New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3525557NA (NA)14 (0.110) 11/164 NT NA noncoding (80/98 nt) RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3525568 NA (NA)noncoding (91/98 nt) RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 195 total aligned reads displayed.

CTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAGGG  >  NC_000913/3525469‑3525667
                                                                                                   |                                                                                                   
cTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGc                                                                                                     <  1:740688/100‑1 (MQ=255)
cTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGc                                                                                                     >  2:1280023/1‑100 (MQ=255)
cTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGc                                                                                                     <  2:2517475/100‑1 (MQ=255)
     ttATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcag                                                                                                <  1:2682618‑M2/100‑6 (MQ=255)
     ttATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcag                                                                                                >  2:1169357‑M2/1‑95 (MQ=255)
      tATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcagg                                                                                               <  2:2844170‑M2/100‑7 (MQ=255)
       aTGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcaggc                                                                                              >  2:2950521‑M2/1‑93 (MQ=255)
        tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                                                                             >  2:2110796/1‑100 (MQ=255)
        tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                                                                             >  2:2823864/1‑100 (MQ=255)
         gCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCaa                                                                                            >  2:780569/1‑100 (MQ=255)
          ccGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggctta                                                                                           >  2:809394‑M2/1‑90 (MQ=255)
           cGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttat                                                                                          >  1:655882‑M2/1‑89 (MQ=255)
           cGGATACGGCGTGAACGCGTTATCCGGCTAACAAAAGCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAAc                                                                                          <  2:3698011/100‑1 (MQ=255)
            ggATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatg                                                                                         >  2:1229228‑M2/1‑88 (MQ=255)
            ggATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACt                                                                                         <  2:1107927/100‑1 (MQ=255)
             gATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgg                                                                                        >  2:1213431‑M2/1‑87 (MQ=255)
             gATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgg                                                                                        >  2:764170‑M2/1‑87 (MQ=255)
             gATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACtt                                                                                        >  1:2969545/1‑100 (MQ=255)
              aTACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTc                                                                                       <  1:1023828/100‑1 (MQ=255)
               tACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCa                                                                                      >  1:3416560/1‑100 (MQ=255)
               tACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCa                                                                                      <  2:1981737/100‑1 (MQ=255)
                aCGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCAc                                                                                     <  2:164839/100‑1 (MQ=255)
                aCGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCAc                                                                                     >  2:3018600/1‑100 (MQ=255)
                 cGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACg                                                                                    >  2:1454498/1‑100 (MQ=255)
                  ggCGTGAACGCGTTATCCGGCTAACAAAGTCGTGAAAACACAATAAATTGCAGAAACCCCATAAGCCTGATAAACATGGTGCATCAGGCAAACTTCACGc                                                                                   >  1:1627109/1‑100 (MQ=255)
                  ggCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGc                                                                                   >  1:3454540/1‑100 (MQ=255)
                  ggCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGc                                                                                   >  1:3189306/1‑100 (MQ=255)
                  ggCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGACAAACTTCACGc                                                                                   <  1:369843/100‑1 (MQ=255)
                   gCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCCGATAAACATTGTGCATCAGGCAAACTTCACGcn                                                                                  <  1:2328233/100‑2 (MQ=255)
                        aaCGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTac                                                                             <  1:1854264/100‑1 (MQ=255)
                          cgcgTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatggggtttctgcaatt                                                                           >  1:1187738‑M2/1‑74 (MQ=255)
                          cgcgTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTACATCAGGCAAACTTCACGCATTTacac                                                                           >  2:945277/1‑100 (MQ=255)
                           gcgTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACt                                                                          <  2:1389015/100‑1 (MQ=255)
                             gTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCg                                                                        >  1:2431832/1‑100 (MQ=255)
                               tATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcc                                                                      <  2:3149383/100‑1 (MQ=255)
                               tATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcc                                                                      <  2:547779/100‑1 (MQ=255)
                               tATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCAGAAGCCTGATGCACAATGTTTatcaggcttatggggtttctgcaatttattg                                                                      >  1:2202011‑M2/1‑69 (MQ=255)
                                 tCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcccc                                                                    <  2:1763567/100‑1 (MQ=255)
                                 tCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcccc                                                                    <  2:3846080/100‑1 (MQ=255)
                                  ccGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCt                                                                   <  2:3265089/100‑1 (MQ=255)
                                  ccGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCt                                                                   >  2:1262798/1‑100 (MQ=255)
                                   cGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTg                                                                  <  1:3735513/100‑1 (MQ=255)
                                     gCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACTCCATAAGCCTGATAAACATAGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGcc                                                                <  1:2110781/100‑1 (MQ=255)
                                     gCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGcc                                                                <  1:3620388/100‑1 (MQ=255)
                                       tacccaaaTCGTGAACAATCAATAAATTCCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGTCAAACTTCACGCATTTACACTCGCCCCTGccc                                                               >  1:2654104/6‑99 (MQ=255)
                                         aCAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCttt                                                            <  2:3027296/100‑1 (MQ=255)
                                          cAAGATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATGGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTc                                                           <  1:1781798/100‑1 (MQ=255)
                                          cAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTc                                                           >  2:941634/1‑100 (MQ=255)
                                           aaaaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCa                                                          <  1:1416832/100‑1 (MQ=255)
                                           aaaaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGCCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCa                                                          <  1:2063293/100‑1 (MQ=255)
                                            aaaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCaa                                                         <  2:338234/100‑1 (MQ=255)
                                             aaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACNTTGTNCATCAAGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCaan                                                        <  2:1885573/100‑2 (MQ=255)
                                             aaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCTCTGCCCTTTCAAc                                                        <  2:2604366/100‑1 (MQ=255)
                                             aaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAc                                                        >  1:1905288/1‑100 (MQ=255)
                                              aTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAcc                                                       <  1:1312137/100‑1 (MQ=255)
                                              aTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAcc                                                       <  2:1396469/100‑1 (MQ=255)
                                                cGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCAt                                                     >  2:2711900/1‑100 (MQ=255)
                                                cGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCAt                                                     <  2:195402/100‑1 (MQ=255)
                                                 gTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCAtt                                                    >  1:1092380/1‑100 (MQ=255)
                                                    aaaaCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTCCCCTTTCAACCATTcgc                                                 >  1:3075147/1‑100 (MQ=255)
                                                     aaccTCAATAAATTGCAGAAACCTCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCTCTGCCCTTTCAACCATTcg                                                  <  1:461118/95‑1 (MQ=255)
                                                     aaaCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTcgcg                                                <  1:212064/100‑1 (MQ=255)
                                                     aaaCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTcgcg                                                >  2:2925926/1‑100 (MQ=255)
                                                     aaaCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTcg                                                  <  2:1341293/98‑1 (MQ=255)
                                                       aCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCa                                              <  1:1664908/100‑1 (MQ=255)
                                                        cTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCAc                                             <  2:16971/100‑1 (MQ=255)
                                                         tCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACg                                            >  2:736307/1‑100 (MQ=255)
                                                           aaTAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAg                                          <  1:3546757/100‑1 (MQ=255)
                                                           aaTAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAg                                          <  2:458848/100‑1 (MQ=255)
                                                           aaTAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAg                                          <  2:2154068/100‑1 (MQ=255)
                                                             tAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGa                                        <  1:1819457/100‑1 (MQ=255)
                                                              aaaTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCATGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGaa                                       >  1:2874977/1‑100 (MQ=255)
                                                              aaaTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGaa                                       >  2:3534548/1‑100 (MQ=255)
                                                                    cAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcgc                                 <  2:587053/100‑1 (MQ=255)
                                                                         aCCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCCCGCACGAGGAACACCGCACTGa                            >  1:3528378/1‑100 (MQ=255)
                                                                          ccccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGAc                           <  2:1575116/100‑1 (MQ=255)
                                                                           cccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACa                          <  1:920873/100‑1 (MQ=255)
                                                                            ccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACAt                         >  1:1127547/1‑100 (MQ=255)
                                                                             cATAAGCCTGATAAACATTGTGCatcaggcttatggggtttatgcaatttattgagttttcacgattttgttagccggataacgcgttcacgccgtatcc                        <  1:2122741‑M2/100‑78 (MQ=255)
                                                                              aTAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTg                       <  1:1016780/100‑1 (MQ=255)
                                                                              aTAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTg                       <  1:2558362/100‑1 (MQ=255)
                                                                                 aGCCTGATAAACATTGTGCatcaggcttatggggtttctgcaatttattgagttttcacgattttgttagccggataacgcgttcacgccgtatccggca                    <  2:1065493‑M2/100‑82 (MQ=255)
                                                                                  gCCTGATAAACATTGTGCatcaggcttatggggtttctgcaatttattgagttttcacgattttgttagccggataacgcgttcacgccgtatccggcat                   <  1:854343‑M2/100‑83 (MQ=255)
                                                                                  gCCTGATAAACATTGTGCatcaggcttatggggtttctgcaatttattgagttttcacgattttgttagccggataacgcgttcacgccgtatccggcat                   <  1:425904‑M2/100‑83 (MQ=255)
                                                                                  gCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgcg                   <  2:2420660/100‑1 (MQ=255)
                                                                                   ccTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgcgc                  <  2:915334/100‑1 (MQ=255)
                                                                                   ccTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgcgc                  <  2:1434392/100‑1 (MQ=255)
                                                                                   ccTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgcgc                  <  1:2167793/100‑1 (MQ=255)
                                                                                    cTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCt                 <  1:565740/100‑1 (MQ=255)
                                                                                      gATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTc               >  2:234029/1‑100 (MQ=255)
                                                                                      gATAAACATTGGGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTCCAACCATTCGCGCACGAGGAACAGCGCACTGACAGTGCGCGCGTc               <  1:1817532/100‑1 (MQ=255)
                                                                                       aTAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCa              <  2:3588279/100‑1 (MQ=255)
                                                                                          aaCATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTg           <  1:793862/100‑1 (MQ=255)
                                                                                           aCATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGa          <  2:1127555/100‑1 (MQ=255)
                                                                                           aCATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGa          <  1:1566759/100‑1 (MQ=255)
                                                                                                  gCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAgg   >  1:172004/1‑100 (MQ=255)
                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg  <  2:349228/100‑1 (MQ=255)
                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg  >  1:192527/1‑100 (MQ=255)
                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg  <  1:1550137/100‑1 (MQ=255)
                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg  <  1:1777220/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAGGG  >  NC_000913/3525469‑3525667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.