New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4624006114 (0.840)4 (0.030) 4/168 NT 3.6% coding (112/1017 nt) lplA lipoate‑protein ligase A
?NC_000913 = 4624037 105 (0.820)coding (81/1017 nt) lplA lipoate‑protein ligase A
Rejected: Frequency below cutoff threshold.

Only 100 of 155 total aligned reads displayed.

GCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCG  >  NC_000913/4623907‑4624105
                                                                                                   |                                                                                                    
gccgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCA                                                                                                      <  1:777620‑M1/100‑1 (MQ=255)
gccgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCA                                                                                                      >  1:1422576‑M1/1‑100 (MQ=255)
gccgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCA                                                                                                      <  2:2741013‑M1/100‑1 (MQ=255)
 ccgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCag                                                                                                     <  2:1594914/100‑1 (MQ=255)
 ccgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCag                                                                                                     >  2:757867/1‑100 (MQ=255)
  cgcgctAGGCGGACGTTATCCTCTTCGATCCGCGTGGTATTACACTCTTTCCACGGGTTCTGCGCGCGGCCAATTACTACCGTGTCGGCATTGCGCCaga                                                                                                    <  1:1715413/100‑1 (MQ=255)
  cgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCaga                                                                                                    <  2:630574/100‑1 (MQ=255)
  cgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCaga                                                                                                    <  2:1961427/100‑1 (MQ=255)
   gcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCagag                                                                                                   <  1:85265/100‑1 (MQ=255)
     gccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGaa                                                                                                 >  1:1912132/1‑100 (MQ=255)
     gccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGaa                                                                                                 >  2:2269529/1‑100 (MQ=255)
      ccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGaaa                                                                                                >  2:2983462/1‑100 (MQ=255)
        aGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACa                                                                                              <  1:147117/100‑1 (MQ=255)
         ggCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAg                                                                                             <  1:1789846/100‑1 (MQ=255)
         ggCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAg                                                                                             >  2:1621887/1‑100 (MQ=255)
           cGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGaa                                                                                           >  2:3684680/1‑100 (MQ=255)
              aCGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAAcgc                                                                                        <  2:3061649/100‑1 (MQ=255)
               cGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGCCCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAAcgcg                                                                                       >  1:420318/1‑100 (MQ=255)
               cGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAAcgcg                                                                                       <  2:3341985/100‑1 (MQ=255)
                  tATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTg                                                                                    <  1:184711/100‑1 (MQ=255)
                    tcttctTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCg                                                                                  >  2:1094329/1‑100 (MQ=255)
                    tcttctTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCg                                                                                  <  1:2388517/100‑1 (MQ=255)
                     cttcttCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGt                                                                                 <  1:2836919/100‑1 (MQ=255)
                      ttcttcCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTg                                                                                <  1:924337/100‑1 (MQ=255)
                       tcttcCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTgg                                                                               >  1:655181/1‑100 (MQ=255)
                        cttcCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGc                                                                              >  2:2557848/1‑100 (MQ=255)
                        cttcCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGc                                                                              >  2:1810486/1‑100 (MQ=255)
                         ttcCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCg                                                                            <  1:1997529/100‑1 (MQ=255)
                           ccATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCAGTGCGCCAGAGAAACAGAACGCGCTGCGTGGCggg                                                                          <  1:1584744/100‑1 (MQ=255)
                               ccgccgGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCAtt                                                                      >  2:594563/1‑100 (MQ=255)
                                cgccgGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCGTTt                                                                     <  1:1415045‑M2/100‑2 (MQ=255)
                                   cgGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTtggc                                                                  >  1:1810477‑M2/1‑96 (MQ=255)
                                     ggTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGa                                                                <  1:3421607/100‑1 (MQ=255)
                                     ggTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGa                                                                <  2:3148048/100‑1 (MQ=255)
                                     ggTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGa                                                                <  2:749870/100‑1 (MQ=255)
                                      gaaTTCCAGTCTTTGCACGGGGTCGGCGCGCGACCAATTACTACCGTGTCGGCAGTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGa                                                                <  1:3119988/97‑1 (MQ=255)
                                      gTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGaa                                                               >  1:603429/1‑100 (MQ=255)
                                       tATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAaatgcccgccacgcagcgcgttctgtttctctggcgcaa                                                               <  1:1922962‑M1/100‑40 (MQ=255)
                                        aTTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGaaaa                                                             <  2:176031/100‑1 (MQ=255)
                                         ttACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGaaaaa                                                            <  2:2151726/100‑1 (MQ=255)
                                           acacTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATa                                                          <  1:1980087/100‑1 (MQ=255)
                                           acacTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATa                                                          >  2:1653921/1‑100 (MQ=255)
                                            cacTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATac                                                         <  2:2429327/100‑1 (MQ=255)
                                            cacTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCCGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGAAAAAAATac                                                         <  1:122392/100‑1 (MQ=255)
                                              ctctTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATacac                                                       >  2:558923/1‑100 (MQ=255)
                                                ctTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGCGGCGGGCATGTGACGAAAAATACActc                                                     >  1:936548/1‑100 (MQ=255)
                                                   tCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTc                                                  >  2:815191/1‑100 (MQ=255)
                                                     cACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCa                                                >  1:2258601/1‑100 (MQ=255)
                                                      aCGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCAc                                               >  2:2542810/1‑100 (MQ=255)
                                                      aCGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCACCAGAGAAACAGCACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCAc                                               >  2:1317709/1‑100 (MQ=255)
                                                       cgtgTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCAcc                                              <  2:1184385/97‑1 (MQ=255)
                                                       cGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCAcc                                              <  2:2993788/100‑1 (MQ=255)
                                                       cGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCAcc                                              <  2:1229959/100‑1 (MQ=255)
                                                        gggTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCg                                             >  1:3568405/1‑100 (MQ=255)
                                                          gTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGcc                                           <  2:1910737/100‑1 (MQ=255)
                                                          gTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGACAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGcc                                           >  1:95950/1‑100 (MQ=255)
                                                            tCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAg                                         >  2:2549118/1‑100 (MQ=255)
                                                             cTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAgg                                        >  1:3658772/1‑100 (MQ=255)
                                                              tGCGCTCGACCAATTAGTACCGTGTCGGCATTGCGCCAGAGAAACAGACCGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGt                                       <  1:2588034/100‑1 (MQ=255)
                                                              tGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGt                                       >  2:2777398/1‑100 (MQ=255)
                                                               gcgcgcGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAACAATACGCTCTTCCACGGCCGGGtt                                      >  1:2393723/1‑100 (MQ=255)
                                                               gcgcgcGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTAGGAGAAAAATACACTCTTCCACCGCCAGGtt                                      <  1:1569644/100‑1 (MQ=255)
                                                                cgcgcgACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTa                                     >  1:445412/1‑100 (MQ=255)
                                                                  cgcgACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTaaa                                   >  1:1476296/1‑100 (MQ=255)
                                                                  cgcgACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTaaa                                   >  1:1119616/1‑100 (MQ=255)
                                                                    cgACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAAcc                                 >  2:3448474/1‑100 (MQ=255)
                                                                        cAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACgg                             <  2:2658306/100‑1 (MQ=255)
                                                                        cAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACgg                             <  2:16790/100‑1 (MQ=255)
                                                                        cAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACgg                             >  2:3239004/1‑100 (MQ=255)
                                                                          aTTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGt                           >  2:3814261/1‑100 (MQ=255)
                                                                             actacCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGt                        <  1:2550287/100‑1 (MQ=255)
                                                                             actacCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGt                        >  2:3563806/1‑100 (MQ=255)
                                                                              ctacCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTa                       <  2:3611458/100‑1 (MQ=255)
                                                                              ctacCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTa                       >  1:2037244/1‑100 (MQ=255)
                                                                                acCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAag                     >  2:1773489/1‑100 (MQ=255)
                                                                                acCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAag                     <  1:2194267/100‑1 (MQ=255)
                                                                                  cGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAagag                   <  2:3607310/100‑1 (MQ=255)
                                                                                  cGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAagag                   <  2:3284949/100‑1 (MQ=255)
                                                                                  cGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAagag                   <  1:2973710/100‑1 (MQ=255)
                                                                                    tgtCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTc                 >  2:1229753/1‑100 (MQ=255)
                                                                                     gtCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCa                >  2:514608/1‑100 (MQ=255)
                                                                                     gtCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCa                <  2:2722930/100‑1 (MQ=255)
                                                                                     gtCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCa                >  2:1316797/1‑100 (MQ=255)
                                                                                      tcagCATTGCGCCAGAGAAGTCAAACACGCTGCTGGCTGGGCATTTTACGAAAAATACACTCTTCCACGGACGGTTTAAACCACgcatta                         >  1:3118206/4‑85 (MQ=255)
                                                                                      tCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCag               <  2:2490229/100‑1 (MQ=255)
                                                                                        ggCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCagag             <  2:3493615/100‑1 (MQ=255)
                                                                                         gCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTtggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgta            <  2:687680‑M2/100‑59 (MQ=255)
                                                                                         gCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAgaga            >  2:463564/1‑100 (MQ=255)
                                                                                         gCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAgaga            <  1:744755/100‑1 (MQ=255)
                                                                                          cATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTtggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaa           <  1:943736‑M2/100‑60 (MQ=255)
                                                                                          cATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGAt           >  2:3202973/1‑100 (MQ=255)
                                                                                           aTTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTtggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaat          <  1:1605203‑M2/100‑61 (MQ=255)
                                                                                           aTTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATg          <  2:1468698/100‑1 (MQ=255)
                                                                                           aTTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATg          <  2:3018995/100‑1 (MQ=255)
                                                                                                 ccAaatgcccgccacgcagcgcgttctgtttctctggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaatacccgg     <  2:705273‑M1/100‑98 (MQ=255)
                                                                                                  cAaatgcccgccacgcagcgcgttctgtttctctggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaatacccggc    >  2:3059962‑M1/1‑2 (MQ=255)
                                                                                                  cAaatgcccgccacgcagcgcgttctgtttctctggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaatacccggc    >  2:856308‑M1/1‑2 (MQ=255)
                                                                                                  cAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGc   >  1:339927/1‑100 (MQ=255)
                                                                                                   agagAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAggag  <  2:883939/100‑3 (MQ=255)
                                                                                                   aaatgcccgccacgcagcgcgttctgtttctctggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaatacccggcg   >  1:3530819‑M1/1‑1 (MQ=255)
                                                                                                   |                                                                                                    
GCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCG  >  NC_000913/4623907‑4624105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.