New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4602159 =128 (0.950)16 (0.130) 9/164 NT 12.4% coding (700/771 nt) yjjP DUF1212 family inner membrane protein
?NC_000913 4602186 = 109 (0.870)coding (673/771 nt) yjjP DUF1212 family inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 169 total aligned reads displayed.

TCCTGCGCCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAAC  >  NC_000913/4602060‑4602258
                                                                                                   |                                                                                                   
tCCTGCGCCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTcagcag                                                                                                     >  2:1307318/1‑100 (MQ=255)
tCCTGCGCCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTcagcag                                                                                                     <  2:2940873/100‑1 (MQ=255)
tCCTGCGCCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTcagcag                                                                                                     >  2:1793010/1‑100 (MQ=255)
cccccaccattgcgatggccgccagcgttctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgg                                                                                                     >  2:789386‑M1/100‑100 (MQ=255)
cccccaccattgcgatggccgccagcgttctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgg                                                                                                     >  1:3417144‑M1/100‑100 (MQ=255)
cccccaccattgcgatggccgccagcgttctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgg                                                                                                     <  2:1578466‑M1/1‑1 (MQ=255)
 ccTGCGCCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTCCGCCGACGCAGGTAGCCAGTGTCAGCAGa                                                                                                    >  1:2521146/1‑100 (MQ=255)
  cccaccattgcgatggccgccagcgttctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGAc                                                                                                   >  2:322137‑M1/98‑100 (MQ=255)
  cccaccattgcgatggccgccagcgttctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGAc                                                                                                   >  1:2838253‑M1/98‑100 (MQ=255)
  cTGCGCCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGAc                                                                                                   >  2:3263165/1‑100 (MQ=255)
    gcgcCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTAAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTg                                                                                                 >  2:2271911/1‑100 (MQ=255)
    caccattgcgatggccgccagcgttctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTg                                                                                                 >  2:678696‑M1/96‑100 (MQ=255)
    caccattgcgatggccgccagcgttctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTg                                                                                                 <  2:3332451‑M1/5‑1 (MQ=255)
     cgcCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTgg                                                                                                >  1:461249/1‑100 (MQ=255)
     cgcCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTgg                                                                                                <  1:1773233/100‑1 (MQ=255)
     cgcCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGAAGCCAGTGTCAGCAGACTgg                                                                                                >  1:3292269/1‑100 (MQ=255)
      ggcAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTgg                                                                                                <  1:1250259/97‑1 (MQ=255)
      ccattgcgatggccgccagcgttctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTgg                                                                                                >  1:1276762‑M1/94‑99 (MQ=255)
           cGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCg                                                                                          <  2:235015/100‑1 (MQ=255)
            gCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGc                                                                                         <  2:722633/100‑1 (MQ=255)
               aaCAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCa                                                                                      >  2:1719398/1‑100 (MQ=255)
                  aGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCg                                                                                   <  1:1016499/100‑1 (MQ=255)
                     aaTTCGGTCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGc                                                                                <  1:3533206/100‑1 (MQ=255)
                     aaTTCGATCACACCCATCCGCGTAGCCCCAAAATCGTCAGTGCCCTCACTACGCCGACGCAGGCAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTg                                                                                 >  1:3193312/1‑99 (MQ=255)
                      aTTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGcc                                                                               <  1:3616240/100‑1 (MQ=255)
                       ttCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCa                                                                              >  2:2917542/1‑100 (MQ=255)
                        gcgttctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAg                                                                             >  2:2182132‑M1/76‑100 (MQ=255)
                         cGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGt                                                                            >  1:2936227/1‑100 (MQ=255)
                         cGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGt                                                                            >  1:3535045/1‑100 (MQ=255)
                           aTCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTcc                                                                          >  1:1504007/1‑100 (MQ=255)
                            tCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTcc                                                                          <  1:3429160/99‑1 (MQ=255)
                            tCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCg                                                                         <  2:1502726/100‑1 (MQ=255)
                             ctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAGTCcgn                                                                        >  2:2186023‑M1/71‑99 (MQ=255)
                             ctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                        >  2:1015457‑M1/71‑100 (MQ=255)
                             ctgctgctagtgccgggctttccgttgattaatgccctcgccgatatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                        >  2:2680382‑M1/71‑100 (MQ=255)
                             ctgctgctagtgccgggcttgcccttgattaatgccgtcgccgatatgtttaaaggccacatccgtaccgGACTGTCGATCGCCCAGCGTGCCAGTCCg                                                                         >  1:25230‑M1/71‑99 (MQ=255)
                             cacaCCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                        <  1:2788444/100‑1 (MQ=255)
                             cacaCCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                        >  2:1928604/1‑100 (MQ=255)
                             cacaCCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                        >  2:1853627/1‑100 (MQ=255)
                              tgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                        >  1:3796919‑M1/70‑99 (MQ=255)
                              tgctgctagtgccgggcttgccgttgattaatgccgtcgccgatatgtttacaggccacatcaataccgGGCTGGCGATCGCCCAGCGTGCCAGTCCGGt                                                                       >  1:718747‑M1/70‑100 (MQ=255)
                                 cccATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTAtt                                                                    >  2:210586/1‑100 (MQ=255)
                                 cccATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTAtt                                                                    >  1:2341646/1‑100 (MQ=255)
                                  gctagtgccggggtttccgttgattaatgcctgcgccgatatgtgtaaaggcctcatcaatactgTACTGGCGATCGCCCAGCGTGCCAGTCCGGTAt                                                                     >  1:2149253‑M1/66‑98 (MQ=255)
                                   cATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGa                                                                  >  2:546647/1‑100 (MQ=255)
                                   cATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGa                                                                  <  1:2680970/100‑1 (MQ=255)
                                     tCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGAtg                                                                <  1:2650743/100‑1 (MQ=255)
                                       cgcgTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGAtgtg                                                              <  1:818851/100‑1 (MQ=255)
                                         ccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGc                                                            >  1:3498651‑M1/59‑100 (MQ=255)
                                            aGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCtt                                                         <  2:746924/100‑1 (MQ=255)
                                             gCCCCCAAATCGTCAGTGCCTTCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCttt                                                        >  1:2325711/1‑100 (MQ=255)
                                             gCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCttt                                                        >  1:481245/1‑100 (MQ=255)
                                             gCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCttt                                                        <  2:2684184/100‑1 (MQ=255)
                                              cccccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTa                                                       <  2:818830/100‑1 (MQ=255)
                                              cccccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTa                                                       <  2:1385823/100‑1 (MQ=255)
                                              cccccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTa                                                       >  1:1074667/1‑100 (MQ=255)
                                               ccccTAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGTGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTaa                                                      <  1:3020449/100‑1 (MQ=255)
                                               ccccAGCTCGTCAGTGCCATCAATACGCCGACGCAGGTAGCAAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTa                                                       <  1:1265230/99‑1 (MQ=255)
                                               ccccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCtttca                                                      >  1:3332432/1‑98 (MQ=255)
                                               ccccAAATCGTCAGTGCCAGCACTACGCCGACGCAGGTGGCCAGTGTCAGCAGTCTGGCGGTCGCCCCGCGGGCCAGTCCGGTATTGATGTGGCCttt                                                        <  1:3773528/98‑1 (MQ=255)
                                                cccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTaaa                                                     <  2:2955826/100‑1 (MQ=255)
                                                cccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTaaa                                                     <  2:3000758/100‑1 (MQ=255)
                                                cccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTaaa                                                     >  2:1826036/1‑100 (MQ=255)
                                                 ccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAAc                                                    <  1:144374/100‑1 (MQ=255)
                                                 ccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAAc                                                    <  2:2889922/100‑1 (MQ=255)
                                                    aaTCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACata                                                 <  2:242419/100‑1 (MQ=255)
                                                        gTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCgg                                             <  2:2194404/100‑1 (MQ=255)
                                                        gTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCgg                                             >  2:1834058/1‑100 (MQ=255)
                                                         ttaatgccgtcgccgatatgtttaaaggccacatcaagtccgGACTGGCGATCGCCCAGCGTTCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGc                                            >  1:71916‑M1/43‑100 (MQ=255)
                                                            gTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGAc                                         >  2:284750/1‑100 (MQ=255)
                                                            gTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGAc                                         <  2:2669864/100‑1 (MQ=255)
                                                              gCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGTGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACgg                                       <  1:2446909/100‑1 (MQ=255)
                                                              gCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGCCTTGATGCGGCCTTTAAACCTATCGGCGa                                          >  1:2141447/1‑97 (MQ=255)
                                                                cATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGc                                      >  1:361467/1‑99 (MQ=255)
                                                                 aTCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCAt                                    <  2:1645021/100‑1 (MQ=255)
                                                                  tctcTACGCCGACGCAGGTAGCAAGTGTCAGCAGACTGGCGATCGCCCAGCGCGCCAGTCCGGGATTGATGTGGCCTTTAAACATCTCGGAGACGGCAt                                    <  1:2271900/96‑1 (MQ=255)
                                                                  tCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCAtt                                   >  2:2513573/1‑100 (MQ=255)
                                                                  tCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCAtt                                   <  2:3419009/100‑1 (MQ=255)
                                                                    aCTACGCCGACGCAGGTAGCCAGTGTCGGCAGACTGGAGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTaa                                 >  2:433041/1‑100 (MQ=255)
                                                                    aCTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTaa                                 <  2:177434/100‑1 (MQ=255)
                                                                     cTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAAt                                >  1:1827995/1‑100 (MQ=255)
                                                                     cTACGCCGACGCAGGTAGCCAGCGTCAGCAGGCTGGCTATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAAt                                <  1:2571745/100‑1 (MQ=255)
                                                                        cGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCaa                             >  1:1993120/1‑100 (MQ=255)
                                                                             aCGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGaa                        <  2:1453331/100‑1 (MQ=255)
                                                                              cGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGaaa                       >  2:3508722/1‑100 (MQ=255)
                                                                               gCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACGTATCGGCGACGGCATTAATCAACGGaa                        <  1:2403198/98‑1 (MQ=255)
                                                                               gCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAg                      >  1:2669118/1‑100 (MQ=255)
                                                                                cAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGc                     <  1:1637350/100‑1 (MQ=255)
                                                                                cAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGc                     >  2:1071266/1‑100 (MQ=255)
                                                                                  ggTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGccc                   >  1:2870527/1‑100 (MQ=255)
                                                                                  ggTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGccc                   >  1:3012666/1‑100 (MQ=255)
                                                                                  ggTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGccc                   >  1:3512847/1‑100 (MQ=255)
                                                                                   gTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCg                  >  1:566567/1‑100 (MQ=255)
                                                                                      gCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCggga               <  2:2579087/100‑3 (MQ=255)
                                                                                      gCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCa               >  2:1289373/1‑100 (MQ=255)
                                                                                        cAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACt             <  2:534973/100‑1 (MQ=255)
                                                                                            gtCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagca         <  2:3323393/100‑1 (MQ=255)
                                                                                              cagcagACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagcagc       <  1:3708917/100‑1 (MQ=255)
                                                                                                gcagACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGcagcag     >  2:351806/1‑100 (MQ=255)
                                                                                                   GACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAGCATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGa    >  1:153956‑M1/1‑98 (MQ=255)
                                                                                                   |                                                                                                   
TCCTGCGCCAACGCTAACAGAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAAC  >  NC_000913/4602060‑4602258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.