| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 50326 | NA (NA) | 10 (0.080) | 7/164 | NT | NA | intergenic (+24/+54) | folA/apaH | dihydrofolate reductase/diadenosine tetraphosphatase |
| ? | NC_000913 | = 50359 | NA (NA) | noncoding (33/37 nt) | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
TATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccggat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/50229‑50326‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGATAAGACGCGACCGGCGTCGCATCCGGCGCTAGCCGTAAATTCTATACAAAATTACCGCCGCTCCAGAATCTCAAAGCAATAGCTGTGAGAGTTCTGCGCA < NC_000913/50359‑50254 TATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGC > 2:3325784/1‑100 ATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCC < 1:1877374/100‑1 ATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCC < 2:1142574/100‑1 TTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCG < 1:2719708/100‑1 TCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGG < 2:2386136/100‑1 CAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGATCGGCGGGAATTTTGTATAGAATTTACGGCTAGCGCCGGA > 1:2676482/1‑100 AGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGAT < 1:1231525/100‑1 AGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGAT < 2:1768643/100‑1 AGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGAT > 2:1280666/1‑100 AGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGAT < 1:779308/100‑1 AGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGGATAGAATTTACGGCTAGCGCCGGAT < 1:3146921/100‑1 CGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTGCGGCTAGCGCCGGATAAGACGCGACCGGCGTCGCATC < 1:2037418/100‑1 GAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATAAGACGCGACCGGCGTCGCATCCGGC < 1:2056321/100‑1 AACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATAAGACGCGACCGGCGTCGCATCCGGCG < 2:1763226/100‑1 ACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATAAGACGCGACCGGCGTCGCATCCGGCGC < 2:2124227/100‑1 ACTCGCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATAAGACGCGACCGGCGTCGCATCCGGCGC < 1:2012242/100‑1 CTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATAAGACGCGACCGGCGTCGCATCCGGCGCT < 1:615239/100‑1 CTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATAAGACGCGACCGGCGTCGCATCCGGCGC < 2:3800780/99‑1 TCACATCTATTACTTTGAGATTCTGGAGCGGCGGTAATTTTGTTTAGAATTTACGGCTAGCGCCGGATAAGACGCGACCGGCGTCGCATCCGGCGCTAGC < 1:2442520/100‑1 TCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATAAGACGCGACCGGCGTCGCATCCGGCGCTAGC < 1:2014660/100‑1 CACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATAAGACGCGACCGGCGTCGCATCCGGCGCTAGCC < 1:3814283/100‑1 GCCGGATAAGACGCTACCGGCGTCGCATCCGGCGCTAGCCGTAAATTCTATACAAAATTACCGCCGCTCCAGAATCTCAAAGCAATAGCTGTGAGAGT < 1:1877957/98‑1 GCCGGATAAGACGCGACCGGCGTCGCATCCGGCGCTAGCCGTAAATTCTATACAAAATTACCGCCGCTCCAGAATCTCACAGCTATTGCTTTGAGAttct < 2:3148439/100‑5 CCGGATAAGACGCGACCGGCGTCGCATCCGGCGCTAGCCGTAAATTCTATACAAAATTACCGCCGCTCCAGAATCTCACAGCTATTGCTTTGAGA‑TTCTG < 2:2979456/100‑1 CGGATAAGACGCGACCGGCGTCGCATCCGGCGCTAGCCGTAAATTCTATACAAAATTACCGCCGCTCCAGAATCTCAAAGCAATAGCTGTGAGAGTTCTG < 2:831442/100‑1 CGGATAAGACGCGACCGGCGTCGCATCCGGCGCTAGCCGTAAATTCTATACAAAATTACCGCCGCTCCAGAATCTCAAAGCAATAGCTGTGAGAGTTCTG < 1:437835/100‑1 GATAAGACGCGACCGGCGTCGCATCCGGCGCTAGCCGTAAATTCTATACAAAATTACCGCCGCTCCAGAATCTCAAAGCAATAGCTGTGAGAGTTCTGCG < 1:152259/100‑1 ATAAGACGCGACCGGCGTCGCATCCGGCGCTAGCCGTAAATTCTATACAAAATTACCGCCGCTCCAGAATCTCAAAGCAATAGCTGTGAGAGTTCTGCGC < 1:530731/100‑1 TAAGACGCGACCGGCGTCGCATCCGGCGCTAGCCGTAAATTCTATACAAAATTACCGCCGCTCCAGAATCTAAAAGCAATAGCTGTGAGAGTTCTGCGCA > 2:2995842/1‑100 TATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccggat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/50229‑50326‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGATAAGACGCGACCGGCGTCGCATCCGGCGCTAGCCGTAAATTCTATACAAAATTACCGCCGCTCCAGAATCTCAAAGCAATAGCTGTGAGAGTTCTGCGCA < NC_000913/50359‑50254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |