| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,185,470 | C→A | 18.0% | P41T (CCG→ACG) | rpoC → | RNA polymerase, beta prime subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,185,470 | 0 | C | A | 18.0% | 409.3 / 71.0 | 160 | P41T (CCG→ACG) | rpoC | RNA polymerase, beta prime subunit |
| Reads supporting (aligned to +/- strand): ref base C (60/71); new base A (14/15); total (74/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
Only 100 of 168 total aligned reads displayed.
CTGAAAGCGCAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGCCTGTGCGG > NC_000913/4185371‑4185567 | cTGAAAGCGCAGACTAAAACCGAAGAGATTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGc > 2:124693/1‑100 (MQ=255) tGAAAGCGCAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGcc < 1:3058871/100‑1 (MQ=255) gAAAGCGCAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCg > 2:1425274/1‑100 (MQ=255) gAAAGCGCAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCg < 1:1448161/100‑1 (MQ=255) aaaGCGCAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCgg < 2:3103446/100‑1 (MQ=255) aaaGCGCAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCATCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACgg < 1:918416/100‑1 (MQ=255) gcgcAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCGTCGCCAGACATGATCCGTTCATCGTCTCTGGGTCAAGTTTCAATGCCGGac > 1:97785/1‑98 (MQ=255) cgcAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAAc > 1:1561074/1‑100 (MQ=255) tctgACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAAcc < 2:1455266/97‑1 (MQ=255) cAGACTAAAACCGAATAGTTTGATGCTATCAAAATTGCTCTGGCTTCGCCAGACAGGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCa < 1:1487786/100‑1 (MQ=255) cAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCa < 2:1028550/100‑1 (MQ=255) cAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCa < 2:137552/100‑1 (MQ=255) gACTAAAACCGACGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATc > 2:2510685/1‑100 (MQ=255) aCTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCa < 1:415273/100‑1 (MQ=255) cTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCaa < 2:2263324/100‑1 (MQ=255) cTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCaa < 1:3709588/100‑1 (MQ=255) cTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCaa > 2:1388874/1‑100 (MQ=255) cTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCaa > 1:1029129/1‑100 (MQ=255) tAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAAc < 2:1999051/100‑1 (MQ=255) tAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAAc < 2:2716188/100‑1 (MQ=255) tAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAAc < 2:3376713/100‑1 (MQ=255) ccGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCg > 1:1332304/1‑100 (MQ=255) ccGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCg > 2:3670968/1‑100 (MQ=255) cGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCg < 2:535445/99‑1 (MQ=255) cGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGt > 1:625788/1‑100 (MQ=255) gAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGtn < 1:3007366/100‑2 (MQ=255) gAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTa < 1:18150/100‑1 (MQ=255) ttGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTc < 1:1389183/98‑1 (MQ=255) ttGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCaa > 2:2127876/1‑100 (MQ=255) ttGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCaa < 2:2415062/100‑1 (MQ=255) tGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCaaa < 2:1669403/100‑1 (MQ=255) tGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCaaa > 2:3471726/1‑100 (MQ=255) gATGCGATCAAAATTGGCCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCaaa < 1:281186/99‑1 (MQ=255) gATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAAc > 2:2197084/1‑100 (MQ=255) gATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAAc > 1:3714930/1‑100 (MQ=255) aTGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAAcc < 1:1004067/100‑1 (MQ=255) aTGCGATCAAAATTGCTCTGGCTTCGCCAGACATGACCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAAcc < 1:3495673/100‑1 (MQ=255) aTGCCATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAAc < 1:287718/99‑1 (MQ=255) gCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAg < 2:269748/100‑1 (MQ=255) gCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAg < 2:875510/100‑1 (MQ=255) gATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGaa > 2:2258559/1‑100 (MQ=255) gATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGaa > 2:816115/1‑100 (MQ=255) gATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGaa > 1:3614172/1‑100 (MQ=255) gATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGaa < 1:1097475/100‑1 (MQ=255) tCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACg < 1:1184592/100‑1 (MQ=255) cAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGt > 2:393575/1‑100 (MQ=255) aaaaTTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTg < 1:2907666/100‑1 (MQ=255) aaaTTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGa < 1:1863985/100‑1 (MQ=255) aaTTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGAc < 1:2789121/100‑1 (MQ=255) ttGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACgg < 2:3811212/100‑1 (MQ=255) ttGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACgg < 2:3542342/100‑1 (MQ=255) ctctGGGTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAAGCATCAACTACCGTACGTTCAAACCAGAACGTGACgg < 1:3217910/97‑1 (MQ=255) tctGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCtt < 1:457984/100‑1 (MQ=255) ctGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCttt > 2:337567/1‑100 (MQ=255) ggCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTc > 2:2891186/1‑100 (MQ=255) ggCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTc > 2:2058038/1‑100 (MQ=255) cTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTg > 2:133586/1‑100 (MQ=255) ttCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCNGGAANCCNTCAACTACNGTACGTTCAAACCAGAACGTGACGGCCTTTTCtn < 2:1872294/99‑2 (MQ=255) ttCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTgc > 1:2891311/1‑100 (MQ=255) tCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTgcg < 1:3522696/100‑1 (MQ=255) tCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTgcg < 2:2525764/100‑1 (MQ=255) gCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGcc > 2:3223009/1‑100 (MQ=255) ccAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGccc > 2:949004/1‑100 (MQ=255) ccAGACATGATCCGTTCATGGTCTTTCGATGTAGTTACAAAGCCGGAACCCATCAACTACCGTACGTTCAACCCAGAACGTGACGGCCTTTTCTgc > 1:972359/1‑96 (MQ=255) gACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTa < 1:3407626/100‑1 (MQ=255) gACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTa < 1:1687269/100‑1 (MQ=255) tGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCtt > 2:1956013/1‑100 (MQ=255) gATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCttt > 2:3112542/1‑100 (MQ=255) aTCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTg < 2:555230/100‑1 (MQ=255) tCCGTGCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTgg < 1:2971848/100‑1 (MQ=255) ccGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTggg < 2:729709/100‑1 (MQ=255) ccGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTggg < 2:2124591/100‑1 (MQ=255) ccGTTCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTggg < 2:2998351/100‑1 (MQ=255) cGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGc < 2:2620658/100‑1 (MQ=255) tCATGGTCTTTCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCgg > 2:2655323/1‑100 (MQ=255) tCATGGTCTTTCGATGAAGTTAAAAAGCCGGAAACCAGCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCgg > 1:2026700/1‑100 (MQ=255) cATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGt < 1:1572794/100‑1 (MQ=255) cATGGTCTTTAGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCGCGTATCTTTgggac > 1:3785476/1‑95 (MQ=255) aTGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTa < 2:594879/100‑1 (MQ=255) tGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTaa > 1:2042217/1‑100 (MQ=255) ggTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTaaa > 1:230949/1‑100 (MQ=255) gTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTaaaa > 2:288487/1‑100 (MQ=255) gTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTaaaa < 1:3302276/100‑1 (MQ=255) tcgttCGGTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAg < 1:3560146/97‑1 (MQ=255) tCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTa < 1:2515759/100‑1 (MQ=255) ggTGACGTTAAAAAGCCGGTAACCAACAACTACCGTACGTTCAAAACCGGTCGTGACGGCCTTTTCCGCGCCCGGAGCTTTGGTCCGGTAAAAGa < 1:3179406/95‑1 (MQ=255) gTGAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGa < 1:3170694/100‑1 (MQ=255) gAAGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGt < 2:3753851/100‑1 (MQ=255) aaGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTg < 1:1246023/100‑1 (MQ=255) aGTTAAAAAGCCGGAAACCATCAACTTCCGTACGTTCAAACCAGAACGTGACAGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGc < 1:2736117/100‑1 (MQ=255) aGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGAATCTTTGGGCCGGTAAAAGATTACGAGTGc > 2:974518/1‑100 (MQ=255) aGTTAAAAAGACGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGc > 1:1938587/1‑100 (MQ=255) gTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGcc < 1:2516757/100‑1 (MQ=255) gTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGcc > 1:2627420/1‑100 (MQ=255) gTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGcc > 1:542523/1‑100 (MQ=255) gTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGcc > 1:3002332/1‑100 (MQ=255) gTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGcc < 2:2873112/100‑1 (MQ=255) tAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGCCtg > 1:755993/1‑100 (MQ=255) aaaaaGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGCCtgt > 2:1602901/1‑100 (MQ=255) aGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGCCTGTGCgg < 1:563141/100‑1 (MQ=255) | CTGAAAGCGCAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGCCTGTGCGG > NC_000913/4185371‑4185567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |