| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,449,624 | Δ1 bp | 16.4% | coding (426/822 nt) | yfcO ← | DUF2544 family putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,449,624 | 0 | C | . | 16.4% | 467.9 / 94.4 | 159 | coding (426/822 nt) | yfcO | DUF2544 family putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (63/68); new base . (11/15); total (75/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 | |||||||||||
Only 100 of 161 total aligned reads displayed.
GTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCAAATGTA > NC_000913/2449527‑2449723 | gTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGt > 1:3314752/1‑100 (MQ=255) tttGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGGGCCTGATA‑GTCAc < 2:1429766/100‑1 (MQ=255) tttGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCa < 1:2618124/100‑1 (MQ=255) tttGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCa > 1:228442/1‑100 (MQ=255) ttGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCAc < 2:3041774/100‑1 (MQ=38) ttGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCAc < 1:1471788/100‑1 (MQ=38) tGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCAcn < 1:665379/100‑2 (MQ=255) gACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGc < 2:57556/100‑1 (MQ=255) aCTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGcc < 2:2397654/100‑1 (MQ=255) cTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgaca < 2:3318211/100‑4 (MQ=37) cTTACAGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgac < 2:1021045/99‑3 (MQ=37) ttACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgacac < 1:1694482/100‑5 (MQ=37) ttACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgacac < 2:2531751/100‑5 (MQ=25) ttACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgacac < 1:2845276/100‑5 (MQ=37) tACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgacacg < 1:1217625/100‑6 (MQ=25) tACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGccccc > 1:3304952/1‑100 (MQ=255) aCTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCt < 2:907322/100‑1 (MQ=255) tGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTgg > 2:1352595/1‑100 (MQ=255) gACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTg > 1:730077/1‑98 (MQ=255) aCATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGgag < 2:1019514/100‑1 (MQ=255) cATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGgaga < 1:3492287/100‑1 (MQ=255) cATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGgaga < 1:2207826/100‑1 (MQ=255) tAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAgg < 2:1476038/100‑1 (MQ=255) aaTTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGc < 2:3475301/100‑1 (MQ=255) ttCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCtt > 2:234367/1‑100 (MQ=255) aaccATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTc > 2:593830/4‑100 (MQ=255) ctcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCa < 2:716583/100‑1 (MQ=255) ctcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCa < 1:3252671/100‑1 (MQ=255) cATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCaga < 1:115272/100‑1 (MQ=255) aTTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCagag > 2:3050646/1‑100 (MQ=255) tCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCagagac > 2:3004592/1‑98 (MQ=255) cATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTAGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTCCAGAGtcat > 1:58633/1‑100 (MQ=255) tGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGtcattc > 2:3264835/1‑100 (MQ=255) tGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGgcatt > 2:1095075/1‑99 (MQ=255) aaCGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCata < 2:2816205/100‑1 (MQ=255) aCGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCataa < 1:3701817/100‑1 (MQ=255) gTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCataata > 1:2966718/1‑100 (MQ=255) cATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATaac < 2:3370286/100‑1 (MQ=255) ggTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATaaccaacc > 1:883221/1‑100 (MQ=255) gTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAaccaacca > 2:1099157/1‑100 (MQ=255) gaagcgataCGGCTGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATgg < 1:2315666/92‑1 (MQ=255) gAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATgg < 2:1490591/100‑1 (MQ=255) cAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACa < 2:3376721/100‑1 (MQ=255) cAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACa > 1:2789485/1‑100 (MQ=255) aGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCAT‑ATAACCAACCATGGACAAg < 1:1289675/100‑1 (MQ=255) gAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAg > 2:712819/1‑100 (MQ=255) ggATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAg < 2:2789499/100‑1 (MQ=255) ggATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAg < 2:1229841/100‑1 (MQ=255) aTGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTa < 1:1176120/100‑1 (MQ=255) ggACAAATCGTGTCGTGTC‑TATCAGTCCCCTGATACGTCACGCCGCCTGGAGAGGCTTCAGAGTCATTCATAATCACCAACCATGGACAAGAAAAGTAAg > 1:306381/1‑100 (MQ=255) ggACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAg > 2:648088/1‑100 (MQ=255) gACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGa < 1:2268855/100‑1 (MQ=255) gACAAATAGTGTCGTGAC‑TATCAGGACCCTGATACGTGACGACGACTGGAGAGGCTTCAGACTCGTAAATAATAACCCACCATGGAAAAGAAAAGTAAGa > 1:1496347/1‑100 (MQ=255) cAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGAtt > 1:1335776/1‑100 (MQ=255) aaaTCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTc > 2:458651/1‑100 (MQ=255) ccagggggcgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTc < 2:2192584/91‑1 (MQ=255) aaTCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCa > 2:1781732/1‑100 (MQ=255) agggggcgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAAt > 2:2298457/7‑100 (MQ=255) ggggcgtgAC‑TATCAGGCCCCTGCTACGTCACGCCGCCTGGAGAGGCTTCAGAGTCCTTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAAtct > 1:1805654/5‑100 (MQ=255) tgtcgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAAtctc < 1:2574240/100‑1 (MQ=255) ggcgtgACGTATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATctct > 1:3564248/3‑100 (MQ=37) tcgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTg < 2:131418/100‑1 (MQ=255) tcgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTg > 1:48854/1‑100 (MQ=255) cgtgACGTATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGCGGCTTCAGAGTCATTCCTAATAACCAACCATGGCCAAGAAAAGTAAGATTCAATCTCTGc > 2:3232180/1‑100 (MQ=25) cgtgACGTATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc > 2:1903634/1‑100 (MQ=38) cgtgACGTATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc > 1:3770351/1‑100 (MQ=38) cgtgACGTATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc > 1:2640570/1‑100 (MQ=38) cgtgACGTATCAGGGGCCTGATA‑GTCACG‑CCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa > 1:2813415/1‑100 (MQ=37) cgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc > 2:2181759/1‑100 (MQ=255) cgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc < 2:1805565/100‑1 (MQ=255) cgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc < 1:2202521/100‑1 (MQ=255) gtgacgtATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa > 2:2104528/7‑100 (MQ=38) gtgacgtATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa > 2:267843/7‑100 (MQ=38) gtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa > 2:2409446/1‑100 (MQ=255) gtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa > 2:657653/1‑100 (MQ=255) gtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa < 1:1058323/100‑1 (MQ=255) tgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCag > 2:3723930/1‑100 (MQ=255) tgAC‑TAGCAGGCCCCGGATACGGAAGGCCCAGTGGAGCAGCTTGAAAGGCATTCATAATAACCAACCAGGGACAAGAAAAGTAAGATTCAAtcgc < 1:3216361/95‑3 (MQ=255) gacgtATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCaga > 2:1892230/5‑100 (MQ=38) gAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGACTCAATCTCTGCaga > 1:2593160/1‑100 (MQ=255) aC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAAAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCagag < 1:2635242/100‑1 (MQ=255) c‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAgaga > 2:3547205/1‑100 (MQ=255) c‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAgaga < 2:476553/100‑1 (MQ=255) tATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGAc < 2:3124618/100‑1 (MQ=255) tATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGAc < 1:3154842/100‑1 (MQ=255) aTCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACa < 2:1375230/100‑1 (MQ=255) cAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAAt > 2:671568/1‑100 (MQ=255) ggCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATaa > 2:1980365/1‑100 (MQ=255) ggCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATaa > 2:380718/1‑100 (MQ=255) gCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAAc > 2:3593209/1‑100 (MQ=255) gCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAAc < 2:3302409/100‑1 (MQ=255) ccccTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAAcc < 1:835084/100‑1 (MQ=255) ccccTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAAcc < 2:1550815/100‑1 (MQ=255) ccccTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCACTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAAcc < 1:3354599/100‑1 (MQ=255) cccTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAAcc < 1:3357422/99‑1 (MQ=255) cccTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCt < 1:3683294/100‑1 (MQ=255) ccTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTc > 2:3713178/1‑100 (MQ=255) aTACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCACCCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCAAAt < 2:3654594/100‑1 (MQ=255) aTACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCAAAt < 2:2593173/100‑1 (MQ=255) cGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCAAATGta > 2:1116953/1‑100 (MQ=255) | GTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCAAATGTA > NC_000913/2449527‑2449723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |