| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 922,316:1 | +C | 15.8% | intergenic (+23/+50) | macB → / ← cspD | macrolide ABC transporter peremase/ATPase/inhibitor of DNA replication, cold shock protein homolog |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 922,314 | 1 | . | C | 15.8% | 480.4 / 90.9 | 139 | intergenic (+21/+52) | macB/cspD | macrolide ABC transporter peremase/ATPase/inhibitor of DNA replication, cold shock protein homolog |
| Reads supporting (aligned to +/- strand): ref base . (55/62); new base C (7/14); total (62/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 148 total aligned reads displayed.
CACCGGGATTTTATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAACACTGGCGTG > NC_000913/922215‑922413 | cACCGGGATTTTATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑g > 1:2799551/1‑100 (MQ=255)cACCGGGATTTTATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑g > 2:162451/1‑100 (MQ=255) ccGGGATTTTATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑cc > 2:1506186/1‑100 (MQ=255) cGGGATTTTATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCg > 2:1249507/1‑100 (MQ=255) gATTTTATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATc < 2:2647691/100‑1 (MQ=255) aTTTTATTTGGCTTGTTACCCGCACGAAATGCGGCACGAATGGATCCAGTAGATGCCCTGGCACGAGAGTAATTTTTGAGATAAAAATGCTA‑G‑CCg > 1:2349206/1‑96 (MQ=255) aTTTTATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCg > 2:2430405/1‑100 (MQ=255) ttttATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCgg > 1:1215245/1‑100 (MQ=255) atttATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCgg < 1:2857134/99‑1 (MQ=255) tttGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑GCCCGATCggctgg < 1:1811852/100‑5 (MQ=255) tttGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTgg < 1:1689092/100‑1 (MQ=255) ttGGCCGGTTGGGCGCACGAGATGGGGCACTAGGGGATGCGGTAGATGCTCTGGCACGAGAGTAATTTCTGGGATAAAAGTGCCATC‑CCGATCggct < 1:1691463/97‑3 (MQ=255) ggctggctACCCGCACGCAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCa < 1:2479981/99‑1 (MQ=255) ggCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑GCCCGATC‑GGCTGGCAt < 2:1107407/100‑1 (MQ=39) ggCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑GCCCGATC‑GGCTGGCAt < 2:3291203/100‑1 (MQ=39) ggCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑GCCCGATC‑GGCTGGCAt < 1:2216487/100‑1 (MQ=39) ggCTGATTACTCTCACGAAATGCGGCACGACTGGATTCAGTAGGTCATCTTGCACGAGAGTAAGTTTCTAGATAAAAATCACA‑C‑CCGATCGGGCTGGCa < 1:366145/99‑1 (MQ=255) gCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑GCCCGATC‑GGCTGGCAtt < 1:764133/100‑1 (MQ=39) gCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑GCCCGATC‑GGCTGGCAtt < 2:2261184/100‑1 (MQ=39) cTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCAttt > 2:3376863/1‑100 (MQ=255) cTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCAttt < 1:2140636/100‑1 (MQ=255) tGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTTGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑GCCCGATC‑GGCTGGCAtttt < 1:619610/100‑1 (MQ=38) tGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCAtttt > 1:3377370/1‑100 (MQ=255) ggTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTg > 2:2242365/1‑100 (MQ=255) ggTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTg > 1:1164921/1‑100 (MQ=255) ggTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGGAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCAtttt > 1:1649222/1‑99 (MQ=255) gTTACCCGCACGAAATGCGGCACGACTGGATTGAGTAGATGCGCTGGCACGAGAGTAAGTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTg < 1:2637913/99‑1 (MQ=255) gTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGc < 2:1776357/100‑1 (MQ=255) ttACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑GTCCGATC‑GGCTGGCAtttttat < 1:1852613/100‑4 (MQ=38) ttACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGcc < 2:2444300/100‑1 (MQ=255) ttACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGcc > 1:3143107/1‑100 (MQ=255) tACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑GCCCGATC‑GGCTGGCAtttttatc < 2:3541994/100‑5 (MQ=38) aCCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCtt > 1:275227/1‑100 (MQ=255) ccGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑GCCCGATC‑GGCTGGCAtttttatctca < 2:1728115/100‑8 (MQ=37) ccGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTa > 2:1397382/1‑100 (MQ=255) cGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAg < 2:3121197/100‑1 (MQ=255) cGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAg < 1:2242613/100‑1 (MQ=255) gCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAgg > 2:1954284/1‑100 (MQ=255) aCGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGAt < 1:3404073/100‑1 (MQ=255) aCGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGGAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGAt < 1:2721289/100‑1 (MQ=255) gAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGt < 1:2909464/100‑1 (MQ=255) aaaTGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAATAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTa < 1:1378012/100‑1 (MQ=255) gCGGCACGACTGGATCCAGTAGATGCTCTGGAACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTac < 2:1704898/97‑1 (MQ=255) cGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACaa > 2:2089974/1‑100 (MQ=255) cGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACaa > 2:295843/1‑100 (MQ=255) ggCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAAt > 2:3274147/1‑100 (MQ=255) gCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATg < 1:3448226/100‑1 (MQ=255) cggcTGGATGCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATgag < 1:3695404/96‑1 (MQ=255) cGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATgaga > 2:3597044/1‑100 (MQ=255) gACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGAc < 2:3590495/100‑1 (MQ=255) aCTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACa < 1:1640663/100‑1 (MQ=255) aCTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACa > 2:3354750/1‑100 (MQ=255) aCTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACa > 2:3062128/1‑100 (MQ=255) aCTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACa < 1:907458/100‑1 (MQ=255) ggATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACagaa > 1:1351597/1‑100 (MQ=255) ggATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACagaa > 2:3212369/1‑100 (MQ=255) gATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACagaag > 2:3817876/1‑100 (MQ=255) gATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACagaag < 2:3643327/100‑1 (MQ=255) tCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCA‑TTTGCCTTTAGGATGTACACAATGAGACAGAAGAGc < 2:792945/100‑1 (MQ=255) cAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCt > 2:1780336/1‑100 (MQ=255) gTAGATGCTCTGGCACGAGAGTAATTTTTTAGTTATATATGCCA‑G‑CCGATCGGGCTGGCATTTTGACTTTAGGATGTACACAATGAGACAGAAGAGCTAt > 1:271876/1‑100 (MQ=255) gTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTAt > 1:133231/1‑100 (MQ=255) aGATGGTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTGAGGATGTACACAATGAGACAGAAGAGCTATga < 1:1945478/100‑2 (MQ=255) aGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGc > 2:96694/1‑100 (MQ=255) tGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGAc < 2:1091662/100‑1 (MQ=255) ctGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGcc > 2:60367/1‑100 (MQ=255) gCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCt < 1:409504/100‑1 (MQ=255) gCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCt < 2:62073/100‑1 (MQ=255) cACGAGAGTAATTTTTGAGATAATAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCtt > 1:2192232/1‑100 (MQ=255) aCGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTc < 1:3354730/100‑1 (MQ=255) cGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCt > 2:3180132/1‑100 (MQ=255) agagTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTAc > 2:2161524/1‑100 (MQ=255) tAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCg < 1:2588396/100‑1 (MQ=255) aTTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGAc < 1:1891645/100‑1 (MQ=255) tttttGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACg < 2:739743/100‑1 (MQ=255) tttttGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACg < 2:1644714/100‑1 (MQ=255) ttttGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACgg < 2:726533/100‑1 (MQ=255) ttttGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACgg < 2:188368/100‑1 (MQ=255) tttGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGTGCTATGCGACTGCCGCTGCTACTTCGACgcg < 2:2570919/100‑3 (MQ=255) tGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGca < 2:256073/100‑1 (MQ=255) gagaTAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGcac < 2:2032081/100‑1 (MQ=255) gaTAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACaa > 1:652213/1‑100 (MQ=255) gaTAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACaa > 2:773443/1‑100 (MQ=255) aTAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAAt < 1:216463/100‑1 (MQ=255) tAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATa > 2:862005/1‑100 (MQ=255) tAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATa > 2:916181/1‑100 (MQ=255) tAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACAGGCACAATa > 1:113367/1‑100 (MQ=255) aaaaaTGCCA‑G‑CCGATCGGGATGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATaa > 1:2331889/1‑100 (MQ=255) aaaTGCCA‑GCCCGATC‑GGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGCCTGCCGCTTCTACTTCGACGGGCACAATAaca > 1:497995/1‑100 (MQ=38) aaaTGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAaca > 2:2753300/1‑100 (MQ=255) aaaTGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAaca > 2:1381384/1‑100 (MQ=255) aaTGCCA‑GCCCGATC‑GGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAacac > 2:2117234/1‑100 (MQ=39) aTGCCA‑GCCCGATC‑GGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAACACt > 2:3545819/1‑100 (MQ=39) aTGCCA‑GCCCGATC‑GGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAACACt > 2:1256866/1‑100 (MQ=39) tGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAACACTg > 2:2790600/1‑100 (MQ=255) gCCA‑GCCCGATC‑GGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAACACTgg > 2:679588/1‑100 (MQ=255) cA‑G‑CCGATCGGGCTGGCATTGTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAACACTGGCg < 1:1212373/100‑1 (MQ=255) a‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCAGCTTCTACTTCGACGGGCACAATAACACTGGCGt > 1:3565478/1‑100 (MQ=255) g‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAACACTGGCGTg < 2:3116530/100‑1 (MQ=255) g‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTCCCGCTTCTACTTCGACGGGCACAATAACACTGGCGTg < 1:2037421/100‑1 (MQ=255) | CACCGGGATTTTATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAATTTTTGAGATAAAAATGCCA‑G‑CCGATCGGGCTGGCATTTTGCCTTTAGGATGTACACAATGAGACAGAAGAGCTATGCGACTGCCGCTTCTACTTCGACGGGCACAATAACACTGGCGTG > NC_000913/922215‑922413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |