| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 595,520 | T→A | 19.0% | intergenic (‑77/‑80) | cusR ← / → cusC | response regulator in two‑component regulatory system with CusS/copper/silver efflux system, outer membrane component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 595,520 | 0 | T | A | 19.0% | 344.9 / 67.2 | 150 | intergenic (‑77/‑80) | cusR/cusC | response regulator in two‑component regulatory system with CusS/copper/silver efflux system, outer membrane component |
| Reads supporting (aligned to +/- strand): ref base T (54/66); new base A (19/10); total (74/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.23e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
TCTTCGACAATCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTCCTTGTAAAC > NC_000913/595421‑595615 | tCTTCGACAATCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAAtt > 1:2043923/1‑100 (MQ=255) cTTCGACAATCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAAttt > 1:626385/1‑100 (MQ=255) cTTCGACAATCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAAttt > 1:1240755/1‑100 (MQ=255) cTTCGACAATAAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAAttt > 2:269281/1‑100 (MQ=255) cggcAATCAACCGGTTCAGATTTCCTTCGCAGGTTGGCCGGGGCATTTTTGGGGAGGGGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAAttt < 1:2462466/95‑1 (MQ=255) cGACAATCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGt < 2:2506341/100‑1 (MQ=255) aCAATCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCa < 2:3391321/100‑1 (MQ=255) aCAATCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAAAATTGTCa < 1:379828/100‑1 (MQ=255) aaTCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCAtt > 2:2127949/1‑100 (MQ=255) aTCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGTCAAAATGACAATTTTGTCAtt > 1:942304/1‑99 (MQ=255) aTCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCAttt > 1:2758308/1‑100 (MQ=255) aTCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCAttt > 1:1564236/1‑100 (MQ=255) aTCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAAAATTGTCAttt > 2:3741710/1‑100 (MQ=255) tCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAAAATTGTCAtttt < 1:2757229/100‑1 (MQ=255) aaCAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTc > 2:3786380/1‑100 (MQ=255) aaCAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTc > 2:729237/1‑100 (MQ=255) aCAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCt > 2:1359486/1‑100 (MQ=255) aCAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCt > 2:3212446/1‑100 (MQ=255) cAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTg < 1:3152600/100‑1 (MQ=255) cAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTg < 1:58966/100‑1 (MQ=255) cAGTTTCAAATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGTATCAGATGGCAATCGCTTATTGGCAAAATGTCAAAATTGTCAttttgcca < 1:3544261/100‑5 (MQ=255) aGTTTCATATTTCCTCCGCATGTT‑GCCCGTGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTg < 1:1689267/99‑1 (MQ=255) aGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGt < 2:487953/100‑1 (MQ=255) gTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTc > 2:1989221/1‑100 (MQ=255) tttCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCa > 2:1329087/1‑100 (MQ=255) ttCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCAc < 1:1454436/100‑1 (MQ=255) tCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAAAATTGTCAttttgccaataag < 1:2073831/100‑10 (MQ=38) atatTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCgg > 2:60441/1‑100 (MQ=255) atatTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCgg > 1:888651/1‑100 (MQ=255) atatTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTAATTTTTCTGTCACCg > 1:3267961/1‑99 (MQ=255) tttCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGaaa > 1:362437/1‑100 (MQ=255) attCATCTGCACGTT‑GCCCGGGCAATTCAAAAATAGCGGGATCAGATGGCAGTCAATTATTAGAAAAATGACAATGTTGTCGTTTTACTgaaac > 1:2309718/2‑90 (MQ=255) ttCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGaaaa < 1:3085135/100‑1 (MQ=255) ttCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGaaaa < 2:2997193/100‑1 (MQ=255) ctccGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCa < 2:2768733/100‑1 (MQ=255) ctccGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAAGCa < 1:664789/100‑1 (MQ=255) tccGCATGTT‑GTCCGGGCAATTCTAGAGTAGTTTTATCAGATGGCAATCGCTTATTGGAAAAATGACAATTTTGTCATTTTTCTTTCACCGGAAAATCa < 1:1229646/99‑1 (MQ=255) ccGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCaga > 2:789645/1‑100 (MQ=255) cGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCagag < 2:75110/100‑1 (MQ=255) gCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGc > 2:3258531/1‑100 (MQ=255) tt‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGc < 1:2406796/100‑1 (MQ=255) t‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCg > 2:101764/1‑100 (MQ=255) ccGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGt < 2:3480724/100‑1 (MQ=255) ccGGGCAATTCTAAAGTAGCGGGATCAGATGGCCATCACTTATTGGAAAAATGAAAATATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAg > 1:3860316/1‑99 (MQ=255) cGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTa > 2:3439059/1‑100 (MQ=255) gggCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGCAAAATCAGAGCCTGGCGAGTaa < 1:1908708/100‑1 (MQ=255) gCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAg < 1:3786348/100‑1 (MQ=255) ttCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGt < 1:1418898/97‑1 (MQ=255) tCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTggc < 1:1007915/100‑1 (MQ=255) cTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTggcg > 2:3879471/1‑100 (MQ=255) agagTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTggcggc < 2:1918874/100‑1 (MQ=255) tAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATaa < 2:3300784/100‑1 (MQ=255) aGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATaaa > 1:867267/1‑100 (MQ=255) gCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATaaaa < 1:3342737/100‑1 (MQ=255) ggATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCa < 2:3669421/100‑1 (MQ=255) aTCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCAcc < 2:1411939/100‑1 (MQ=255) tCAGGTGGCAATCGCTTATTTGCAAAATGACAAGTTTGTCATTTTTCTGTCACCGGAAAATCAGAGTCTGGCGAGTAAAGTTGGCGGCATAAAATCAcc < 1:920052/99‑1 (MQ=255) tCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGGCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCa < 1:1583141/100‑1 (MQ=255) cAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAg > 1:1163469/1‑100 (MQ=255) cAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAg > 1:2738790/1‑100 (MQ=255) agctGGCACTCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGCCGAGTAAAGTTTACGGCCTAAAATCACCa > 1:752612/4‑98 (MQ=255) gATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGCGTAAAGTTGGCGGCATAAAATCACCAGaa > 1:2607587/1‑100 (MQ=255) gATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGaa > 1:1042382/1‑100 (MQ=255) gATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGaa > 1:2011732/1‑100 (MQ=255) gATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGaa > 1:2876750/1‑100 (MQ=255) tGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAAt < 2:3056676/100‑1 (MQ=255) gCAATCGCTTATTGGCAAAATGACAATTTTGTGATTTTTATGGCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTa < 1:2724724/100‑1 (MQ=255) gCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAACGTTGGCGGCATAAAATCACCAGAAATTa > 1:456221/1‑100 (MQ=255) gCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTa < 2:2841220/100‑1 (MQ=255) cAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTAt < 2:1908607/100‑1 (MQ=255) tCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATg < 1:1158156/98‑1 (MQ=255) nacagaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATg > 1:3702549/7‑100 (MQ=38) aTTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATg < 2:948134/100‑1 (MQ=255) ttGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGt > 1:678727/1‑100 (MQ=255) cagaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtc > 2:2666789/5‑100 (MQ=39) cagaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtc > 1:3366515/5‑100 (MQ=39) cagaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtc > 1:439755/5‑100 (MQ=39) cagaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtc > 2:3659892/5‑100 (MQ=39) cagaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtc > 2:263094/5‑100 (MQ=39) cagaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTCGCGGCATAAAATCACCAGAAATTATGAGCCTATGtc > 1:859085/5‑100 (MQ=39) ggCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtct > 1:2897760/1‑100 (MQ=255) ggCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtc > 1:2292796/1‑99 (MQ=255) gtaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtctc > 2:2624885/3‑100 (MQ=255) gaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAACTCAGAGCCTGGCGAGTAAAGTTAGCGGCATAAAAACACCAGAAATAATAAGCCTATGtct > 1:446620/3‑99 (MQ=255) gaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtctc > 2:1706348/3‑100 (MQ=255) gaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtctc > 2:2673006/3‑100 (MQ=255) gaaaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGAATAAAATCCCCAGAAATTATGAGCCTATGtct > 1:1308789/3‑99 (MQ=255) gCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGtctc > 2:3442975/1‑100 (MQ=255) cAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTcc > 1:742739/1‑100 (MQ=255) cAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTcc > 2:5341/1‑100 (MQ=255) cAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTcc < 1:1784161/100‑1 (MQ=255) cAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTcc < 2:2340729/100‑1 (MQ=255) aaaaTGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTCCt < 2:1871145/100‑1 (MQ=255) aaaaTGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTCCt < 2:888659/100‑1 (MQ=255) aaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTCCt > 2:2364344/1‑100 (MQ=255) aaaaTGACAAAATTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTCCt > 2:2247499/1‑100 (MQ=255) aaTGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTCCTTg < 2:3781303/100‑1 (MQ=255) aaTGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTCCTTg < 1:1658827/100‑1 (MQ=255) aTGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTCCTTg < 2:466128/99‑1 (MQ=255) gACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTCCTTGTaa > 1:1821868/1‑100 (MQ=255) | TCTTCGACAATCAACAGTTTCATATTTCCTCCGCATGTT‑GCCCGGGCAATTCTAGAGTAGCGGGATCAGATGGCAATCGCTTATTGGCAAAATGACAATTTTGTCATTTTTCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGGCATAAAATCACCAGAAATTATGAGCCTATGTCTCCTTGTAAAC > NC_000913/595421‑595615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |