New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2617939 =NA (NA)14 (0.110) 9/164 NT NA intergenic (+2/+136) yfgD/hda putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation
?NC_000913 2617967 = NA (NA)intergenic (+30/+108) yfgD/hda putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation

Only 100 of 193 total aligned reads displayed.

TGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGAT  >  NC_000913/2617840‑2618037
                                                                                                   |                                                                                                  
ttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaa                                                                                                    <  2:2972761‑M1/1‑1 (MQ=255)
tggATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGa                                                                                                    <  1:2514063/100‑1 (MQ=255)
tggATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGa                                                                                                    >  1:3476494/1‑100 (MQ=255)
   ttgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccagataagacgtggcaagcgtcgcatccggcaAtg                                                                                                  >  1:2951226‑M1/97‑99 (MQ=255)
    tgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaAtgtg                                                                                                >  1:1626041‑M1/96‑100 (MQ=255)
     gtcggatgcggcgcgaacgccttatccgaactacgcgacgttaatccatagtatccgtaggccggacaagacgtggcaagcgtcgcatccggcaAtgtg                                                                                                <  1:1388907‑M1/5‑1 (MQ=255)
     gtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGc                                                                                               <  1:1288099‑M1/6‑1 (MQ=255)
     gtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGc                                                                                               <  1:1910380‑M1/6‑1 (MQ=255)
     gtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGc                                                                                               >  1:1340553‑M1/95‑100 (MQ=255)
     gtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacggggcaagcgtcgcatccggcaATGTGc                                                                                               <  1:2591638‑M1/6‑1 (MQ=255)
      aTCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGc                                                                                               >  2:2184283/1‑99 (MQ=255)
      aTCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCt                                                                                              <  2:3294159/100‑1 (MQ=255)
      aTCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCt                                                                                              <  2:448313/100‑1 (MQ=255)
        ccGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCt                                                                                              <  2:425191/98‑1 (MQ=255)
        ccGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTcc                                                                                            <  1:1496490/100‑1 (MQ=255)
         cGAAGCTGATGGAGCGCCCGAGTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCa                                                                                           <  1:1281043/100‑1 (MQ=255)
            aGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCg                                                                                        >  2:590789/1‑100 (MQ=255)
            aGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCg                                                                                        <  2:3122555/100‑1 (MQ=255)
            aGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCg                                                                                        >  2:1659563/1‑100 (MQ=255)
             gCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTTGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGc                                                                                       <  1:852738/100‑1 (MQ=255)
             cggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGc                                                                                       <  1:1440994‑M1/14‑1 (MQ=255)
               tGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCt                                                                                      >  1:3206474/1‑99 (MQ=255)
                tccgatctgcCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAg                                                                                    <  1:3409203/92‑1 (MQ=255)
                 aTGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGt                                                                                   >  1:1001759/1‑100 (MQ=255)
                 aTGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGt                                                                                   <  2:797580/100‑1 (MQ=255)
                   ggAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTg                                                                                 <  2:2173147/100‑1 (MQ=255)
                    gAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGa                                                                                <  2:149647/100‑1 (MQ=255)
                     aGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGaa                                                                               <  1:1827421/100‑1 (MQ=255)
                       cgcCCGATTGTGGTTGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGGGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTGGaa                                                                               >  1:2222496/1‑98 (MQ=255)
                       cgcCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGc                                                                             <  2:3348011/100‑1 (MQ=255)
                       cgcCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGc                                                                             <  2:2051453/100‑1 (MQ=255)
                         cttatccgaactgcgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGcac                                                                           >  1:2690206‑M1/75‑100 (MQ=255)
                           cGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACAt                                                                         >  2:1319873/1‑100 (MQ=255)
                            gATTGTGCTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACAtt                                                                        >  2:1996878/1‑100 (MQ=255)
                            atccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACAtt                                                                        >  1:560002‑M1/72‑100 (MQ=255)
                             tccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTg                                                                       >  2:2151657‑M1/71‑100 (MQ=255)
                              ccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGc                                                                      >  1:2831575‑M1/70‑100 (MQ=255)
                              ccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGc                                                                      >  2:1441002‑M1/70‑100 (MQ=255)
                               cgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGcc                                                                     >  2:3031686‑M1/69‑100 (MQ=255)
                                gtgGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCg                                                                    <  2:2761304/100‑1 (MQ=255)
                                gatctacgcgaagttaatccatcgtagtcgtaggccggataagacgcggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGCCg                                                                    >  1:3489734‑M1/68‑100 (MQ=255)
                                gaactacgcgaagttagtgcatagtattcggaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGCCg                                                                    >  1:1607884‑M1/68‑100 (MQ=255)
                                 aactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGCCgg                                                                   >  2:3699675‑M1/67‑100 (MQ=255)
                                  ggTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGa                                                                  >  1:3209787/1‑100 (MQ=255)
                                  ggTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGa                                                                  >  2:239600/1‑100 (MQ=255)
                                  actacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACAttgcctga                                                                  >  2:3296031‑M1/66‑97 (MQ=255)
                                   ttccgatctGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGAt                                                                 <  1:1305218/92‑1 (MQ=255)
                                   gTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGAt                                                                 >  1:3527605/1‑100 (MQ=255)
                                   gTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGAt                                                                 >  1:2102801/1‑100 (MQ=255)
                                   gTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGAt                                                                 <  1:3065449/100‑1 (MQ=255)
                                   gTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGAt                                                                 >  2:2548326/1‑100 (MQ=255)
                                    tCGCGAATGGCAAAGCGGGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATg                                                                <  1:3168401/100‑1 (MQ=255)
                                    tCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATg                                                                >  2:3081901/1‑100 (MQ=255)
                                     cgcgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGc                                                               >  1:1683273/1‑100 (MQ=255)
                                     cgcgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGc                                                               >  2:1109001/1‑100 (MQ=255)
                                     acgcgaagttaatccatagtatgcgtaggcgggataagacttggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGc                                                               >  1:1003087‑M1/63‑100 (MQ=255)
                                      gcgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGc                                                               >  1:1329692/1‑99 (MQ=255)
                                        gAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGAc                                                            <  2:958260/100‑1 (MQ=255)
                                        gAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGAc                                                            <  1:3151012/100‑1 (MQ=255)
                                           tGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCt                                                         >  2:1921931/1‑100 (MQ=255)
                                             gCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTg                                                       <  1:1237400/100‑1 (MQ=255)
                                             gCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTg                                                       >  2:1565357/1‑100 (MQ=255)
                                               aaaGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGcc                                                     <  2:2497275/100‑1 (MQ=255)
                                                aaGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCa                                                    <  2:2947734/100‑1 (MQ=255)
                                                 aGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCa                                                    >  2:317240/1‑99 (MQ=255)
                                                 aGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCAc                                                   >  2:1423464/1‑100 (MQ=255)
                                                    gcgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTc                                                >  2:154228/1‑100 (MQ=255)
                                                     cgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCt                                               <  2:3647764/100‑1 (MQ=255)
                                                       gATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGNTGCNACGCTTGCCACGTCTTa                                             >  1:1934859/1‑100 (MQ=255)
                                                          tGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATcc                                          >  1:803177/1‑100 (MQ=255)
                                                           ggTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCg                                         >  1:403759/1‑100 (MQ=255)
                                                           ggTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCg                                         >  2:184288/1‑100 (MQ=255)
                                                            gtcgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCgg                                        >  2:3525711/1‑100 (MQ=255)
                                                            gtcgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCgg                                        <  1:2548314/100‑1 (MQ=255)
                                                              cgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGGAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                      >  1:2679262/1‑100 (MQ=255)
                                                              cgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                      <  1:2794237/100‑1 (MQ=255)
                                                              cgtcCACCGGAGCAGGGACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGGCTTATCCGGc                                       <  1:1023443/99‑1 (MQ=255)
                                                               gtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCt                                     <  2:1054005/100‑1 (MQ=255)
                                                               gtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCt                                     <  1:2184273/100‑1 (MQ=255)
                                                                tcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTa                                    >  1:1745128/1‑100 (MQ=255)
                                                                 ccACCGGAGCAGGTAGTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTAc                                   <  2:3753125/100‑1 (MQ=255)
                                                                  cACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGTCGCTTGCCACGTCTTATCCGGCCTACg                                  >  1:3802467/1‑100 (MQ=255)
                                                                  cACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACg                                  >  2:3471176/1‑100 (MQ=255)
                                                                  cACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCGAGTTGAATCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACg                                  <  1:432435/100‑1 (MQ=255)
                                                                        aGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACt                            <  2:2560777/100‑1 (MQ=255)
                                                                           aGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATg                         <  2:403764/100‑1 (MQ=255)
                                                                           aGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATg                         <  2:3504613/100‑1 (MQ=255)
                                                                            ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                        <  1:1082937/100‑1 (MQ=255)
                                                                              tACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAt                      <  2:1063735/100‑1 (MQ=255)
                                                                              tACTGGAAATCGTGGCTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCGGGATGCGCCGCTTGCCACGTCTTATCCGGCCTACGAAAACTATGGAt                      >  1:2317564/1‑100 (MQ=39)
                                                                               aCTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGTTTGCCACGTCTTATCCGGCCTACGAATACTATGGAt                      <  2:2696110/99‑1 (MQ=255)
                                                                               aCTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAtt                     >  2:1960417/1‑100 (MQ=255)
                                                                                cTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTa                    >  1:119672/1‑100 (MQ=255)
                                                                                cTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCAACGTCTTATCCGGCCTACGAATACTATGGATTa                    <  2:1299996/100‑1 (MQ=255)
                                                                                 tGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTaa                   >  1:3276679/1‑100 (MQ=255)
                                                                                   gAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACt                 <  2:1893519/100‑1 (MQ=255)
                                                                                    aaaTCGTGGTTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGTATGCGACGCTTGCCACGTCTTATCCGGCCTATGAATACTATGGATTAACt                 <  1:126899/99‑1 (MQ=255)
                                                                                    aaaTCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACtt                >  1:1409072/1‑100 (MQ=255)
                                                                                         gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt           <  2:1260263/100‑1 (MQ=255)
                                                                                                 aGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGa   >  2:185527/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
TGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGAT  >  NC_000913/2617840‑2618037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.