| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 46077 | 115 (0.850) | 22 (0.180) | 11/164 | NT | 16.6% | coding (271/1332 nt) | yaaU | putative MFS sugar transporter; membrane protein |
| ? | NC_000913 | = 46089 | 115 (0.920) | coding (283/1332 nt) | yaaU | putative MFS sugar transporter; membrane protein | |||||
GGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/45972‑46077‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatatca‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGCG < NC_000913/46089‑45991 GGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTG > 1:3664369/1‑100GGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTG < 2:1980006/100‑1GGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTG > 1:2769398/1‑100 GCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTTGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGA < 2:2537225/100‑1 GCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGA > 1:2819209/1‑100 GCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGA > 2:250239/1‑100 GCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGA > 2:2482157/1‑100 GCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGA > 2:2385685/1‑100 GCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGA < 1:1663862/100‑1 CTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGAT < 2:1927792/100‑1 TGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTAGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATA < 1:3383754/99‑1 TGCTGGGCACGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATAT < 1:2538373/100‑1 CTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA > 2:3371157/1‑100 CGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGAT > 1:357919/1‑100 CTCGCCGGGCTTTTCGTTGGCACATCGCTGTTTGGTTATACTTCCGATAACGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGA < 1:1498918/100‑1 TCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTCTATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGA < 1:2570291/99‑1 GCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATAT < 1:3235879/100‑1 GCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATAT < 2:1285153/100‑1 cgGGGCTGTTCGTTTGCACATCGCTGTTTGGTGAGATTTCCTATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATATC < 2:1650169/98‑1 CCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACTGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATATC < 2:3715930/100‑1 CCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATATC < 2:2268609/100‑1 CCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATATC < 1:121267/100‑1 CGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATATC < 1:2204821/99‑1 GGGCTGTTCGTTGGCACATCGCTTTCTGGTTATATTTCCGATAAAGGCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATATC < 1:2327946/98‑1 GGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGAAGATATCAAT < 1:250234/100‑1 GCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCTATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATATCAATG < 1:227516/100‑1 CTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGAGAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GACGATGATATCAATGA < 1:911363/100‑1 TGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCACCGATATCA‑CGCCGAT‑GGCGATGATATCAATGAG < 1:1983383/100‑1 GTTCGTTGGGACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATATCAATGAGG < 2:3355281/100‑1 GTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCACCGATATCA‑CGCCGAT‑GGCGATGATATCAATGAGG < 1:1644423/100‑1 TTCGTTGGCACAGCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATATCAATGAGGA < 1:11743/100‑1 taGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGGCGGACGGCGCAAAATGTTCCTCATTGATATCA‑CGCCGAT‑GGCGATGATATCAATGAGGA < 1:3777250/97‑1 GCAAAATGTTCCTCATTGATATCATCGCC‑ATCGGCG‑TGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGT > 2:357924/1‑100 CTCATTGATATCATCGCCATC‑GGCG‑TGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACA > 1:3348696/1‑100 CTCATTGATATCATCGCC‑ATCGGCG‑TGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACA > 2:2814154/1‑100 CATTGATATCATCGCC‑ATCGGCG‑TGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGC > 2:76132/1‑100 ATCA‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACAAAACAGCGATGTGCCAACGAACAGCCCGGCGA > 1:3382461/1‑100 TCA‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAG > 2:3458454/1‑100 TCA‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAG < 1:1444421/100‑1 TCA‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAG < 1:3291413/100‑1 TCA‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGC > 1:3499876/1‑97 TCA‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGC < 1:3571289/97‑1 nA‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGC > 1:210257/2‑100 CA‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGC > 2:2399247/1‑100 CA‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGC > 2:58680/1‑100 CA‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAG > 1:2597106/1‑99 A‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGTCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGCG < 1:2070527/100‑1 A‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGCG > 1:105342/1‑100 A‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGCG > 2:1065986/1‑100 A‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGCG < 2:249591/100‑1 A‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGCG < 1:356412/100‑1 A‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGCG > 2:1721951/1‑100 A‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGCG < 1:68648/100‑1 A‑CGCCGAT‑GGCGATGATATCAATGAGGAACATCTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGCG < 2:970263/100‑1 GGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/45972‑46077‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatatca‑CGCCGAT‑GGCGATGATATCAATGAGGAACATTTTGCGCCGTCCGACTTTATCGGAAATATAACCAAACAGCGATGTGCCAACGAACAGCCCGGCGAGCG < NC_000913/46089‑45991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |