| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 632332 | 116 (0.860) | 21 (0.160) | 13/172 | NT | 15.3% | coding (151/198 nt) | ybdD | DUF466 family protein |
| ? | NC_000913 | = 632374 | 121 (0.930) | coding (193/198 nt) | ybdD | DUF466 family protein | |||||
AGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/632231‑632332‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑a‑‑‑gcAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGGAAAAACTCTTCGTAGGTCATCGGCGTTTGATCGGGATGGTTAACCCGCA < NC_000913/632374‑632276 AGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA < 2:200445/100‑1AGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA < 2:200043/100‑1AGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA > 2:2921889/1‑100AGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA < 2:750828/100‑1 CTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GC > 1:964608/1‑100 CTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAG > 2:2529743/1‑100 CATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCGGCAGGACGCGCGCCGCCTTTTCCACCGTAGCGCGCGTC < 1:864545/100‑1 ATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCGGCAGGACGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCC < 2:11895/100‑1 ATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCGGCAGGACGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCC < 2:757040/100‑1 ATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCGGCAGGACGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCC < 2:1832125/100‑1 ATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCT < 2:1054267/100‑1 GCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCGGCAGGACGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCC < 1:3775943/100‑1 GGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCA > 1:1802911/1‑100 GTTAACCGTCCCGATCAAACGCCGATGACCTACGTAGAGTTTTTCCGTGA‑‑‑GCACCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCAC < 1:615552/100‑1 GTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCAC < 1:390364/100‑1 GTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCAC < 2:2077231/100‑1 GTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCAC < 1:2496173/100‑1 TTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACG < 1:554676/100‑1 TAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGG < 2:336263/100‑1 AACCATCCCGATCAAACGCCGATGTCCTACGAAGAGTTTTTCCGTGA‑‑‑GCGGCAGGACGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACG < 2:1135027/100‑1 AACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCAC < 2:888009/100‑1 AACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGGA < 2:3526965/100‑1 CATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGGAAAA < 2:1802920/100‑1 ATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGGAAAAA < 2:1312866/100‑1 ATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGGAAAAA < 2:1098769/100‑1 TCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGGAAAAAC < 1:2529731/100‑1 A‑‑‑GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGGAAAAACTCTTCGTAGGTCATCGGCGTTTGATCGAGATcggaagagcg > 1:291541/1‑90 GCAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGGAAAAACTCTTCGTAGGTCATCGGCGTTTGATCGGGATGGTTAACCCGC > 1:2369109/1‑100 CAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGGAAAAACTCTTCGTAGGTCATCGGCGTTTGATCGGGATGGTTAACCCGCA < 2:163767/100‑1 AGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGA‑‑‑GC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/632231‑632332‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑a‑‑‑gcAGCAG‑‑CGCGCGCCGCCTTTTCCACCGTAGCGCGCGTCCTGCCGCTCACGGAAAAACTCTTCGTAGGTCATCGGCGTTTGATCGGGATGGTTAACCCGCA < NC_000913/632374‑632276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |