BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	409056 =	NA (NA)	10 (0.080)	7/164	NT	NA	noncoding (5/37 nt)	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	409089 =	NA (NA)	10 (0.080)	7/164	NT	NA	intergenic (+139/+19)	ykiA/rdgC	pseudogene/nucleoid‑associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function

Only 100 of 201 total aligned reads displayed.

ATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGAAATC  >  NC_000913/408990‑409188

taattcaaaacctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCa                                                                                                     >  1:3360887‑M1/67‑100 (MQ=255)

     gctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTaaa                                                                                                >  1:3789546/1‑100 (MQ=255)

     gctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTaaa                                                                                                <  1:3668210/100‑1 (MQ=255)

      ctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAg                                                                                               <  2:636004/100‑1 (MQ=255)

      ctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAg                                                                                               <  2:3405598/100‑1 (MQ=255)

      aaaacctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAg                                                                                               >  2:1008109‑M1/61‑100 (MQ=255)

        gcgcTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGa                                                                                             >  2:2215911/1‑100 (MQ=255)

         cgcTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTCTGGCTTAGTACGCCGGATAAGACGAGGCAGGCGTCGCATCCGGCATTAAAGGaa                                                                                            <  1:154004/100‑1 (MQ=255)

          gcTAAAAATTATTGCTCGCCGTAGCGTATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATATGAATCGGCAGGGGTCGCATCCGGCATTTAAGTaaa                                                                                           >  1:2225872/1‑100 (MQ=255)

          gcTAAAAATTATTGCTCGCCGTAGCGAATACTTATATGCCTGGTGTGGCTTCGTACGCCGGATAACACGCGGCAGGCGTCGCATCCGGCCTTAAAGGgaa                                                                                           >  1:2370937/1‑100 (MQ=39)

            tAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAAt                                                                                         >  1:869279/1‑100 (MQ=255)

               aaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAg                                                                                      <  2:3185664/100‑1 (MQ=255)

               aaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAg                                                                                      <  2:3176594/100‑1 (MQ=255)

               aaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAg                                                                                      >  1:1670814/1‑100 (MQ=255)

                 attattGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCa                                                                                    <  1:3568087/100‑1 (MQ=255)

                  tttatGCTAGCCGTAGCGAATAATTATATGCCTGGTGTAGCTTCTTACGCCGGATAAAACGCGGCAGGCGTCGCAACCGGCATTAAAGGAAAATCAGCaa                                                                                   <  1:59421/96‑1 (MQ=255)

                  ttattGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCaa                                                                                   >  2:2542965/1‑100 (MQ=255)

                  ttattGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCaa                                                                                   >  1:2418211/1‑100 (MQ=255)

                       gCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAgatcggaag                                                                              >  2:2793523/1‑92 (MQ=255)

                       gCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAAc                                                                              >  1:277001/1‑100 (MQ=255)

                        cTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACg                                                                             >  2:1838651/1‑100 (MQ=255)

                        cTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACg                                                                             >  1:2923449/1‑100 (MQ=255)

                          cggcGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGtt                                                                           <  1:2999592/97‑1 (MQ=255)

                           gCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTtg                                                                          <  1:3263735/100‑1 (MQ=255)

                                agggAATAATTATCTGCCGGGTGTGGCTTCGTACGCCAGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTtgtg                                                                        <  1:2180451/94‑1 (MQ=38)

                                 gCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTc                                                                    >  2:1010881/1‑100 (MQ=255)

                                  cGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCg                                                                   <  1:478360/100‑1 (MQ=255)

                                   naagaatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGc                                                                  >  1:675565/5‑100 (MQ=255)

                                   gAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGc                                                                  <  2:1358395/100‑1 (MQ=255)

                                   gAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGc                                                                  >  1:196162/1‑100 (MQ=255)

                                    aataatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGcc                                                                 <  1:631398/100‑1 (MQ=255)

                                     ataatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCa                                                                >  2:3258527/1‑100 (MQ=255)

                                       aatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAcc                                                              >  1:2306114/1‑100 (MQ=255)

                                       aatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAcc                                                              <  2:1937786/100‑1 (MQ=255)

                                       aatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAcc                                                              <  2:887842/100‑1 (MQ=255)

                                             atGCCTGGTGTGGCTTCGTACGCCGGATGAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCTCCACCCAATcc                                                        >  1:1073464/1‑100 (MQ=255)

                                                ccTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTc                                                     >  1:1018055/1‑100 (MQ=255)

                                                ccTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTc                                                     >  1:2436912/1‑100 (MQ=255)

                                                 cTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCa                                                    <  1:3873796/100‑1 (MQ=255)

                                                 cTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCa                                                    <  2:2267176/100‑1 (MQ=255)

                                                      gtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAg                                               >  2:2371879/1‑100 (MQ=255)

                                                       tgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAgg                                              <  1:3812076/100‑1 (MQ=255)

                                                       tgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAgg                                              <  2:3154502/100‑1 (MQ=255)

                                                        ggCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAgg                                              >  1:764676/1‑99 (MQ=255)

                                                        ggCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGt                                             >  2:3245212/1‑100 (MQ=255)

                                                        ggCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGt                                             >  2:2015462/1‑100 (MQ=255)

                                                        ggCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGt                                             <  2:2749492/100‑1 (MQ=255)

                                                         gCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGtt                                            >  2:1326708/1‑100 (MQ=255)

                                                          cTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGttt                                           >  1:3582666/1‑100 (MQ=255)

                                                            tttaatgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGACAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCATTCAATCAGGTTTTg                                         >  1:400988‑M2/40‑100 (MQ=255)

                                                            tCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTg                                         <  1:1582952/100‑1 (MQ=255)

                                                             cGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGa                                        >  2:2049286/1‑100 (MQ=255)

                                                              gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa                                       <  2:3813294/100‑1 (MQ=255)

                                                              gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa                                       >  2:1832272/1‑100 (MQ=255)

                                                              gTACGCCGGATAAGACGCGGCAGGCGTCACATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa                                       <  2:1726188/100‑1 (MQ=255)

                                                               tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt                                      <  1:13279/100‑1 (MQ=255)

                                                               tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt                                      <  2:3572753/100‑1 (MQ=255)

                                                               aatgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt                                      >  2:2074760‑M2/37‑100 (MQ=255)

                                                                atgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAtt                                     >  1:3276407‑M2/36‑100 (MQ=255)

                                                                aCGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAtt                                     >  1:983185/1‑100 (MQ=255)

                                                                aCGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGACACCTAATCCTTCAATCAGGTTTTGAAtt                                     >  2:3321229/1‑100 (MQ=255)

                                                                  gccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTaa                                   >  2:206958‑M2/34‑100 (MQ=255)

                                                                  gccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTaa                                   >  1:2052785‑M2/34‑100 (MQ=255)

                                                                  GCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTaa                                   >  2:3317719‑M1/1‑100 (MQ=255)

                                                                    CGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACg                                 <  2:1518539‑M1/100‑1 (MQ=255)

                                                                    CGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACg                                 >  2:1020859‑M1/1‑100 (MQ=255)

                                                                       ATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTg                              >  1:100138‑M1/1‑100 (MQ=255)

                                                                        TAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGc                             <  2:146749‑M1/100‑1 (MQ=255)

                                                                         gcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGcc                            >  1:260309‑M2/27‑100 (MQ=255)

                                                                         aaGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGcc                            <  2:475650/100‑1 (MQ=255)

                                                                          aGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCa                           >  2:1882605/1‑100 (MQ=255)

                                                                          aGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCa                           >  1:938553/1‑100 (MQ=255)

                                                                          aGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCa                           >  2:56858/1‑100 (MQ=255)

                                                                           gACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAg                          >  2:2933986/1‑100 (MQ=255)

                                                                            aCGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGt                         <  2:444373/100‑1 (MQ=255)

                                                                             cgcgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGtt                        >  2:270648/1‑100 (MQ=255)

                                                                             cgcgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGtt                        >  1:1033153/1‑100 (MQ=255)

                                                                             cgcgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGtt                        >  2:3426992/1‑100 (MQ=255)

                                                                              gcgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTc                       <  1:1354908/100‑1 (MQ=255)

                                                                                 gCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcc                    <  1:1793763/100‑1 (MQ=255)

                                                                                 gCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcc                    <  1:1838642/100‑1 (MQ=255)

                                                                                 gCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcc                    <  2:755898/100‑1 (MQ=255)

                                                                                    ggcggcGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCan                  <  2:1350032/99‑2 (MQ=255)

                                                                                    ggCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTGACGTTGTGCTTCGCCACCTAATCCGTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGt                 <  1:3443969/100‑1 (MQ=255)

                                                                                     gCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtc                <  2:1784600/100‑1 (MQ=255)

                                                                                       ggcGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtc                <  2:1686541/96‑1 (MQ=255)

                                                                                       gTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGTGTTTGAATTAACACTGCCAGTTCACCAGtcat              >  1:3210926/1‑100 (MQ=255)

                                                                                       gTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcat              <  2:1413210/100‑1 (MQ=255)

                                                                                        tCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcatc             <  2:2106304/100‑1 (MQ=255)

                                                                                         cGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcatca            <  2:2201725/100‑1 (MQ=255)

                                                                                         cGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCCCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcatca            <  2:3210960/100‑1 (MQ=255)

                                                                                           cATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAgg          <  1:1170525/100‑1 (MQ=255)

                                                                                             tccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGAt        <  2:3744141‑M2/94‑1 (MQ=255)

                                                                                             tccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGAt        <  2:3276433‑M2/94‑1 (MQ=255)

                                                                                             tccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGAt        >  1:1436617‑M2/7‑100 (MQ=255)

                                                                                               cggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATg       <  1:2692891‑M2/95‑1 (MQ=255)

                                                                                               cggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGa      <  2:830144‑M2/96‑1 (MQ=255)

                                                                                               cggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAACTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTAACCAGTCATCAGAATGa      >  1:738670‑M2/5‑100 (MQ=255)

                                                                                                   aTTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGAAATc  >  2:2860419/1‑100 (MQ=255)

                                                                                                   aTTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGAAATc  >  1:588836/1‑100 (MQ=255)

ATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGAAATC  >  NC_000913/408990‑409188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.