| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,390,016:1 | +C | 17.2% | intergenic (+52/+32) | yfbP → / ← nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,390,016 | 1 | . | C | 17.2% | 579.3 / 130.0 | 169 | intergenic (+52/+32) | yfbP/nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Reads supporting (aligned to +/- strand): ref base . (55/85); new base C (13/16); total (68/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-01 | |||||||||||
Only 100 of 176 total aligned reads displayed.
CAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTA > NC_000913/2389917‑2390115 | aGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑t > 2:2373427/1‑100 (MQ=255) aGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑t > 1:140865/1‑100 (MQ=255) aGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑t < 2:1752119/100‑1 (MQ=255) gTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tc < 1:2143041/100‑1 (MQ=255) tATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcgg < 1:995295/100‑1 (MQ=255) tGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcggcg > 1:2687177/1‑100 (MQ=255) gTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcggcgg < 2:1298261/100‑1 (MQ=255) gTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcggcgg > 2:1187156/1‑100 (MQ=255) tttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcggt > 1:2778278/1‑99 (MQ=255) tttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcggt < 2:1517176/100‑2 (MQ=255) atcttATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑ttt < 1:3278517/96‑1 (MQ=255) agagTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTCGGCGG‑t‑ttt < 2:2778301/100‑1 (MQ=255) agagTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACGATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTCGGCGG‑t‑ttt < 2:370688/100‑1 (MQ=255) gagTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTc < 2:2910623/100‑1 (MQ=255) gagTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAGCCGCCGA‑CATGCTCGGCGG‑t‑ttttc < 2:778357/100‑3 (MQ=25) gTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTg < 1:575879/100‑1 (MQ=255) gTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTg < 1:254568/100‑1 (MQ=255) gTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTg < 2:619976/100‑1 (MQ=255) gTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTCGGCGG‑t‑ttttct < 1:844752/100‑4 (MQ=38) tATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTATGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTg < 1:439367/99‑1 (MQ=255) ttttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACt > 2:1753007/1‑100 (MQ=255) ttttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACt < 1:3073083/100‑1 (MQ=255) ttttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAGCCGCCGA‑CATGCTCGGCGG‑t‑ttttctgaaa < 2:3403868/100‑8 (MQ=21) tttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAGCCGCCGA‑CATGCTCGGCGG‑t‑ttttctgaaaa < 1:818564/100‑9 (MQ=18) ttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAGCCGCCGA‑CATGCTCGGCGG‑t‑ttttctgaaaaa < 1:739070/100‑10 (MQ=18) ttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAGCCGCCGA‑CATGCTCGGCGG‑t‑ttttctgaaaaa < 2:331743/100‑10 (MQ=18) ttGGCGATAGTCGTACACAGTTCACGTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAGCCGCCGA‑CATGCTCGGCGG‑t‑ttttctgaaaaa < 2:889770/100‑10 (MQ=18) tGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAACCGCCGA‑CATGCTCGGCGG‑t‑ttttctgaaaaag < 2:1822985/100‑11 (MQ=21) ggCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACa > 2:3272113/1‑100 (MQ=255) cGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACaaa > 2:3869757/1‑100 (MQ=255) gATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAg < 2:2159516/100‑1 (MQ=255) aTAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGt < 1:2494966/100‑1 (MQ=255) aTAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGt < 2:2224136/100‑1 (MQ=255) tCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTTATTTTATCCGCCGAGTATG‑TCGGCGG‑C‑TTTCTGACTTACAAAATAACa > 1:3027005/1‑100 (MQ=255) tCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACa < 2:459855/100‑1 (MQ=255) cGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAg < 2:1952451/100‑1 (MQ=255) cGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAg > 1:2287232/1‑100 (MQ=255) cGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAg < 1:1775399/100‑1 (MQ=255) cacaGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTa < 1:1629691/100‑1 (MQ=255) cacaGTTCACTTAACGCTCTGCGTCTATCTACTAGCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCTGCGG‑C‑TTTCTGACTTACTAAGTAACAGATTa < 2:2614061/100‑1 (MQ=255) acaGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTAc < 1:2976296/100‑1 (MQ=255) caGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACa > 1:1500586/1‑100 (MQ=255) cACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGc > 2:136407/1‑100 (MQ=255) aCTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCg > 2:3833808/1‑100 (MQ=255) aCTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCg < 1:245316/100‑1 (MQ=255) aCTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCg < 2:140725/100‑1 (MQ=255) tAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCa > 2:54023/1‑100 (MQ=255) tAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCa > 2:1915584/1‑100 (MQ=255) gCTCTGCGTCTATCTACTATCACTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGc < 1:811728/100‑1 (MQ=255) tctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCa < 1:2683292/100‑1 (MQ=255) tctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCa > 1:397926/1‑100 (MQ=255) tctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGAATTACAAACTAACAGAATACATCAGCGGCATTGCCa > 1:1085556/1‑100 (MQ=255) tGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCaaa < 2:1494488/100‑1 (MQ=255) tGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCaaa < 2:642866/100‑1 (MQ=255) tctatctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGca < 1:2517247/100‑1 (MQ=255) atctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACaa > 2:1660484/1‑100 (MQ=255) tctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAAt < 2:3569443/100‑1 (MQ=255) tctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAAt < 1:2120003/100‑1 (MQ=255) tctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAAt < 2:352355/100‑1 (MQ=255) ctactaTCCCTTCTTTTTCATTTTATCTTCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATg > 1:1188516/1‑100 (MQ=255) ctactaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATg > 2:1008503/1‑100 (MQ=255) tactaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGc < 1:1483374/100‑1 (MQ=255) actaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCt < 2:3342364/100‑1 (MQ=255) aTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAAt < 2:3286307/100‑1 (MQ=255) cccTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCa < 1:3619043/100‑1 (MQ=255) ccTGCTTGTTCAGAACAAGCGCCTAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTTACAGATTAAATCAGCGGCATTGCCAAACGCAGAATGCTAATCa < 1:3819869/99‑1 (MQ=255) ttcttTTTCAGAAAAACTGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCg < 1:89374/100‑1 (MQ=255) ttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCg < 2:3150136/100‑1 (MQ=255) tcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCgg > 1:537941/1‑100 (MQ=255) ttttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtg > 2:3164206/1‑100 (MQ=255) tttCAGACAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTCCATCAGCTGCATTGCCAAACGCACAATGCTAATCAGCgg > 1:3291940/1‑96 (MQ=255) tttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgt > 1:1348732/1‑100 (MQ=255) agtcagaaagccgccgA‑CATGCTCGGCGG‑TTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgt > 2:2074872/11‑100 (MQ=21) agtcagaaagCCGCCGA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgt > 2:1144159/7‑100 (MQ=21) tCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg < 2:1989958/100‑1 (MQ=255) tCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg < 2:1312256/100‑1 (MQ=255) tcagaaagCCGCCGA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAGCAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg > 1:2898594/5‑100 (MQ=21) cAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGc > 2:3684114/1‑100 (MQ=255) cagaaagccgccgA‑CATGCTCGGCGG‑TTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGc > 2:98527/8‑100 (MQ=25) aGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGcc > 2:257812/1‑100 (MQ=255) gAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCa < 2:1465028/100‑1 (MQ=255) gaaagCCGCCGA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCa > 2:211215/2‑100 (MQ=25) aaaaaCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCAt > 1:2994026/1‑100 (MQ=255) aaaaCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATa > 1:2015718/1‑100 (MQ=255) aaaaCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATa > 2:3595561/1‑100 (MQ=255) gccgccgA‑CATGCTCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATacac > 2:1281569/2‑100 (MQ=255) aCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATacac > 2:3473970/1‑100 (MQ=255) gccgTGCATG‑TCGGCGT‑G‑TTTCTGACTTCCCAAGTAACAGATTACATCAGCGGCATTGCCAAACGCAAAATGCTAATCAGCGGTTGTGGCCATACACCCa < 1:1417943/100‑1 (MQ=255) gccgAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCa > 1:628692/1‑100 (MQ=255) gccgAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCa > 1:2601712/1‑100 (MQ=255) cgAGCATG‑TCGGCGG‑C‑TTTCTGACTCATAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGc > 1:1435002/1‑100 (MQ=255) gAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCa < 1:3724830/100‑1 (MQ=255) gAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCa < 2:3457660/100‑1 (MQ=255) aGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAc < 1:3799021/100‑1 (MQ=255) aGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAc < 2:3875745/100‑1 (MQ=255) gCATG‑TCGGCGT‑C‑TGGCTGACTTAAATGGGGAGGGATTACGTCAGCGGCAGGGCCAAACGCACAATGCTAATCAGCGGGTGTGGCGATACACCCAGCAcc < 1:3115577/100‑1 (MQ=255) gCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGc < 2:2422795/97‑1 (MQ=255) gCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAcc < 2:2753929/100‑1 (MQ=255) gCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAcc > 2:3421716/1‑100 (MQ=255) g‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTa < 1:1150374/100‑1 (MQ=255) | CAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTA > NC_000913/2389917‑2390115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |