New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4606620 =153 (1.090)7 (0.050) 6/164 NT 5.0% noncoding (63/92 nt) REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4606650 = 126 (0.980)intergenic (‑249/+19) leuQ/rsmC tRNA‑Leu/16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
Rejected: Frequency below cutoff threshold.

Only 100 of 180 total aligned reads displayed.

GGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGTGGAAG  >  NC_000913/4606551‑4606747
                                                                                                   |                                                                                                 
gcttcaaggtgtatcgcgccattatgacccgccaggcgaagaaaggttaattatctcgccgaataccgtGTCGGATAAGGCGTTCACGCCGCATCCGaca                                                                                                   >  1:3616213‑M1/70‑100 (MQ=255)
 gCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGacac                                                                                                  <  2:1974707/100‑1 (MQ=255)
 cttcaaggtgtatcgcggcattatgaccctataggcgaagaaacgttaattatctcgccgaataccgtGTCGGATAAGGCGTTCACGCCGCATCCGacac                                                                                                  >  1:1837754‑M1/69‑100 (MQ=255)
 cttcaaggtgtatcgcgccattatgacccgccaggcgaagaaaggttaattatctcgccgaataccgtGTCGGATAAGGCGTTCACGCCGCATCCGacac                                                                                                  >  1:2772994‑M1/69‑100 (MQ=255)
  cagatgccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACg                                                                                                 >  2:1285003/1‑100 (MQ=255)
   tcaaggtgtatcgcgccattatgacccgccaggcgaagaaaggttaattatctcgccgaataccgtGTCGGATAAGGCGTTCACGCCGCATCCGACACgg                                                                                                >  1:2801358‑M1/67‑100 (MQ=255)
   agatgccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACgg                                                                                                <  2:1806590/100‑1 (MQ=255)
    gatgccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGt                                                                                               >  1:1638143/1‑100 (MQ=255)
     atgccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACgg                                                                                                >  2:3397380/1‑98 (MQ=255)
       gccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTAtt                                                                                            >  2:1724207/1‑100 (MQ=255)
         cagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCg                                                                                          >  2:2197146/1‑100 (MQ=255)
             tgcGACGCTGGCGCGTCTTATCTGGCTTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCga                                                                                      <  1:3424223/100‑1 (MQ=255)
             tgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCga                                                                                      <  2:3361339/100‑1 (MQ=255)
             tgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCga                                                                                      <  2:669647/100‑1 (MQ=255)
              gcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCgag                                                                                     <  1:2913552/100‑1 (MQ=255)
              gcGACGCGGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCgag                                                                                     <  1:1162820/100‑1 (MQ=255)
               cGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCgaga                                                                                    >  2:3440276/1‑100 (MQ=255)
                 aCGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATa                                                                                  <  2:2984965/100‑1 (MQ=255)
                  cGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATaa                                                                                 <  1:986338/100‑1 (MQ=255)
                  cGCTGGCGCGTCTTATCTGGCATACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATaa                                                                                 >  1:381878/1‑100 (MQ=255)
                     tGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTa                                                                              <  2:61493/100‑1 (MQ=255)
                       gcgcGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAc                                                                            <  2:2883225/100‑1 (MQ=255)
                        cgcgTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAcc                                                                           <  2:1968969/100‑1 (MQ=255)
                        cgcgTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAcc                                                                           <  1:668276/100‑1 (MQ=255)
                        cgcgTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAcc                                                                           >  1:3182192/1‑100 (MQ=255)
                        cgcgTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAcc                                                                           <  2:1899750/100‑1 (MQ=255)
                           gTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGATTTGTAGGTCGGATAAGGCGTACAAGCCGCATCCGACACGGTATTCGGCGAGATAATTAATCt                                                                          >  1:1912551/1‑98 (MQ=38)
                            tCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTttc                                                                       <  2:1389219/100‑1 (MQ=255)
                            tCTTATCTGGCCTAAGAAGGGCTAACGTGCAGGTTTTGTAGGTCGAATACGACGTTAACGGCGCATCCGACACGGTAATCGGCGAGATACTTAAACttt                                                                        >  1:3277092/1‑99 (MQ=25)
                             cTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTttct                                                                      >  2:1511524/1‑100 (MQ=255)
                               tATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTttcttc                                                                    <  1:181128/100‑1 (MQ=255)
                                aTCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCg                                                                   >  1:2186559/1‑100 (MQ=255)
                                aTCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCg                                                                   <  2:2020472/100‑1 (MQ=255)
                                  cTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGcc                                                                 <  2:2269710/100‑1 (MQ=255)
                                   tGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCt                                                                <  1:2858422/100‑1 (MQ=255)
                                    ggCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTg                                                               >  2:2403506/1‑100 (MQ=255)
                                    ggCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTg                                                               >  2:110671/1‑100 (MQ=255)
                                    ggCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTg                                                               >  2:2904100/1‑100 (MQ=255)
                                      ccTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGc                                                             <  1:1511515/100‑1 (MQ=255)
                                      ccTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGc                                                             >  1:4206/1‑100 (MQ=255)
                                      ccTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGc                                                             <  1:1366998/100‑1 (MQ=255)
                                       cTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCg                                                            <  2:3053363/100‑1 (MQ=255)
                                       cTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCg                                                            <  2:3180675/100‑1 (MQ=255)
                                          cGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGt                                                         >  2:2172380/1‑100 (MQ=255)
                                          cGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATGAACCTTTCTTCGCCTGGCggg                                                          >  1:935861/1‑99 (MQ=255)
                                           gAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTc                                                        <  1:1026538/100‑1 (MQ=255)
                                             aGGGCTAACGTGCAGGTTTTGTAGGGCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCa                                                       <  1:2163185/99‑1 (MQ=255)
                                               ggCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATaa                                                    >  1:645633/1‑100 (MQ=255)
                                                  tAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATgg                                                 >  2:3870367/1‑100 (MQ=255)
                                                  tAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATgg                                                 >  2:2596031/1‑100 (MQ=255)
                                                   aaCGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGgc                                                >  1:477116/1‑100 (MQ=255)
                                                       tGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGa                                            <  1:1227961/100‑1 (MQ=255)
                                                       tGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGa                                            <  2:161400/100‑1 (MQ=255)
                                                       tGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGa                                            <  2:2500328/100‑1 (MQ=255)
                                                          aGGTTTTGTAGGTCGGATAAGGCGTTCACGCTGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATGATGGCGCGATac                                         >  1:1987305/1‑100 (MQ=255)
                                                          aGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATac                                         <  1:2951498/100‑1 (MQ=255)
                                                          aGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATac                                         <  1:1439194/100‑1 (MQ=255)
                                                           cgaataccgtgtcggatgcggcgtgaacgccttatccgacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATaca                                        >  2:1908786‑M2/41‑100 (MQ=255)
                                                             ttttGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACAcc                                      <  2:354148/100‑1 (MQ=255)
                                                              ataccgtgtcggatgcggcgtgaacgccttatccgacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCt                                     >  2:2439021‑M2/38‑100 (MQ=255)
                                                                tGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTg                                   >  2:329011/1‑100 (MQ=255)
                                                                tGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATGCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTg                                   <  1:2383832/100‑1 (MQ=255)
                                                                  tAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGaa                                 <  2:1327475/100‑1 (MQ=255)
                                                                  cgtgtcggatgcggcgtgaacgccttatccgacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGaa                                 >  1:579673‑M2/34‑100 (MQ=255)
                                                                   gtGTCGGATGCGGCGTGAACGCCTTATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGaa                                 <  1:1837974‑M1/97‑1 (MQ=255)
                                                                   aGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAg                                <  2:1648793/100‑1 (MQ=255)
                                                                    ggTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAgc                               >  2:3166211/1‑100 (MQ=255)
                                                                    ggTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAgc                               >  1:3620712/1‑100 (MQ=255)
                                                                     gTCGGATAAGGCGTTCACGCCGCTTCCGACACGGGATTGGACGTGATAAGTAAATTTTCTTCGCCTGGCGGGGCCTCGTGGCGCGGTACACCTTGTAgc                               >  1:1051209/1‑99 (MQ=16)
                                                                     GTCGGAGAAGGCGTTCACGCCGCGTCCGGCACGGTATTCGGCGAGATAATTAACCTGTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTGGAAgcg                              >  1:2705353‑M1/1‑100 (MQ=255)
                                                                       CGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGcc                            <  1:3249527‑M1/100‑1 (MQ=255)
                                                                       CGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGcc                            >  2:3791285‑M1/1‑100 (MQ=255)
                                                                         GATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCt                          <  1:3657373‑M1/100‑1 (MQ=255)
                                                                           TAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGt                        <  2:1159211‑M1/100‑1 (MQ=255)
                                                                             aGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGttt                      >  1:2946985/1‑100 (MQ=255)
                                                                              ggCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTg                     <  2:1704310/100‑1 (MQ=255)
                                                                              ggCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTg                     <  2:1129796/100‑1 (MQ=255)
                                                                                cGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTgcg                   >  1:2915728/1‑100 (MQ=255)
                                                                                cGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTgcg                   >  2:1783723/1‑100 (MQ=255)
                                                                                 gTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTgcgc                  <  2:2089061/100‑1 (MQ=255)
                                                                                  ttCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGcgcg                 <  2:400032/100‑1 (MQ=255)
                                                                                  tgaaCGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGcgcg                 >  1:1478955/4‑100 (MQ=255)
                                                                                    cACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGAt               >  2:3223553/1‑100 (MQ=255)
                                                                                     aCGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATc              <  1:331457/100‑1 (MQ=255)
                                                                                      cgccgcATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCa             <  1:3795203/100‑1 (MQ=255)
                                                                                      cgccgcATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCa             >  1:250999/1‑100 (MQ=255)
                                                                                        ccgcATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACt           >  1:3169055/1‑100 (MQ=255)
                                                                                        ccgcATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACt           >  2:2560244/1‑100 (MQ=255)
                                                                                           cATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCg        <  2:2746544/100‑1 (MQ=255)
                                                                                            atccgacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGt       <  2:2948906‑M2/93‑1 (MQ=255)
                                                                                            atccgacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGt       >  1:525155‑M2/8‑100 (MQ=255)
                                                                                            atccgacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGt       <  2:3654469‑M2/93‑1 (MQ=255)
                                                                                             tccgacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGTg      <  2:3061174‑M2/94‑1 (MQ=255)
                                                                                             tccgacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGTg      <  1:2734952‑M2/94‑1 (MQ=255)
                                                                                             tccgacACGGTATTCGGCGAGAAAATTAACCTGTCTTCGTCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGTg      <  1:2723368‑M2/94‑1 (MQ=255)
                                                                                               cgacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGTGGa    >  1:3327754‑M2/5‑100 (MQ=255)
                                                                                               cgacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGTGGa    >  2:446762‑M2/5‑100 (MQ=255)
                                                                                                gacGCGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGTg      <  1:3056231‑M2/94‑1 (MQ=255)
                                                                                                gacACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGTGGaa   >  1:1201160‑M2/4‑100 (MQ=255)
                                                                                                 acACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGTGGAAg  <  2:3474174‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                 
GGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCGATCACTTCGTGGAAG  >  NC_000913/4606551‑4606747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.