BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2835067 =	NA (NA)	13 (0.100)	9/164	NT	NA	noncoding (1/82 nt)	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	2835099 =	NA (NA)	13 (0.100)	9/164	NT	NA	noncoding (33/82 nt)	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 188 total aligned reads displayed.

TCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTA  >  NC_000913/2835000‑2835198

 cGGATGAAAGAGGCATTTGGATTGGTGAAGACATTGCCGATGTAGGTGGGCTACTGTGCCTAAGATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                                                    <  1:3089080/100‑1 (MQ=255)

  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                                                    >  1:3725431/1‑99 (MQ=255)

  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                   >  2:1694736/1‑100 (MQ=255)

  catttggacaccattgccggatgcggcgtaaacgccttatgcggcctacacctgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                   >  1:3059689‑M1/66‑100 (MQ=255)

   gATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTAc                                                                                                  >  2:1342366/1‑100 (MQ=255)

   gATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTAc                                                                                                  >  1:786305/1‑100 (MQ=255)

      tggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACggg                                                                                               >  1:325905‑M1/62‑100 (MQ=255)

      gAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACggg                                                                                               <  2:3258119/100‑1 (MQ=255)

        aaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGa                                                                                             >  2:157337/1‑100 (MQ=255)

        aaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGa                                                                                             >  2:646042/1‑100 (MQ=255)

          gagGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGTTACTGTGCATAAAATGTCGGATGCGACGCTGGCGCGTCTGATCCGACCTACGGGGACg                                                                                           <  1:1135683/100‑1 (MQ=255)

          gagGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACg                                                                                           >  1:2846800/1‑100 (MQ=255)

          caccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACg                                                                                           >  2:1429507‑M1/58‑100 (MQ=255)

              cagttGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       <  1:1614216/97‑1 (MQ=255)

              cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       >  2:1719130/1‑100 (MQ=255)

              cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       >  2:469415/1‑100 (MQ=255)

              cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       >  2:755292/1‑100 (MQ=255)

              cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTAACCGACCTACGGGGACGCAtg                                                                                       <  1:2376466/100‑1 (MQ=255)

                tttGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtgtg                                                                                     <  1:746661/100‑1 (MQ=255)

                tttGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtgtg                                                                                     <  2:742126/100‑1 (MQ=255)

                 ccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGATGCGACGCTGACGCGTCTTATCCGAcctacggggagcgcatttg                                                                                    >  2:3043760‑M1/51‑91 (MQ=255)

                   ggATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAg                                                                                  <  1:1729132/100‑1 (MQ=255)

                   ggATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTCGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAg                                                                                  >  2:2720393/1‑100 (MQ=255)

                     aTTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGc                                                                                <  2:1376262/100‑1 (MQ=255)

                        gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCgg                                                                             >  2:2254949/1‑100 (MQ=255)

                        gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCgg                                                                             <  1:2862806/100‑1 (MQ=255)

                        gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCgg                                                                             <  2:2428613/100‑1 (MQ=255)

                        gttgAAAACATTGCCGATGTAGGGGGGCGACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTAGGCGACCTACGGGGACGCATGTGTAGGGCgg                                                                             <  1:2100978/100‑1 (MQ=37)

                         ttgAAAACATTGGCGATGTAGGTGGGCTAGTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCAGTTCTACGGGGACGCATGCGTAGGCCgg                                                                             <  1:2227268/99‑1 (MQ=37)

                         ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGa                                                                            >  1:2426779/1‑100 (MQ=255)

                          tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGAt                                                                           <  1:2674235/100‑1 (MQ=255)

                          tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGAt                                                                           >  1:1216109/1‑100 (MQ=255)

                           gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                                                          >  1:1039550/1‑100 (MQ=255)

                            aaaaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATaa                                                                         <  2:2638141/100‑1 (MQ=255)

                             aaaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAg                                                                        <  2:3002049/100‑1 (MQ=255)

                             aaaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAg                                                                        <  1:1702350/100‑1 (MQ=255)

                              aaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAgg                                                                       <  2:2329851/100‑1 (MQ=255)

                                   tGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGttt                                                                  <  2:1286149/100‑1 (MQ=255)

                                     ccGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAc                                                                <  2:2891835/100‑1 (MQ=255)

                                     ccGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAc                                                                >  1:1990553/1‑100 (MQ=255)

                                       gATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgc                                                              >  2:3442884/1‑100 (MQ=255)

                                        aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                             <  2:885699/100‑1 (MQ=255)

                                        aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                             <  1:3874807/100‑1 (MQ=255)

                                        aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGAGGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                             <  1:3032236/100‑1 (MQ=255)

                                         tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                            <  2:12343/100‑1 (MQ=255)

                                         tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                            <  1:2748532/100‑1 (MQ=255)

                                         tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                            >  2:1593196/1‑100 (MQ=255)

                                             ggTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                        >  2:950784/1‑100 (MQ=255)

                                              gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                       >  1:834993/1‑100 (MQ=255)

                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                     >  1:3818662/1‑100 (MQ=255)

                                                  gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                   >  2:1154913/1‑100 (MQ=255)

                                                  gCTACTGTGCCAAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                    <  2:2117613/99‑1 (MQ=255)

                                                   cTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCAGATAAGGCGTTTACGCCGCATCCGGCaa                                                  >  1:209019/1‑100 (MQ=255)

                                                    tACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAt                                                 <  1:3386219/100‑1 (MQ=255)

                                                    tACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAt                                                 >  2:329542/1‑100 (MQ=255)

                                                      cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATgg                                               <  2:2600770/100‑1 (MQ=255)

                                                      cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATgg                                               >  2:1218285/1‑100 (MQ=255)

                                                      cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTGATCCGGCCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATgg                                               <  1:2620930/100‑1 (MQ=255)

                                                           ccTAAAATGTCGGATGTGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                             <  1:1844712/97‑1 (MQ=255)

                                                            cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                         >  2:2099099/1‑100 (MQ=255)

                                                              aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                       <  2:3497147/100‑1 (MQ=255)

                                                              aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                       >  2:3338498/1‑100 (MQ=255)

                                                              aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                       <  2:3302908/100‑1 (MQ=255)

                                                                aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                     >  2:1295495/1‑100 (MQ=255)

                                                                  ggtcggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                   >  1:331203‑M2/34‑100 (MQ=255)

                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCaa                                  <  1:2260616‑M1/100‑1 (MQ=255)

                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCaa                                  <  2:1491858‑M1/100‑1 (MQ=255)

                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  1:1893587‑M2/30‑100 (MQ=255)

                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  2:2962980‑M2/30‑100 (MQ=255)

                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  2:2372716‑M2/30‑100 (MQ=255)

                                                                      gaATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               <  2:2618559‑M1/98‑1 (MQ=255)

                                                                         TGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtt                            <  2:414440‑M1/100‑1 (MQ=255)

                                                                         TGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTATAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGt                             <  1:1046364‑M1/99‑1 (MQ=255)

                                                                          gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                           <  2:776737/100‑1 (MQ=255)

                                                                          gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                           >  2:826121/1‑100 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          <  1:1719121/100‑1 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          <  1:1456696/100‑1 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttat                          >  2:599281/1‑98 (MQ=255)

                                                                           agacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAAGACGtttt                          <  2:2030225‑M2/76‑1 (MQ=255)

                                                                               gCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATcc                      >  2:1167669/1‑100 (MQ=255)

                                                                                cgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                     >  2:3723617‑M2/20‑100 (MQ=255)

                                                                                    cgcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTGCTGTCCAAATGCAACACGTTTTATCCGTTCt                 <  1:2554958/100‑1 (MQ=255)

                                                                                    cgcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCt                 <  1:1295487/100‑1 (MQ=255)

                                                                                    cgcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCt                 <  1:2213239/100‑1 (MQ=255)

                                                                                     gcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                <  1:54732/100‑1 (MQ=255)

                                                                                      cgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg               <  2:178677/100‑1 (MQ=255)

                                                                                      cgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                <  2:3152037/99‑1 (MQ=255)

                                                                                      cgTCTTATCCGACCTACGGGGACGCATGGGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg               <  1:3306963/100‑1 (MQ=255)

                                                                                       gTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg               >  1:3019948/1‑99 (MQ=255)

                                                                                        tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  2:565895/100‑1 (MQ=255)

                                                                                        tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  2:868176/100‑1 (MQ=255)

                                                                                        tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             >  2:1957345/1‑100 (MQ=255)

                                                                                         cTTATCCGACCTATGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACt            <  1:3576811/100‑1 (MQ=255)

                                                                                         cTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACt            <  1:1404365/100‑1 (MQ=255)

                                                                                            atccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCa         >  1:3451812‑M2/8‑100 (MQ=255)

                                                                                                gacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCg     <  1:2972973‑M2/97‑1 (MQ=255)

                                                                                                 acCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGc    <  1:897393‑M2/98‑1 (MQ=255)

                                                                                                  cCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCt   >  2:2921563‑M2/2‑100 (MQ=255)

                                                                                                  cCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCt   <  1:3334785‑M2/99‑1 (MQ=255)

                                                                                                   cTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTa  <  1:3276843/100‑1 (MQ=255)

TCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTA  >  NC_000913/2835000‑2835198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.