1 (MQ=255)                       cAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTcttactt                                                                          >  1:1452917/1‑100 (MQ=255)                        aaaCCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTcttactta                                                                         <  1:1507345/100‑1 (MQ=255)                         aaCCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGATTCGCATTTCTTACTtat                                                                        >  1:723824/1‑100 (MQ=255)                           cccGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATAc                                                                      <  2:1395419/100‑1 (MQ=255)                            ccGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAATCAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACg                                                                     <  1:946486/100‑1 (MQ=255)                            ccGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTtata                                                                       <  1:136831/98‑1 (MQ=255)                             cGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGc                                                                    >  1:1330089/1‑100 (MQ=255)                              ggAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGcc                                                                   <  2:1391643/100‑1 (MQ=255)                               gAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGcc                                                                   >  1:1409246/1‑99 (MQ=255)                               gAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCg                                                                  <  1:726682/100‑1 (MQ=255)                                aaCATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGcc                                                                   >  1:975241/1‑98 (MQ=255)                                      tCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTg                                                           <  2:1171756/100‑1 (MQ=255)                                      tCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTg                                                           <  2:96760/100‑1 (MQ=255)                                          tACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAaca                                                       <  2:795061/100‑1 (MQ=255)                                           aCTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAacac                                                      >  2:74833/1‑100 (MQ=255)                                            cTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACAcc                                                     <  2:548223/100‑1 (MQ=255)                                                 tatCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACcg                                                <  1:1256998/100‑1 (MQ=255)                                                  atCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACcgc                                               >  2:676772/1‑100 (MQ=255)                                                  atCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACcga                                               >  2:1257004/1‑99 (MQ=255)                                                   tCAGAATCAACACGCACCTCAATAACTGAAACAGCCCCGTATTTCACCGGGGCTGTGTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACcgcg                                              <  1:1174434/100‑1 (MQ=255)                                                   tCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACcgcg                                              >  1:525636/1‑100 (MQ=255)                                                   tCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACcgcg                                              >  1:1450546/1‑100 (MQ=255)                                                   tCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACcgcg                                              >  1:1221660/1‑100 (MQ=255)                                                   tCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACcgcg                                              >  2:1292749/1‑100 (MQ=255)                                                    cAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACcgcgc                                             <  1:707544/100‑1 (MQ=255)                                                     aGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACcgcgcg                                            <  1:1218093/100‑1 (MQ=255)                                                      gAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGa                                           >  2:620529/1‑100 (MQ=255)                                                      gAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGa                                           >  1:1073172/1‑100 (MQ=255)                                                        aTCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGAcc                                         >  2:15657/1‑100 (MQ=255)                                                           aacaaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGa                                      >  1:603456/1‑100 (MQ=255)                                                            acaaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGAc                                     <  1:1669462/100‑1 (MQ=255)                                                            acaaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGAc                                     >  2:503863/1‑100 (MQ=255)                                                             caaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACg                                    >  1:520083/1‑100 (MQ=255)                                                              aaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACgg                                   <  1:283725/100‑1 (MQ=255)                                                                  aCCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCg                               <  2:1050950/100‑1 (MQ=255)                                                                   ccTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGt                              <  1:337101/100‑1 (MQ=255)                                                                   ccTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGt                              >  2:496929/1‑100 (MQ=255)                                                                    cTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTc                             >  2:760913/1‑100 (MQ=255)                                                                    cTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTc                             >  1:798640/1‑100 (MQ=255)                                                                    cTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTc                             <  2:1251132/100‑1 (MQ=255)                                                                     tCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTcc                            >  2:418321/1‑100 (MQ=255)                                                                      cAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCa                           >  2:66789/1‑100 (MQ=255)                                                                      cAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCa                           >  1:1300799/1‑100 (MQ=255)                                                                      cAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCa                           >  2:101803/1‑100 (MQ=255)                                                                      cAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCa                           >  2:487997/1‑100 (MQ=255)                                                                      cAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCa                           <  2:429891/100‑1 (MQ=255)                                                                      cAATAACTGAAACAGCCCCGAATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCa                           >  2:1681338/1‑100 (MQ=255)                                                                         tAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCTCGACCAGACGGATCGTCCAttt                        <  1:988027/100‑1 (MQ=255)                                                                            cTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCt                     >  1:657573/1‑100 (MQ=255)                                                                            cTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCCTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCt                     >  2:1258437/1‑100 (MQ=255)                                                                             tGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCtt                    <  1:840353/100‑1 (MQ=255)                                                                             tGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGGCCATTTTCtt                    >  1:1110256/1‑100 (MQ=255)                                                                              gAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTg                   <  2:1452924/100‑1 (MQ=255)                                                                              gAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTg                   <  1:1779/100‑1 (MQ=255)                                                                                 aCAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAAc                >  1:46121/1‑100 (MQ=255)                                                                                 aCAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTCACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAAc                >  1:913328/1‑100 (MQ=255)                                                                                    gCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCt             >  2:1123376/1‑100 (MQ=255)                                                                                      cccGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTc           >  1:1050120/1‑100 (MQ=255)                                                                                          gATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATcc       <  2:1409253/100‑1 (MQ=255)                                                                                               cACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTc  >  2:674822/1‑100 (MQ=255)                                                                                               cACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTc  >  2:445534/1‑100 (MQ=255)                                                                                               cACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGAGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCAttn  <  1:674820/100‑2 (MQ=255)                                                                                                |                                                                                                   GAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACTGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTC  >  NC_000913/697397‑697590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.