New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4634391 =130 (0.960)7 (0.060) 6/164 NT 5.7% coding (595/648 nt) ytjC phosphatase
?NC_000913 4634423 = 114 (0.910)coding (627/648 nt) ytjC phosphatase
Rejected: Frequency below cutoff threshold.

Only 100 of 170 total aligned reads displayed.

GCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGA  >  NC_000913/4634292‑4634489
                                                                                                   |                                                                                                  
tactacccggcagaagatgccaaagcgggagatcgcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatg                                                                                                    >  2:3214888‑M1/100‑100 (MQ=255)
tactacccggcagaagatgccaaagcgggagatcgcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatg                                                                                                    >  2:3215831‑M1/100‑100 (MQ=255)
tactacccggcagaagatgccaaagcgggagatcgcccaattaatctacgctgtgaactgctgattccgatccgtcgctaacgctgcagctcatctaatg                                                                                                    >  1:2213527‑M1/100‑100 (MQ=255)
  ctacccggcagaagatgccaaagcgggagatcgcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCa                                                                                                  <  1:67446‑M1/3‑1 (MQ=255)
   tacccgtcagaagatgccaaagagggatgtcgcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCa                                                                                                  >  1:1988811‑M1/97‑99 (MQ=255)
   tacccggcagaagatgccaaagcgggagatcgcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAg                                                                                                 <  1:547696‑M1/4‑1 (MQ=255)
    gggCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAgg                                                                                                <  1:796132/100‑1 (MQ=255)
     ggCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAggg                                                                                               >  2:1533688/1‑100 (MQ=255)
     ggCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAggg                                                                                               >  2:1095912/1‑100 (MQ=255)
     cccggcagaagatgccaaagcgggagatcgcccaattaatctacgctgtgcactgctgattgcgatccgtcgttaacgctgcagctcatctaatGCAgg                                                                                                <  1:3156122‑M1/5‑1 (MQ=255)
      gCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAgggg                                                                                              <  1:1211015/100‑1 (MQ=255)
      gCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAgggg                                                                                              <  1:2456598/100‑1 (MQ=255)
      ccggcagaagatgccaaagcgggagatcgcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAgggg                                                                                              >  2:1930028‑M1/94‑100 (MQ=255)
      ccggcagaagatgccaaagcgggagatcgcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAgggg                                                                                              >  2:2126578‑M1/94‑100 (MQ=255)
      ccggcagaagatgccaaagcgggagatcgcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAgggg                                                                                              >  1:3796380‑M1/94‑100 (MQ=255)
          agCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACAt                                                                                          >  2:2270670/1‑100 (MQ=255)
           gcgcCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACAtc                                                                                         <  1:2829023/100‑1 (MQ=255)
            cgccgcTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACAtct                                                                                        <  2:2835658/100‑1 (MQ=255)
                gcTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCa                                                                                    <  2:742271/100‑1 (MQ=255)
                gcTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCa                                                                                    <  1:963093/100‑1 (MQ=255)
                    cgctCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCtn                                                                                <  1:1759907/97‑2 (MQ=255)
                     cGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTgg                                                                               <  2:3025792/100‑1 (MQ=255)
                     cGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTgg                                                                               >  2:3692396/1‑100 (MQ=255)
                      gTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGa                                                                              <  1:486764/100‑1 (MQ=255)
                      gTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGa                                                                              <  1:2269677/100‑1 (MQ=255)
                        cTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTAGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACg                                                                            <  1:2086829/100‑1 (MQ=255)
                         tGCGTAACTGTTCTGTTTCGCGCTTGGATTATCAGTAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACg                                                                            <  1:3456871/99‑1 (MQ=255)
                          gCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGcc                                                                          >  1:1722709/1‑100 (MQ=255)
                           cGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGccc                                                                         >  2:2081129/1‑100 (MQ=255)
                           cGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGccc                                                                         >  1:1282557/1‑100 (MQ=255)
                           cGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCATGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGcc                                                                          >  1:3195110/1‑99 (MQ=255)
                              aaCTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTg                                                                      <  2:1741055/100‑1 (MQ=255)
                               atcgcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAGGGGACATCTCGCATCTGGACGCCCCTGc                                                                     >  2:1245863‑M1/69‑100 (MQ=255)
                               atcgcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAGGGGACATCTCGCATCTGGACGCCCCTGc                                                                     >  1:2018115‑M1/69‑100 (MQ=255)
                               aCTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGc                                                                     <  2:2703906/100‑1 (MQ=255)
                                cTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCa                                                                    >  1:3361841/1‑100 (MQ=255)
                                cTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCa                                                                    >  1:1846178/1‑100 (MQ=255)
                                cTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCa                                                                    >  1:2422398/1‑100 (MQ=255)
                                cTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCa                                                                    >  2:2745627/1‑100 (MQ=255)
                                  gTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCAtt                                                                  <  2:2153022/100‑1 (MQ=255)
                                  gTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCAtt                                                                  >  2:1220927/1‑100 (MQ=255)
                                  gTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCAtt                                                                  >  2:147389/1‑100 (MQ=255)
                                  gTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCAtt                                                                  >  1:3002380/1‑100 (MQ=255)
                                   ttCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTa                                                                 <  1:286069/100‑1 (MQ=255)
                                   cccaattaatctacgctgtgaactgctgattccgatccgtccttaacgctgcagctcatctaatGCAGGGGACATCTCGCATCTGGACGCCCCTGCAt                                                                   >  1:3544835‑M1/65‑98 (MQ=255)
                                    tCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAg                                                                >  2:761380/1‑100 (MQ=255)
                                    tCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCGGCATTAg                                                                <  2:1999101/100‑1 (MQ=255)
                                     cTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGa                                                               <  2:1289419/100‑1 (MQ=255)
                                     cTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGa                                                               >  1:2510944/1‑100 (MQ=255)
                                      tATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGAt                                                              <  2:436671/100‑1 (MQ=255)
                                       aTTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATg                                                             <  2:354713/100‑1 (MQ=255)
                                         ttCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAg                                                           <  2:471227/100‑1 (MQ=255)
                                           cgcgcgTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCt                                                         >  2:3299794/1‑100 (MQ=255)
                                            gcgcgTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTg                                                        <  2:3575502/100‑1 (MQ=255)
                                             cgcgTGGATTATCAGGAAAGGCTGTGGCTGGCGTCTGGCTGGGTCGTTGAGACCGCGGGGGACATCTCGAATCTGGACGCCCCTGCATTAGATGAGCTGc                                                       <  2:3238864/100‑1 (MQ=255)
                                               cgTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAg                                                     >  2:643274/1‑100 (MQ=255)
                                                  ggATTATCAGGAAAGCCTGTGGCTGGCGTCTGGTTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGt                                                  >  1:377744/1‑100 (MQ=255)
                                                   gATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGtt                                                 <  1:1388147/100‑1 (MQ=255)
                                                    aTTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTa                                                >  2:3547969/1‑100 (MQ=255)
                                                     ttATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTaa                                               >  2:935625/1‑100 (MQ=255)
                                                       aTCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCCTTAGATGAGCTGCAGCGTTAac                                              >  1:1477647/1‑99 (MQ=255)
                                                       aTCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacg                                             <  2:2245704/100‑1 (MQ=255)
                                                       aTCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacg                                             >  1:3721137/1‑100 (MQ=255)
                                                         cAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacgac                                           >  2:28133/1‑100 (MQ=255)
                                                          aGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCAGCAGCGTTAacgacg                                          >  2:3757048/1‑100 (MQ=255)
                                                           ggAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACgg                                         >  1:2877943/1‑100 (MQ=255)
                                                              aaGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATc                                      <  1:1076185/100‑1 (MQ=255)
                                                              aaGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATc                                      >  2:1309998/1‑100 (MQ=255)
                                                                gCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCgg                                    >  2:3749061/1‑100 (MQ=255)
                                                                  cTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTCACGACGGAtag                                     >  1:1507454/1‑95 (MQ=255)
                                                                   tgtgGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAAt                                 >  1:1327038/1‑100 (MQ=255)
                                                                     tggctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATca                               >  2:547702/1‑100 (MQ=255)
                                                                      ggctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATcag                              >  2:3500958/1‑100 (MQ=255)
                                                                       gctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATcagc                             <  1:1282772/100‑1 (MQ=255)
                                                                        ctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCGCCTGCATTAGATGAGCTGCAGCGTTACCGACGGATCGGACTcagc                             <  1:3429331/99‑1 (MQ=255)
                                                                             gTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTca                       >  1:2858773/1‑100 (MQ=255)
                                                                              tCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTcan                      <  1:1094081/100‑2 (MQ=255)
                                                                              tCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTcac                      <  2:1063869/100‑1 (MQ=255)
                                                                                tggctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAg                    <  2:251228/100‑1 (MQ=255)
                                                                                tggctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAg                    <  1:2759061/100‑1 (MQ=255)
                                                                                 ggctggGTCGTTGAAACCGCAGGGGACATCTCGCCTCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCATAGc                   >  1:2630720/1‑100 (MQ=255)
                                                                                  gctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCg                  >  2:2897921/1‑100 (MQ=255)
                                                                                   ctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGt                 >  1:443067/1‑100 (MQ=255)
                                                                                      ggTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGa              <  2:2351562/100‑1 (MQ=255)
                                                                                       gTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGAt             >  2:2452519/1‑100 (MQ=255)
                                                                                       gTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGAt             <  2:1391412/100‑1 (MQ=255)
                                                                                       gTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGAt             <  1:220835/100‑1 (MQ=255)
                                                                                         cGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTa           >  2:2622779/1‑100 (MQ=255)
                                                                                          gTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTaa          >  2:1343692/1‑100 (MQ=255)
                                                                                           ttttagccGCAGGGGACATCTCGCATCTTGACGCCCCTGCATTAGCTGAGCTGCAGCGTTAACGACGTCTCGGAATCAGCAGTTCACAGCGTAGATTa           <  1:2779569/92‑1 (MQ=255)
                                                                                            tGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGCTCGGAATCAGCAGTTCACAGCGTAGATTAAtt        >  1:1436543/1‑100 (MQ=255)
                                                                                             gAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTg       >  2:2660587/1‑100 (MQ=255)
                                                                                               aaCCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTggg     <  2:253319/100‑1 (MQ=255)
                                                                                               aaCCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTggg     <  1:643266/100‑1 (MQ=255)
                                                                                               aaCCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTggg     >  1:496875/1‑100 (MQ=255)
                                                                                                aCCGCAGGGTACCTCTCGCATCTGAACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAAtt        <  2:2958432/96‑1 (MQ=255)
                                                                                                 ccGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCg   >  2:3338984/1‑100 (MQ=255)
                                                                                                 ccGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCg   >  1:909221/1‑100 (MQ=255)
                                                                                                 ccGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCg   >  2:870350/1‑100 (MQ=255)
                                                                                                  cGCAGGGGACGTCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGa  <  2:2379526/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGA  >  NC_000913/4634292‑4634489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.