New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4557056114 (0.810)14 (0.110) 8/162 NT 11.3% coding (64/393 nt) iraD RpoS stabilzer after DNA damage, anti‑RssB factor
?NC_000913 = 4557068 116 (0.910)coding (76/393 nt) iraD RpoS stabilzer after DNA damage, anti‑RssB factor
Rejected: Frequency below cutoff threshold.

Only 100 of 185 total aligned reads displayed.

AGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATA  >  NC_000913/4556957‑4557155
                                                                                                   |                                                                                                   
 gCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCg                                                                                                    <  1:1414236/100‑1 (MQ=255)
   cGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTa                                                                                                  <  2:2840926/100‑1 (MQ=255)
       tatGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTTTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATc                                                                                              <  2:3557840/100‑1 (MQ=255)
        cgatctcTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCg                                                                                             <  1:96610/94‑1 (MQ=255)
          gTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGt                                                                                           >  2:2077115/1‑100 (MQ=255)
          gTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTAAGGCAATAAAACGTCATCGCTGCGTAAATCGGt                                                                                           >  2:952148/1‑100 (MQ=255)
           ttGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTa                                                                                          >  2:3154844/1‑100 (MQ=255)
            tGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTAt                                                                                         <  2:1386874/100‑1 (MQ=255)
              cTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATgc                                                                                       >  1:289816‑M2/1‑98 (MQ=255)
               tAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATgca                                                                                      <  2:2386515‑M2/100‑4 (MQ=255)
                 aaCGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCataccgatttacgcagc                                                                                    <  1:2100952‑M1/100‑18 (MQ=255)
                   cGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATgcagcga                                                                                  <  1:30583‑M2/100‑8 (MQ=255)
                    gTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCataccgattaacgcagcgat                                                                                 <  1:2640850‑M1/100‑21 (MQ=255)
                     tCAGGAGTTCTCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATgcagcgatt                                                                                >  1:1342560‑M2/1‑91 (MQ=255)
                     tCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCataccgatttacgcagcgatg                                                                                <  2:406782‑M1/100‑22 (MQ=255)
                     tCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGAtc                                                                                <  1:3417642/100‑1 (MQ=255)
                      cAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCTCTGCGTAAATCGGTATGCAGCGAtct                                                                               <  1:3503657/100‑1 (MQ=255)
                      cAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCataccgatttacgcagcgatga                                                                               <  1:3360645‑M1/100‑23 (MQ=255)
                      cAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCataccgatttacgcagcgatga                                                                               <  2:2889752‑M1/100‑23 (MQ=255)
                       aGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCataccgatttacgcagcgatgac                                                                              <  2:132791‑M1/100‑24 (MQ=255)
                       aGGAGTGCGAAAAAGGATGCGACAATCACTTCATGCTATTTTACCTGAAAGTTCAGGCAATAATACGTCATCGCTGCataccgatttacgcagcgatg                                                                                <  1:328108‑M1/98‑22 (MQ=255)
                        ggAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCataccgatttacgcagcgatgacg                                                                             <  2:237855‑M1/100‑25 (MQ=255)
                        ggAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATctcc                                                                             <  2:3697380/100‑1 (MQ=255)
                          aGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCataccgatttacgcagcgatgacgtt                                                                           <  1:1059551‑M1/100‑27 (MQ=255)
                          aGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGACAATAAAACGTCATCGCTGCataccgatttacgcagcgatgacg                                                                             <  1:1137247‑M1/98‑25 (MQ=255)
                           gTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCataccgatttacgcagcgatgacgttt                                                                          <  2:2129235‑M1/100‑28 (MQ=255)
                             gcgcAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAct                                                                        >  2:3244435/1‑100 (MQ=255)
                             gcgcAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAct                                                                        >  2:2146828/1‑100 (MQ=255)
                                cAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCtt                                                                     >  2:3193464/1‑100 (MQ=255)
                                cAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCtt                                                                     >  1:1958888/1‑100 (MQ=255)
                                cAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAAGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCtt                                                                     >  1:2148882/1‑100 (MQ=255)
                                aaaaaTGATGCGACAATCACTTCAGGCTGGATTACCTGAAATTGCAGGCAATAAAACGTCATCGCTGCGTAACCCGGTATGCAGCGATCTCCTCAc                                                                         <  1:796397/95‑1 (MQ=255)
                                   aaTGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCttttt                                                                  <  2:3605879/100‑1 (MQ=255)
                                   aaTGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCttttt                                                                  <  2:1349784/100‑1 (MQ=255)
                                   aaTGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCttttt                                                                  <  2:30583/100‑1 (MQ=255)
                                     tgatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTaa                                                                <  1:1474371/100‑1 (MQ=255)
                                     tgatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTaa                                                                <  2:2057967/100‑1 (MQ=255)
                                     tgatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTaa                                                                <  2:3409444/100‑1 (MQ=255)
                                      gatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAAt                                                               <  2:1843677/100‑1 (MQ=255)
                                      gatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAAt                                                               <  1:2835207/100‑1 (MQ=255)
                                      gatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAAt                                                               <  2:87919/100‑1 (MQ=255)
                                        tgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTACTtc                                                             >  1:1390493/1‑100 (MQ=255)
                                         gCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATtct                                                            <  1:3208096/100‑1 (MQ=255)
                                         gCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATtct                                                            <  1:1200876/100‑1 (MQ=255)
                                           gACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTctcc                                                          <  2:1252863/100‑1 (MQ=255)
                                           gACAATCACTCCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTctcc                                                          <  1:1313539/100‑1 (MQ=255)
                                             tgctCACTTCAGGGTAGCTTACCTGAAATGTGAGGCAACAAAACGGCGTTGCTGCTTAAATCGCTATGCAGCGTTTTCCGCACTCTTTTTAATTctcctc                                                        <  1:3424218/97‑1 (MQ=255)
                                                  aCTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCg                                                   >  2:3361580/1‑100 (MQ=255)
                                                   ctccAGGCGGTTTTACTTGAAATTTGAGGCAAGAAAACGTCATCTCTTCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCgg                                                  >  1:569385/4‑100 (MQ=255)
                                                   cTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCgg                                                  <  2:1690095/100‑1 (MQ=255)
                                                       aGGCTGTTTTACCTGAAATTTCAGGCAATTAATCGTCTTCGTTGCGTAAATTTGTATGTAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCAtt                                              <  1:2306446/100‑1 (MQ=255)
                                                        ggCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTa                                             >  1:661906/1‑100 (MQ=255)
                                                           tGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCg                                          <  2:3165511/100‑1 (MQ=255)
                                                           tGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCg                                          >  1:2203937/1‑100 (MQ=255)
                                                             ttttACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTc                                        <  1:3826736/100‑1 (MQ=255)
                                                               ttACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCAt                                      <  2:1063281/100‑1 (MQ=255)
                                                                tACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCAtt                                     >  2:3010454/1‑100 (MQ=255)
                                                                tACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCAtt                                     >  2:736132/1‑100 (MQ=255)
                                                                 aCCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTa                                    >  2:492300/1‑100 (MQ=255)
                                                                   cTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACt                                  >  2:3321448/1‑100 (MQ=255)
                                                                   cTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGAAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACt                                  >  1:1870303/1‑100 (MQ=255)
                                                                     gAAATTTCACGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTg                                <  1:747991/100‑1 (MQ=255)
                                                                       aaTTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGtt                              >  2:3740074/1‑100 (MQ=255)
                                                                          ttCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTCCTTGTTTCa                           >  1:1759860/1‑100 (MQ=255)
                                                                            cAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAgg                         <  2:833488/100‑1 (MQ=255)
                                                                            cAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCCTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAgg                         <  2:2237172/100‑1 (MQ=255)
                                                                             aGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGc                        >  2:2275884/1‑100 (MQ=255)
                                                                             aGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGc                        <  2:2299833/100‑1 (MQ=255)
                                                                             aGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGc                        >  1:2316495/1‑100 (MQ=255)
                                                                             aGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGc                        <  1:2728048/100‑1 (MQ=255)
                                                                              ggCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGAGCTCCTCACTCTTTTTAATTCTCCTCATTAGACATTACCGACATTACTTGTTTCAGGCa                       >  1:3295401/1‑100 (MQ=255)
                                                                                   tAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGccc                  >  1:2602786/1‑100 (MQ=255)
                                                                                    aaaaCGTCATCGCTGCGTAAATCGGTATGCAGCGACCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATCCCCg                 >  1:2412962/1‑100 (MQ=255)
                                                                                     aaaCGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGa                >  2:2582728/1‑100 (MQ=255)
                                                                                     aaaCGTCATCGCTGCGTAAATCGGTATGCAGCGAGCGCCTCACTCTTTTTAATTCTTCTCATTCGGCATTACCTTCATTACTTGTTTCAGGCATGCCCg                 >  1:369862/1‑99 (MQ=255)
                                                                                      aaCGTCATCGCTGCGTAAATCGGTATgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcact               <  1:1059551‑M2/100‑75 (MQ=255)
                                                                                       aCGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGt              <  1:2683394/100‑1 (MQ=255)
                                                                                        cGTCATCGCTGCGTAAATCGGTATgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcc             <  2:237855‑M2/100‑77 (MQ=255)
                                                                                        cGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTg             <  2:2498835/100‑1 (MQ=255)
                                                                                        cGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTg             >  2:1512404/1‑100 (MQ=255)
                                                                                           cATCGCTGCGTAAATCGGTATgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctga          <  2:406782‑M2/100‑80 (MQ=255)
                                                                                            aTCGCTGCGTAAATCGGTTTgcagcgatgacgttttattgcctgaaatttcaggtaaaacaccctgaagtgattgtcgcatcattttgcgcactcctg           <  1:1102422‑M2/98‑79 (MQ=255)
                                                                                            aTCGCTGCGTAAATCGGTATgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgtgtactcctgac         <  2:2584775‑M2/100‑81 (MQ=255)
                                                                                            aTCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCa          <  2:14108/99‑1 (MQ=255)
                                                                                             tCGCTGCataccgatttacgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctgacg        <  1:30583‑M1/100‑94 (MQ=255)
                                                                                             tCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAg        >  2:1941930/1‑100 (MQ=255)
                                                                                               gatgcGTAAATCGGTATgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctgacgtt      <  2:2632423‑M2/98‑84 (MQ=255)
                                                                                                cTGCataccgatttacgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctgacgttt     >  1:3784314‑M1/1‑4 (MQ=255)
                                                                                                cTGCataccgatttacgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctgacgttt     >  2:3123821‑M1/1‑4 (MQ=255)
                                                                                                cTGCataccgatttacgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctgacgttt     <  1:3166048‑M1/100‑97 (MQ=255)
                                                                                                cTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGc     <  1:801484/100‑1 (MQ=255)
                                                                                                cTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGc     >  2:2819937/1‑100 (MQ=255)
                                                                                                 tGCataccgatttacgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctgacgttta    >  1:3578998‑M1/1‑3 (MQ=255)
                                                                                                 tGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCa    <  1:3740044/100‑1 (MQ=255)
                                                                                                 tGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCa    <  2:331088/100‑1 (MQ=255)
                                                                                                  gCataccgatttacgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctgacgtttag   <  2:2898823‑M1/100‑99 (MQ=255)
                                                                                                  gCataccgatttacgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctgacgtttag   <  1:482882‑M1/100‑99 (MQ=255)
                                                                                                  gCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCAt   >  2:3537644/1‑100 (MQ=255)
                                                                                                   cataccgatttacgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctgacgtttagc  >  1:1658050‑M1/1‑1 (MQ=255)
                                                                                                   cataccgatttacgcagcgatgacgttttattgcctgaaatttcaggtaaaacagcctgaagtgattgtcgcatcattttgcgcactcctgacgtttagc  <  1:79074‑M1/100‑100 (MQ=255)
                                                                                                   |                                                                                                   
AGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATA  >  NC_000913/4556957‑4557155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.