BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4240157 =	NA (NA)	7 (0.060)	5/164	NT	NA	noncoding (1/37 nt)	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	4240190 =	NA (NA)	7 (0.060)	5/164	NT	NA	noncoding (34/37 nt)	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 190 total aligned reads displayed.

TTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACAC  >  NC_000913/4240059‑4240255

acgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGc                                                                                                   <  1:490349‑M1/2‑1 (MQ=255)

acgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGc                                                                                                   <  2:2542401‑M1/2‑1 (MQ=255)

 tCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTTATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGcc                                                                                                  <  1:2348298/100‑1 (MQ=255)

 cgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGcc                                                                                                  >  2:890645‑M1/98‑100 (MQ=255)

 cgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGcc                                                                                                  <  2:2196291‑M1/3‑1 (MQ=255)

 cgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGcc                                                                                                  <  2:2046746‑M1/3‑1 (MQ=255)

  gcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCg                                                                                                 >  2:2218565‑M1/97‑100 (MQ=255)

  ccAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAACGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCg                                                                                                 >  1:118841/1‑100 (MQ=255)

   cAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCgg                                                                                                <  1:902202/100‑1 (MQ=255)

   cAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCgg                                                                                                >  2:127036/1‑100 (MQ=255)

   cAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCgg                                                                                                >  1:2460059/1‑100 (MQ=255)

     gagGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGAt                                                                                              <  1:698878/100‑1 (MQ=255)

     gagGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGAt                                                                                              <  1:282159/100‑1 (MQ=255)

     gagGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGAt                                                                                              <  2:3445174/100‑1 (MQ=255)

       tctaCATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATgc                                                                                            <  2:990910/97‑1 (MQ=255)

       ggAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATgc                                                                                            <  1:362819/100‑1 (MQ=255)

        gAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATgcg                                                                                           <  2:1313043/100‑1 (MQ=255)

         aaCATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATgcgc                                                                                          >  2:1896660/1‑100 (MQ=255)

                 cGATTTTTCGCGCATTTCTTGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGGTTTGGTGCGGTTTGTCTTGCCGGATTcgcctctagtc                                                                                  >  1:2629855/1‑93 (MQ=255)

                 cGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGgc                                                                                  <  1:804743/100‑1 (MQ=255)

                 cGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGgc                                                                                  >  2:3063987/1‑100 (MQ=255)

                  gATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGgcg                                                                                 <  1:1387277/100‑1 (MQ=255)

                   aTTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGgcgc                                                                                >  2:102392/1‑100 (MQ=255)

                      tttCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGc                                                                             <  2:1728368/100‑1 (MQ=255)

                      tttCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGCTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGcgcg                                                                               >  1:1526816/1‑98 (MQ=255)

                       ttCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCt                                                                            <  2:2403722/100‑1 (MQ=255)

                          gcgcATTGCTGGTGGCTGGGAATCACCTGAATGGGTCATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTAt                                                                         <  2:2678305/100‑1 (MQ=255)

                           cgcATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGTTTTGGTGCGGTTTGTCTTGCCGGATTCGCCGCCAGGCGCGGCTTAt                                                                         >  1:2216442/1‑99 (MQ=255)

                            ttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATcc                                                                       >  2:1870365‑M1/71‑100 (MQ=255)

                            ttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATcc                                                                       >  2:3301104‑M1/71‑100 (MQ=255)

                              ttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccgcatataccgacccgtagGCCGGATTCGCCGCCAGGCGCGGCTTATCCgg                                                                     >  1:1696198‑M1/69‑100 (MQ=255)

                              aTTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCgg                                                                     <  2:3112708/100‑1 (MQ=255)

                              aTTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCgg                                                                     <  1:2055379/100‑1 (MQ=255)

                               ttGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGc                                                                    <  2:874470/100‑1 (MQ=255)

                               tgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGc                                                                    >  1:3544000‑M1/68‑100 (MQ=255)

                                tGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGAGCCGCCAGGCGCGGCTTATcccg                                                                     >  1:302253/1‑96 (MQ=255)

                                  cTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                   >  1:3268409/1‑98 (MQ=255)

                                  cTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTa                                                                 >  2:1813801/1‑100 (MQ=255)

                                  cTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTa                                                                 >  2:3558330/1‑100 (MQ=255)

                                   tatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTAc                                                                >  1:1606269‑M1/64‑100 (MQ=255)

                                    ggtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACg                                                               <  2:3773788/100‑1 (MQ=255)

                                         cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                          >  2:2973282/1‑100 (MQ=255)

                                         cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                          <  1:17987/100‑1 (MQ=255)

                                         cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                          >  2:3730115/1‑100 (MQ=255)

                                          tGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtagg                                                         <  2:1612984/100‑1 (MQ=255)

                                          tGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtagg                                                         <  1:3199243/100‑1 (MQ=255)

                                          tGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtagg                                                         <  1:2490005/100‑1 (MQ=255)

                                           gggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGTCGCGGCTTATCCGGCCTACGggtagg                                                         >  1:3510632/1‑99 (MQ=255)

                                           gggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                        >  1:517513/1‑100 (MQ=255)

                                           gggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                        >  2:3684053/1‑100 (MQ=255)

                                            ggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggta                                                       <  1:988433/100‑1 (MQ=255)

                                            ggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggta                                                       <  2:2501717/100‑1 (MQ=255)

                                            ggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggca                                                       <  2:3371068/100‑3 (MQ=255)

                                            ggAATCACCTGAATGGGTGATTTTTGAATTACCGGATTTGGTGCGGTTTGTCTTGCCGGATGCGCCACCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                        <  1:1955179/99‑1 (MQ=255)

                                                 cACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATcc                                                  <  1:1921231/100‑1 (MQ=255)

                                                     tGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCt                                              >  1:2103223/1‑100 (MQ=255)

                                                      gAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCtt                                             >  2:399649/1‑100 (MQ=255)

                                                       aaTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCttt                                            <  2:1122881/100‑1 (MQ=255)

                                                       aaTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCttt                                            <  1:3556677/100‑1 (MQ=255)

                                                         tGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtgg                                          >  2:2018445/1‑100 (MQ=255)

                                                         tGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtgg                                          <  1:2470918/100‑1 (MQ=255)

                                                         tGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtgg                                          <  2:95073/100‑1 (MQ=255)

                                                          gggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGATTATCCGGACTACGGGTAGGTATTTTCGGCTTtagt                                         >  2:2609860/1‑100 (MQ=255)

                                                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                        <  2:1927566/100‑1 (MQ=255)

                                                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                        >  2:3173423/1‑100 (MQ=255)

                                                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                        <  2:3385876/100‑1 (MQ=255)

                                                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                        <  1:1962870/100‑1 (MQ=255)

                                                             tGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGa                                      >  1:3372067/1‑100 (MQ=255)

                                                               aTTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAgg                                    >  1:2416898/1‑100 (MQ=255)

                                                               aTTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAgg                                    <  1:1430415/100‑1 (MQ=255)

                                                                tttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAg                                     >  1:3166743/1‑98 (MQ=255)

                                                                  tttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgc                                 <  1:928528/100‑1 (MQ=255)

                                                                     gAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCt                              >  1:2713863/1‑100 (MQ=255)

                                                                     gAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCt                              <  2:2082637/100‑1 (MQ=255)

                                                                       aTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTcc                            <  2:1346457/100‑1 (MQ=255)

                                                                        ttACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCa                           <  2:2790983/100‑1 (MQ=255)

                                                                         tACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaa                          >  1:1736332/1‑100 (MQ=255)

                                                                          aCCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCTGGATTTTCTGGAGGCGCGCTCCaaa                         >  2:1665318/1‑100 (MQ=255)

                                                                          aCCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaa                         >  2:3802179/1‑100 (MQ=255)

                                                                           ccGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAAt                        <  2:2438937/100‑1 (MQ=255)

                                                                               cTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                    <  2:1187124/100‑1 (MQ=255)

                                                                               cTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                    <  2:1401369/100‑1 (MQ=255)

                                                                                tttGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAgg                   <  1:513241/100‑1 (MQ=255)

                                                                                 ttGGTGCGGTTTGTCGTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATAGCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGt                  <  1:674644/100‑1 (MQ=255)

                                                                                   ngTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                >  1:417704/2‑100 (MQ=255)

                                                                                   ggTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                >  2:3260939/1‑100 (MQ=255)

                                                                                     tGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGaa              <  2:2860132/100‑1 (MQ=255)

                                                                                      gCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAAc             <  1:3326448/100‑1 (MQ=255)

                                                                                         gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaa          >  1:3767995/1‑100 (MQ=255)

                                                                                          tttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACAGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaaa         <  1:2818467/100‑1 (MQ=255)

                                                                                           ttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAAc        >  2:1225565/1‑100 (MQ=255)

                                                                                             gTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACAt      >  2:608687/1‑100 (MQ=255)

                                                                                             gTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACAt      <  2:91391/100‑1 (MQ=255)

                                                                                             gTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACAt      >  1:122733/1‑100 (MQ=255)

                                                                                              tCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATa     <  2:1658779/100‑1 (MQ=255)

                                                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac    >  2:2355193/1‑100 (MQ=255)

                                                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac    <  2:565750/100‑1 (MQ=255)

                                                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac    >  1:3224126/1‑100 (MQ=255)

                                                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGACTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac    >  1:2847486/1‑100 (MQ=255)

                                                                                                 tGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATacac  >  1:345338/1‑100 (MQ=255)

TTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACAC  >  NC_000913/4240059‑4240255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.