New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3336878 =NA (NA)10 (0.080) 7/168 NT NA intergenic (‑75/+85) ibaG/mlaB acid stress protein; putative BolA family transcriptional regulator/ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component
?NC_000913 3336905 = NA (NA)intergenic (‑102/+58) ibaG/mlaB acid stress protein; putative BolA family transcriptional regulator/ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component

Only 100 of 168 total aligned reads displayed.

GATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTT  >  NC_000913/3336806‑3337001
                                                                                                   |                                                                                                
gATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTc                                                                                                  >  2:1367527/1‑100 (MQ=255)
 tctgcctcgttaaattttttcagcccggacatggcgttaaccgcctgtccggcaaacctgcctgcaattcgAGCCTCGCTGAGAAATCAGACAAGGCTc                                                                                                  >  1:688638‑M1/72‑99 (MQ=255)
  tCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGa                                                                                                >  2:865889/1‑100 (MQ=255)
   cTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGa                                                                                                >  1:1260638/1‑99 (MQ=255)
   cTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGAc                                                                                               <  2:3326207/100‑1 (MQ=255)
   cTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGAc                                                                                               <  1:3780762/100‑1 (MQ=255)
   cTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGAc                                                                                               <  2:1993126/100‑1 (MQ=255)
    ttCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGAc                                                                                               <  1:2981222/99‑1 (MQ=255)
    ttCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACt                                                                                              >  1:18679/1‑100 (MQ=255)
    ttCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACt                                                                                              >  2:1318302/1‑100 (MQ=255)
     tCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACtt                                                                                             <  2:3194556/100‑1 (MQ=255)
     tCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACtt                                                                                             >  2:348562/1‑100 (MQ=255)
      cAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTg                                                                                            >  1:802250/1‑100 (MQ=255)
       aaTCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgc                                                                                           <  1:2645812/100‑1 (MQ=255)
        atcatcAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgca                                                                                          >  2:1854581/1‑100 (MQ=255)
          catcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcagg                                                                                        >  1:211772/1‑100 (MQ=255)
          catcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcagg                                                                                        >  2:317595/1‑100 (MQ=255)
           atcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATATTCATAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcaggc                                                                                       <  1:3800721/100‑1 (MQ=255)
           atcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcaggc                                                                                       >  1:1413086/1‑100 (MQ=255)
           atcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgca                                                                                          >  1:313421/1‑97 (MQ=255)
              acttAATAAACTAACGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTAGCTGATAAATCAGACAAGGCTCAACTTccagc                                                                                        >  1:548921/3‑95 (MQ=255)
              aGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGcaggcagg                                                                                    >  1:2157394/1‑100 (MQ=255)
              aGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGcaggcagg                                                                                    >  2:54004/1‑100 (MQ=255)
              aGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGcaggcagg                                                                                    >  1:1666977/1‑100 (MQ=255)
              aGTTAATAAACAAGAGAAACATCTTAGAGCAAAGTTGCGCTGGAAAAAATAAGAAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGcaggcagg                                                                                    <  1:1228328/100‑1 (MQ=255)
                 taataaACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGttt                                                                                 >  2:2388929/1‑100 (MQ=255)
                 taataaACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGttt                                                                                 >  1:288834/1‑100 (MQ=255)
                    taaACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGcc                                                                              <  1:127521/100‑1 (MQ=255)
                    taaACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGcc                                                                              <  2:3437364/100‑1 (MQ=255)
                     aaaCCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGAAAAAAAAAAAAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCg                                                                             <  1:3074978/100‑1 (MQ=255)
                        ccAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGAc                                                                          <  1:67827/100‑1 (MQ=255)
                          aggcaaaCATCTTAGAGCAAATTTACGCTAAAAAAAAAAAAAAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCgg                                                                            <  1:3143175/92‑1 (MQ=255)
                           gCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAgg                                                                       >  2:3283889/1‑100 (MQ=255)
                            cGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGc                                                                      >  2:2392317/1‑100 (MQ=255)
                             gAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCg                                                                     <  2:2792046/100‑1 (MQ=255)
                              aaaCATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCgg                                                                    <  2:414080/100‑1 (MQ=255)
                               aaCATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGt                                                                   >  2:1879889/1‑100 (MQ=255)
                               aaCATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGt                                                                   <  2:471631/100‑1 (MQ=255)
                                tggcgttaaccgcctgtccggccaacctgcctgcaagtcgagccttgtctggtttatcagcgaggctCGACTTGCAGGCAGGTTTGCCTGACAGGc                                                                      >  1:1055540‑M2/68‑96 (MQ=255)
                                 cATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTa                                                                 >  1:485340/1‑100 (MQ=255)
                                   tCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAAc                                                               >  2:1723317/1‑100 (MQ=255)
                                   tCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAAc                                                               >  2:1428160/1‑100 (MQ=255)
                                     ttAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGc                                                             <  2:2421644/100‑1 (MQ=255)
                                      tAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGcc                                                            <  2:182481/100‑1 (MQ=255)
                                        gagCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCat                                                          >  1:3604936/1‑100 (MQ=255)
                                        gagCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCat                                                          >  2:741584/1‑100 (MQ=255)
                                        gagCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCat                                                          <  1:430603/100‑1 (MQ=255)
                                           gcctgtcaggcaaacctgcctgcaagtcgAGCCTCGCTGATAAACCAGACAAGGCTCGACTTGCAGGCAGGTTGGCCGGACAGGCGGTTAACGCCa                                                           >  1:1055540‑M1/30‑96 (MQ=255)
                                              aGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCgg                                                    <  2:3354080/100‑1 (MQ=255)
                                              aGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCgg                                                    <  1:3199584/100‑1 (MQ=255)
                                               gTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCAGATCAGGc                                                   >  2:1837658/1‑100 (MQ=255)
                                                  gcgcTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTg                                                >  2:2187606/1‑100 (MQ=255)
                                                  gcgcTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTg                                                >  2:1886636/1‑100 (MQ=255)
                                                  gcgcGGGCATAAATAAGCACAATGCCGCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGcc                                                  <  1:1641220/98‑1 (MQ=255)
                                                   cgcTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGa                                               >  2:2634996/1‑100 (MQ=255)
                                                   cgcTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGa                                               >  2:2509079/1‑100 (MQ=255)
                                                   cgcTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGa                                               >  1:278675/1‑100 (MQ=255)
                                                      tGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaa                                            <  1:3414227/100‑1 (MQ=255)
                                                      tGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaa                                            <  1:54002/100‑1 (MQ=255)
                                                       ggCATAAGTAACCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaa                                           >  1:1994339/1‑100 (MQ=255)
                                                         cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                                         >  1:1356882/1‑100 (MQ=255)
                                                         cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                                         <  1:1323250/100‑1 (MQ=255)
                                                         cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                                         >  2:3767250/1‑100 (MQ=255)
                                                         cATAAAGAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                                         <  2:1538632/100‑1 (MQ=255)
                                                          ataaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAtt                                        <  1:655630/100‑1 (MQ=255)
                                                           taaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAtt                                        <  1:3417568/99‑1 (MQ=255)
                                                              ataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAAc                                    >  2:172444/1‑100 (MQ=255)
                                                               taaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACg                                   <  1:3792142/100‑1 (MQ=255)
                                                               taaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACg                                   >  1:1855534/1‑100 (MQ=255)
                                                                   cAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGc                               >  1:982870/1‑100 (MQ=255)
                                                                    gtcgagccttgtctgatttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGc                               >  1:1059918‑M2/32‑99 (MQ=255)
                                                                    gtcgagccttgtctgatttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCa                              >  2:3677475‑M2/32‑100 (MQ=255)
                                                                    aaaaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCa                              <  2:377512/100‑1 (MQ=255)
                                                                     aaaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAg                             <  2:911717/100‑1 (MQ=255)
                                                                        agccttgtctgatttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCCGAAc                          >  2:2907172‑M2/28‑100 (MQ=255)
                                                                        agccttgtctgatttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAAc                          >  1:1405327‑M2/28‑100 (MQ=255)
                                                                        agccttgtctgatttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAAc                          >  1:2980054‑M2/28‑100 (MQ=255)
                                                                         gccttgtctgatttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCagaaga                         >  1:2843803‑M2/27‑98 (MQ=255)
                                                                         GCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACa                         >  2:117773‑M1/1‑100 (MQ=255)
                                                                         GCCTCGCTGATAAATCAGACAAGGCTCGACTCGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACa                         <  1:1466806‑M1/100‑1 (MQ=255)
                                                                           CTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATc                       <  2:7725‑M1/100‑1 (MQ=255)
                                                                           CTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATc                       <  1:2188821‑M1/100‑1 (MQ=255)
                                                                            TCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCa                      >  1:1660250‑M1/1‑100 (MQ=255)
                                                                             cGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATcag                     <  2:2295739/100‑1 (MQ=255)
                                                                             cGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATcag                     <  2:3318066/100‑1 (MQ=255)
                                                                               tctgatttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATcagca                   <  2:2843817‑M2/80‑1 (MQ=255)
                                                                                 gATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAgg                 <  2:3727023/100‑1 (MQ=255)
                                                                                  aTAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGc                <  1:1180745/100‑1 (MQ=255)
                                                                                    tttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCaa              >  2:3093205‑M2/16‑100 (MQ=255)
                                                                                    aaaTCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCaa              >  2:1283178/1‑100 (MQ=255)
                                                                                     aaTCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCaaa             <  2:3387581/100‑1 (MQ=255)
                                                                                        cAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATta          <  1:461699/100‑1 (MQ=255)
                                                                                         aGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATtat         >  2:3713697/1‑100 (MQ=255)
                                                                                          gACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATtata        <  2:3125898/100‑1 (MQ=255)
                                                                                          gACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATtata        >  2:471733/1‑100 (MQ=255)
                                                                                           aCAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATAc       <  2:1863370/100‑1 (MQ=255)
                                                                                            cAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACa      <  2:2140340/100‑1 (MQ=255)
                                                                                             aaGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACaa     <  1:1795849/100‑1 (MQ=255)
                                                                                             aaGGCTAGAATTGCAGGCAGGTTGGCAGGACAGGCGGTTATCGCCATATCTGGCTTTAAATAATTTAACGAGGCAGAACCTCAGCAGGCAAATtatttag     <  1:1490673/100‑5 (MQ=255)
                                                                                              aggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAAt    >  1:1121493‑M2/6‑100 (MQ=255)
                                                                                                   |                                                                                                
GATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTT  >  NC_000913/3336806‑3337001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.