| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,248,104 | Δ1 bp | 15.2% | coding (332/663 nt) | yqjA → | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,248,104 | 0 | A | . | 15.2% | 435.0 / 77.9 | 151 | coding (332/663 nt) | yqjA | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Reads supporting (aligned to +/- strand): ref base A (65/61); new base . (9/14); total (75/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 159 total aligned reads displayed.
CCGCCAGCCTCGGCTGCTGGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGATTGCCGG > NC_000913/3248005‑3248203 | ccgccAGCCTCGGCTGCTGGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTatca < 1:64098/100‑1 (MQ=255) cTCGGCTGCTGGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAAcgcg > 2:1103427/1‑100 (MQ=255) gctgctGGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGcaca > 1:3050311/1‑100 (MQ=255) ctgctgGGTCAGCTATATTCAGGGGCGATGGCTGGGCACTACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCacac > 1:743947/1‑100 (MQ=255) nggTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCCTc > 1:144282/2‑99 (MQ=255) gggTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATC‑TCAACGCGCACACCATCtt > 2:1011338/1‑100 (MQ=255) tCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCtttt < 1:728698/100‑1 (MQ=255) cAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCttttt < 1:3461282/100‑1 (MQ=255) cAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCttttt > 2:3584138/1‑100 (MQ=255) cAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCttttt < 1:1683431/100‑1 (MQ=255) aggtataGTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTc < 1:1100543/97‑1 (MQ=255) aGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTc < 2:229850/100‑1 (MQ=255) aGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATC‑TCAACGCGCACACCATCTTTTTCa < 1:3155429/100‑1 (MQ=255) ggtataTTCAAGGGCGATCGCTAGCCAAGACCCGCACCGTACTACTCTGGCTATGTAATTTACCCGCGCATTATC‑TCTACGCGCACACCATCtgttgga < 1:2138127/97‑4 (MQ=255) gCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACACAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCa < 2:634881/100‑1 (MQ=255) gCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCa < 1:1725603/100‑1 (MQ=255) gCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCa < 2:1131729/100‑1 (MQ=255) gCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCa > 1:1236078/1‑100 (MQ=255) gCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCa < 1:2419849/100‑1 (MQ=255) gCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCa > 1:2300271/1‑100 (MQ=255) gCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCa < 2:3555289/100‑1 (MQ=255) gCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCa < 2:901632/100‑1 (MQ=255) gCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATC‑TCAACGCGCACACCATCTTTTTCAt > 1:537980/1‑100 (MQ=255) cTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCAt > 1:41281/1‑100 (MQ=255) cTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCAt < 1:1293761/100‑1 (MQ=255) cTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCAt > 2:2758051/1‑100 (MQ=255) tataTTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATa > 1:1864806/1‑100 (MQ=255) ttCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGNACANCATCTTTTTCATAAaca > 1:1968340/1‑100 (MQ=255) tCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAacac > 2:3201992/1‑100 (MQ=255) tCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATC‑TCAACGCGCACACCATCTTTTTCAt > 1:2934664/1‑93 (MQ=255) cAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACg > 1:1043595/1‑100 (MQ=255) cAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACg > 2:2266360/1‑100 (MQ=255) aGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACgg < 1:132020/100‑1 (MQ=255) aGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACgg < 2:2821259/100‑1 (MQ=255) aGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCCCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACgg > 2:1934018/1‑100 (MQ=255) ggggCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGt > 1:915623/1‑100 (MQ=255) gggCGCTGGTGGGGCATTACCCGCACCGTAGAAATCTGGCTATCTCATTTACCCGCGAATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGt < 1:1829218/99‑1 (MQ=255) gggCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAaccgtgtt < 2:2686004/100‑7 (MQ=255) gggCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGtt > 2:3139266/1‑100 (MQ=255) cGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATC‑TCAACGCGCACACCATCTTTTTCATAAACACGGTTTATc < 2:2867417/100‑1 (MQ=255) gATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATc < 1:3151505/100‑1 (MQ=255) gATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATc < 1:1171001/100‑1 (MQ=255) aTGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACATCATCTTTTTCATAAACACGGTTTATCg < 1:3560271/100‑1 (MQ=255) ggCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATC‑TCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGgcg < 1:2190141/100‑1 (MQ=255) gCTTGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGgcg < 2:165723/100‑1 (MQ=255) cTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCGTTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGATTTATCgac > 1:2081473/1‑96 (MQ=255) cTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGgcgc < 1:3016483/100‑1 (MQ=255) cTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGgcgc > 1:989305/1‑100 (MQ=255) cTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGgcgc > 1:14394/1‑100 (MQ=255) cTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATC‑TCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCt < 2:2356978/100‑1 (MQ=255) ggCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATC‑TCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGtt < 2:980399/100‑1 (MQ=255) gCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGtt < 2:3261455/100‑1 (MQ=255) gCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGtt < 2:2338800/100‑1 (MQ=255) cAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTa < 2:2192799/100‑1 (MQ=255) aTACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATC‑TCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAAtt < 1:3602398/100‑1 (MQ=255) aCCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTg < 2:1165031/100‑1 (MQ=255) aCCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTg < 2:208338/100‑1 (MQ=255) cccGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTgg > 1:487395/1‑100 (MQ=255) cccGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTgg > 2:1581484/1‑100 (MQ=255) cGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTc < 2:1399432/100‑1 (MQ=255) cACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGc > 2:459418/1‑100 (MQ=255) aCCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCt < 2:718240/100‑1 (MQ=255) ntACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTa > 1:3858332/2‑100 (MQ=255) gTACAAGGCGGGCTATCTCATGTACCCGGTCATGAGCTGTGGCGCGCGGACCGTTTTTTGCATTTTCACGGTTTATCGGCGCCGTTAATTGGTCGGttt < 1:3651430/99‑1 (MQ=255) gTACAAAACTGGCTATCTCATTTACCCGCGCATTATC‑TCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTAt > 2:327449/1‑100 (MQ=255) tACAAAAGTGGATATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAAAACGGTTTATCGGCGCTGTTAATTGGTCGCTTTAt > 1:2030865/1‑100 (MQ=255) tACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTAt < 2:1968354/100‑1 (MQ=255) aCAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTAtt > 2:1424344/1‑100 (MQ=255) aCAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTAtt > 2:1288899/1‑100 (MQ=255) cAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTg > 2:2868499/1‑100 (MQ=255) aaaCTGGGTATCTCATTTACCCGCGTATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCg < 1:837636/100‑1 (MQ=255) aaaCTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCg < 1:409705/100‑1 (MQ=255) cTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGttt < 2:440183/100‑1 (MQ=255) ggCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATATACTCTGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGt > 1:1673050/1‑100 (MQ=255) ggCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGt > 1:637459/1‑100 (MQ=255) gCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTc > 2:332767/1‑100 (MQ=255) atATCTCATTTCCACGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCAGTTAATTGGTCGCTTTATTGCGTTTGTCa > 2:1686100/2‑100 (MQ=255) tATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTTTTTTTTTTTTTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAg > 1:3860735/1‑100 (MQ=255) tATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAg < 2:529456/100‑1 (MQ=255) tATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAg < 1:3062059/100‑1 (MQ=255) aTCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAgc < 1:2496689/100‑2 (MQ=255) aTCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGa < 1:3388281/100‑1 (MQ=255) tctcATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGaa < 2:934593/100‑1 (MQ=255) tctcATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGaa > 2:484095/1‑100 (MQ=255) ctcATCTCCCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAATCACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGCac < 1:909626/100‑1 (MQ=255) cATTTACCCGCGCATTATCATCAACGCGGACAACATCTTTTTCATAAACACGGTTAATCTGAACTGTTAATTGTCCGCTTTATGGCGTTTTTCAGacc > 1:2352822/1‑96 (MQ=255) cccGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGCACACtgctgc > 2:2334394/1‑100 (MQ=255) cccGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCCCTGTTAATTTGTCGCTATATTGCTTTTGTCAGAACACtgctgc > 1:3699884/1‑100 (MQ=255) ccGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTccc > 1:2520334/1‑100 (MQ=255) cgcgCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCcg > 1:18741/1‑100 (MQ=255) gcgcATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCcga > 2:1531198/1‑100 (MQ=255) cgcATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCcgac < 2:3406824/100‑1 (MQ=255) gcATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGCACACTGCTGCcgacg < 2:3758045/100‑1 (MQ=255) aTTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGAt > 1:478145/1‑100 (MQ=255) aTTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGAt > 1:969794/1‑100 (MQ=255) atcatcAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGATTGc > 1:1353984/1‑100 (MQ=255) tcatcaACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGATTGcc > 1:1813303/1‑100 (MQ=255) catcaACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGATTGCCg > 1:2810276/1‑100 (MQ=255) atcaACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGATTGCCgg > 2:3604034/1‑100 (MQ=255) atcaACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGATTGCCgg > 2:3462739/1‑100 (MQ=255) | CCGCCAGCCTCGGCTGCTGGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGATTGCCGG > NC_000913/3248005‑3248203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |