New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 277706NA (NA)10 (0.080) 8/164 NT NA noncoding (32/67 nt) REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 277737 NA (NA)noncoding (63/67 nt) REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 182 total aligned reads displayed.

CACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAA  >  NC_000913/277608‑277807
                                                                                                  |                                                                                                     
cACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTg                                                                                                      >  2:3745028‑M1/1‑99 (MQ=255)
  cGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTgcc                                                                                                    <  2:2779052‑M1/100‑4 (MQ=255)
   gCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTgccg                                                                                                   <  2:2333408‑M1/100‑5 (MQ=255)
    ccTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTgccgg                                                                                                  >  1:2422215‑M1/1‑95 (MQ=255)
          gATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATggcg                                                                                            >  2:3191356/1‑100 (MQ=255)
              tCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGcac                                                                                        <  2:1452746/100‑1 (MQ=255)
               cgccgcGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTCGGCCTGATACGCGCAGCGCAACAGGCATTGCCGGATGGCGGcaca                                                                                       >  1:1656772/1‑100 (MQ=255)
               cgccgcGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGcaca                                                                                       >  2:2133035/1‑100 (MQ=255)
               cgccgcGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGcaca                                                                                       >  2:1331401/1‑100 (MQ=255)
                gccgcGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACaa                                                                                      >  1:1039327/1‑100 (MQ=255)
                gccgcGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACaa                                                                                      >  2:1889032/1‑100 (MQ=255)
                 ccgcGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAg                                                                                     <  2:47296/100‑1 (MQ=255)
                  cgcgTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAg                                                                                     <  1:3081021/99‑1 (MQ=255)
                    cgTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAgcgc                                                                                  >  2:2479357/1‑100 (MQ=255)
                     gTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGcc                                                                                 >  1:1171469/1‑100 (MQ=255)
                      ttAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCt                                                                                >  1:2300169/1‑100 (MQ=255)
                      ttAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCt                                                                                <  1:974858/100‑1 (MQ=255)
                             cgcgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGG                                                                         <  2:2601573‑M2/100‑1 (MQ=255)
                               cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                       <  2:1491934/100‑1 (MQ=255)
                               cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                       <  1:1835853/100‑1 (MQ=255)
                               cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                       <  1:2985/100‑1 (MQ=255)
                                gAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTgccggataaggcgcttgtgccgccatccggcaa                                                                      <  2:846151‑M1/100‑34 (MQ=255)
                                gAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCt                                                                      <  1:1369665/100‑1 (MQ=255)
                                gAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCt                                                                      >  1:3109509/1‑100 (MQ=255)
                                gAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCt                                                                      <  1:3563043/100‑1 (MQ=255)
                                 aaGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTgccggataaggcgcttgtgccgccatccggcaat                                                                     <  2:2646568‑M1/100‑35 (MQ=255)
                                   gCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACa                                                                   >  2:1071771/1‑100 (MQ=255)
                                    cTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaa                                                                  >  2:1745136/1‑100 (MQ=255)
                                      gAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTgccggataaggcgcttgtgccgccatccggcaatgcctg                                                                <  1:1905896‑M1/100‑40 (MQ=255)
                                      gAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaaa                                                                >  1:3575309/1‑100 (MQ=255)
                                       aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                               <  2:3117849/100‑1 (MQ=255)
                                        gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                              >  2:1594998/1‑100 (MQ=255)
                                           tttATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTgccggataaggcgcttgtgccgccatccggcaatgcctgatgcg                                                           <  2:1862782‑M1/100‑45 (MQ=255)
                                            ttATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACaa                                                          >  2:1612838/1‑100 (MQ=255)
                                            ttATCGGGTCTACATCGTGCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACaa                                                          <  1:3807232/100‑1 (MQ=255)
                                              aacGGGTCTACATCGTTCATTGTAGGCCTGATTAGCGCCGCCCATCAGGCATTGCCAGATGGTGGCACAATCGCCTTAGCCGGCCTACAAAACCACaaa                                                         <  1:316063/97‑1 (MQ=255)
                                               tCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAAc                                                       <  2:2075551/100‑1 (MQ=255)
                                                cGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACg                                                      <  1:2353268/100‑1 (MQ=255)
                                                 gggTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGt                                                     <  2:916337/100‑1 (MQ=255)
                                                  ggTCTACATCGTTCATTGTAGGCCTGATAAGCGCGGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGtt                                                    >  1:1481972/1‑100 (MQ=255)
                                                  ggTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGtt                                                    <  1:3823718/100‑1 (MQ=255)
                                                    tCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTAt                                                  <  1:787095/100‑1 (MQ=255)
                                                    tCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTAt                                                  <  1:3456526/100‑1 (MQ=255)
                                                     cTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATg                                                 >  2:1784599/1‑100 (MQ=255)
                                                      tACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGc                                                >  2:947199/1‑100 (MQ=255)
                                                      tACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGc                                                >  1:907176/1‑100 (MQ=255)
                                                        cATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCg                                              >  2:3449512/1‑100 (MQ=255)
                                                        cATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCg                                              <  2:669912/100‑1 (MQ=255)
                                                           cGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCAt                                           >  2:1109820/1‑100 (MQ=255)
                                                            gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATc                                          >  1:605942/1‑100 (MQ=255)
                                                            gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATc                                          >  2:1408283/1‑100 (MQ=255)
                                                            gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATc                                          >  1:2625095/1‑100 (MQ=255)
                                                            gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATc                                          <  1:1095848/100‑1 (MQ=255)
                                                            gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATc                                          >  2:2975174/1‑100 (MQ=255)
                                                                aTTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGcc                                      <  2:478287/100‑1 (MQ=255)
                                                                aTTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGcc                                      <  1:2051581/100‑1 (MQ=255)
                                                                   gTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGa                                   <  2:1221401/100‑1 (MQ=255)
                                                                   gTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGa                                   <  1:3357631/100‑1 (MQ=255)
                                                                     aGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaac                                 <  2:1965581/100‑1 (MQ=255)
                                                                      ggCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaaca                                >  1:1317939/1‑100 (MQ=255)
                                                                       gCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaa                               >  2:542990/1‑100 (MQ=255)
                                                                       gCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaa                               >  2:2507933/1‑100 (MQ=255)
                                                                        ccTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaa                              <  2:236856/100‑1 (MQ=255)
                                                                         cTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaac                             <  1:990086/100‑1 (MQ=255)
                                                                         cTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaac                             <  2:797698/100‑1 (MQ=255)
                                                                           gATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaaca                            <  1:2141276/99‑1 (MQ=255)
                                                                             tAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGTACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGc                         <  1:2736420/100‑1 (MQ=255)
                                                                              aaGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGcc                        <  1:2703042/100‑1 (MQ=255)
                                                                               agcgcagcgcATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCg                       >  2:3406864/1‑100 (MQ=255)
                                                                               agcgcagcgcATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCg                       <  2:693424/100‑1 (MQ=255)
                                                                               agcgcagcgcATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCg                       >  1:2889109/1‑100 (MQ=255)
                                                                                gcgcagcgcgTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCg                       <  2:2983502/99‑1 (MQ=255)
                                                                                gcgcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGt                      <  1:1109812/100‑1 (MQ=255)
                                                                                  gcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTAc                    >  2:3304691/1‑100 (MQ=255)
                                                                                   cagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACg                   <  2:3693524/100‑1 (MQ=255)
                                                                                    agcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgg                  <  1:2295088/100‑1 (MQ=255)
                                                                                      cgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCGTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggat                <  2:3861953/100‑1 (MQ=255)
                                                                                       gcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg               <  1:44165/100‑1 (MQ=255)
                                                                                       gcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg               <  1:3277168/100‑1 (MQ=255)
                                                                                       gcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg               <  1:3429905/100‑1 (MQ=255)
                                                                                         aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccc             <  2:1074589‑M2/100‑60 (MQ=255)
                                                                                         aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACGAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatgga             >  1:2748341/1‑100 (MQ=255)
                                                                                           cAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctc           <  1:1905896‑M2/100‑62 (MQ=255)
                                                                                           cAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCCGAACAAACATGCCGTACGGATGGAtt           >  1:1978198/1‑100 (MQ=255)
                                                                                            aGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAttt          >  1:181410/1‑100 (MQ=255)
                                                                                            aGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAttt          >  2:8336/1‑100 (MQ=255)
                                                                                             ggCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTc         <  2:2042668/100‑1 (MQ=255)
                                                                                              gCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagc        <  1:3458593‑M2/100‑65 (MQ=255)
                                                                                               cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagct       <  1:2835142‑M2/100‑66 (MQ=255)
                                                                                               cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCaa       >  2:3240332/1‑100 (MQ=255)
                                                                                               cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCaa       <  2:3576015/100‑1 (MQ=255)
                                                                                               cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCaa       <  2:3354645/100‑1 (MQ=255)
                                                                                                aTTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctccgctt      <  1:3127384‑M2/100‑67 (MQ=255)
                                                                                                aTTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAg      >  2:890591/1‑100 (MQ=255)
                                                                                                 ttGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttc     <  2:2179047‑M2/100‑68 (MQ=255)
                                                                                                 ttGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGa     <  1:1055159/100‑1 (MQ=255)
                                                                                                  tGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGat    >  2:3548593/1‑100 (MQ=255)
                                                                                                  tGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGat    >  2:3013196/1‑100 (MQ=255)
                                                                                                  tGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTAAAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGat    <  2:827566/100‑1 (MQ=255)
                                                                                                  tGCCGGATGGCGGCACAAGCGCC‑‑ATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcg  <  1:810548‑M2/100‑71 (MQ=255)
                                                                                                  |                                                                                                     
CACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAA  >  NC_000913/277608‑277807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.