BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3281702 =	NA (NA)	8 (0.060)	4/164	NT	NA	noncoding (1/82 nt)	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3281734 =	NA (NA)	8 (0.060)	4/164	NT	NA	noncoding (33/82 nt)	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 140 total aligned reads displayed.

CCTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGTT  >  NC_000913/3281635‑3281833

ccTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGAcc                                                                                                     >  2:2553714/1‑100 (MQ=255)

 cTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGAcc                                                                                                     >  2:3520820/1‑99 (MQ=255)

   ttATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTAc                                                                                                  <  2:2013747/100‑1 (MQ=255)

   ttATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTAc                                                                                                  <  2:2922740/100‑1 (MQ=255)

      ttGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGATGCTAACGCGTCTTATCCGACCTACAGt                                                                                               >  1:599587/1‑100 (MQ=255)

       tGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGtt                                                                                              <  2:855278/100‑1 (MQ=255)

       tGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGtt                                                                                              >  2:3225189/1‑100 (MQ=255)

        gggCCTTCACTTCCCGCGTGAGGCCTGTATTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGAACTACAGt                                                                                               <  1:1708182/98‑1 (MQ=37)

        gggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTg                                                                                             >  2:1755214/1‑100 (MQ=255)

        gggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTg                                                                                             <  1:1794977/100‑1 (MQ=255)

        gggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTg                                                                                             >  1:825125/1‑100 (MQ=255)

          gCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGt                                                                                           >  2:205350/1‑100 (MQ=255)

           ccTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTg                                                                                          >  2:3322980/1‑100 (MQ=255)

           ccTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTg                                                                                          <  2:1990646/100‑1 (MQ=255)

             ttCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGAc                                                                                        <  2:3224017/100‑1 (MQ=255)

             ttCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGAc                                                                                        >  1:2557323/1‑100 (MQ=255)

             ttCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGAc                                                                                        <  1:1502260/100‑1 (MQ=255)

                 cTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCa                                                                                    <  2:3289744/100‑1 (MQ=255)

                 cTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCa                                                                                    <  2:3383666/100‑1 (MQ=255)

                 cTTCCCCCGTAAGGCCTTTCTTTTTCTTTCATTATGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTAGGTGACCGCa                                                                                    >  1:2501894/1‑100 (MQ=255)

                      cccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGcc                                                                               >  1:358715/1‑100 (MQ=255)

                      cccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGcc                                                                               <  2:1989112/100‑1 (MQ=255)

                       ccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCg                                                                              >  2:3320447/1‑100 (MQ=255)

                           aaGGCCTTTCTTTTTCTTTCGTTATGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGCCCTACAGTTGGTGACCGCAAGGCCGGATa                                                                          <  2:1195854/100‑1 (MQ=255)

                              caaacgctttatccggccttgcggtcaccaactgtaggtcggataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGGCCGGATaaa                                                                        >  1:1174773‑M2/70‑99 (MQ=255)

                               ccTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGc                                                                      <  2:2469918/100‑1 (MQ=255)

                               ccTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGc                                                                      >  1:10731/1‑100 (MQ=255)

                                ctttctttTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCg                                                                     >  2:2429655/1‑100 (MQ=255)

                                 tttctttttcttTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGt                                                                    >  2:3515103/1‑100 (MQ=255)

                                  ttctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGtt                                                                   <  1:2152924/100‑1 (MQ=255)

                                   tctttttctttCGTTTTGATCTGTGCAGCGGTGTCGTATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGttt                                                                  >  1:2850950/1‑100 (MQ=255)

                                   tctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGttt                                                                  >  2:3447875/1‑100 (MQ=255)

                                    ctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTg                                                                 <  1:3800560/100‑1 (MQ=255)

                                     tttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTgc                                                                >  2:800547/1‑100 (MQ=255)

                                     tttatccggccttgcggtcaccaactgtagGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTg                                                                 >  1:1174773‑M1/31‑99 (MQ=255)

                                      ttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTgcg                                                               <  1:12534/100‑1 (MQ=255)

                                      ttttctttCGTTTTGATCTGTGCAGCGGTGTAGGATGCGACGCTAACGCGTCTTATCCGATCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTgcg                                                               <  1:766898/100‑1 (MQ=255)

                                         tctttcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGcgccg                                                            <  1:2700679/100‑1 (MQ=255)

                                          ctttcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGcgccgc                                                           >  1:892567/1‑100 (MQ=255)

                                           tttcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGcgccg                                                            >  1:287428/1‑98 (MQ=255)

                                              cGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATcc                                                       >  2:3446057/1‑100 (MQ=255)

                                               gTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACATTTCGTGACCACAAGGCCGGATAAAGCGTTTGCGCCGCATCCa                                                      >  1:2675282/1‑100 (MQ=255)

                                               gTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCa                                                      >  1:3312449/1‑100 (MQ=255)

                                               gTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCa                                                      >  1:866820/1‑100 (MQ=255)

                                               gTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTGGCGCCGCATCCa                                                      >  1:3316896/1‑100 (MQ=255)

                                                ttttGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAg                                                     >  2:3057843/1‑100 (MQ=255)

                                                 tttGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGc                                                    <  1:3332554/100‑1 (MQ=255)

                                                  ttGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCa                                                   <  1:1044534/100‑1 (MQ=255)

                                                   tGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAg                                                     >  1:404242/1‑97 (MQ=255)

                                                    gATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAAt                                                 >  2:1696571/1‑100 (MQ=255)

                                                    gATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAAt                                                 >  2:1697462/1‑100 (MQ=255)

                                                     aTCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACAGCAAGGCCGGATAAAGCGTGTGCGCCGCATCCAGCAAt                                                 >  2:518128/1‑99 (MQ=255)

                                                        tgtgCGGCGTTGTCGGATGCGTCGCTAACGCGTCTGATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCt                                             <  1:3628870/100‑1 (MQ=39)

                                                        tgtgCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCt                                             >  2:2713522/1‑100 (MQ=255)

                                                        tgtgCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCt                                             >  2:1310646/1‑100 (MQ=255)

                                                        tgtgCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCt                                             >  1:2798636/1‑100 (MQ=255)

                                                         gtgCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtt                                            >  2:3662037/1‑100 (MQ=255)

                                                         gtgCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCACtt                                            >  2:2665928/1‑100 (MQ=255)

                                                           gCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGTCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtttt                                          >  2:1737850/1‑100 (MQ=255)

                                                           gCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtttt                                          >  2:441783/1‑100 (MQ=255)

                                                           gCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCACAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtttt                                          >  1:2228630/1‑100 (MQ=255)

                                                             aGCGGTGTCGGAGGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTg                                         <  1:1659897/99‑1 (MQ=255)

                                                              gCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCt                                       >  1:3405892/1‑100 (MQ=255)

                                                                ggTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTc                                     <  1:1248126/100‑1 (MQ=255)

                                                                ggTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTc                                     >  2:256055/1‑100 (MQ=255)

                                                                 gtgtCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTcc                                    <  2:227846/100‑1 (MQ=255)

                                                                   gtcggataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGTCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCtt                                  >  1:2744780‑M2/33‑100 (MQ=255)

                                                                   gtcggataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCtt                                  >  1:139090‑M2/33‑100 (MQ=255)

                                                                   GTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCtt                                  <  1:600039‑M1/100‑1 (MQ=255)

                                                                   GTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGGTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCtt                                  <  1:632296‑M1/100‑1 (MQ=255)

                                                                     cGGATGCGACGCTAACGCGTCATATCCGACATACAGTTGGTGACCGCAAGGCCGGACAAAGCGTTTACGCCGCATCCAGCAATCCCTTTTGCTTACTTTa                                >  1:2433308/1‑100 (MQ=38)

                                                                     CGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTa                                >  2:3048769‑M1/1‑100 (MQ=255)

                                                                     CGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTa                                <  1:455935‑M1/100‑1 (MQ=255)

                                                                     CGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTa                                <  2:1302538‑M1/100‑1 (MQ=255)

                                                                      ggataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAt                               >  1:1036285‑M2/30‑100 (MQ=255)

                                                                       gataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtc                              >  2:2646650‑M2/29‑100 (MQ=255)

                                                                       GATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATc                              <  2:195061‑M1/100‑1 (MQ=255)

                                                                       GATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATc                              <  1:796242‑M1/100‑1 (MQ=255)

                                                                         TGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCtt                            <  2:862931‑M1/100‑1 (MQ=255)

                                                                            gACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttc                         >  2:1008760/1‑100 (MQ=255)

                                                                              cGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttctt                       >  1:954508/1‑100 (MQ=255)

                                                                                 tAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCa                    <  2:1381743/100‑1 (MQ=255)

                                                                                  aaCGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCaa                   <  1:222264/100‑1 (MQ=255)

                                                                                  aaCGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCa                    <  1:3097767/99‑1 (MQ=255)

                                                                                    cgcgTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACg                 >  2:2304580/1‑100 (MQ=255)

                                                                                    cgcgTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACg                 >  2:2184086/1‑100 (MQ=255)

                                                                                     gcgTCTTATCCGACGTTCAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACg                 <  1:512825/99‑1 (MQ=255)

                                                                                     gcgTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGa                <  1:1057365/100‑1 (MQ=255)

                                                                                      cgTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGAt               <  2:684183/100‑1 (MQ=255)

                                                                                       gTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATc              <  2:3385449/100‑1 (MQ=255)

                                                                                       gTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATc              >  2:3476765/1‑100 (MQ=255)

                                                                                       gTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATc              <  1:1484360/100‑1 (MQ=255)

                                                                                       gTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATc              <  2:796250/100‑1 (MQ=255)

                                                                                        tCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATca             <  1:1830527/100‑1 (MQ=255)

                                                                                         cTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATcac            >  2:174848/1‑100 (MQ=255)

                                                                                            atccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACaa          >  1:1169914‑M2/8‑99 (MQ=255)

                                                                                            atccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTATTTCAACGATCACaa          >  2:3747421‑M2/8‑99 (MQ=255)

                                                                                               cgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAAttt      >  2:1408106‑M2/5‑100 (MQ=255)

                                                                                                 acCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCg    >  1:1029110‑M2/3‑100 (MQ=255)

                                                                                                  cCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGt   <  2:573112‑M2/99‑1 (MQ=255)

CCTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGTT  >  NC_000913/3281635‑3281833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.