Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 756,725 G→A 15.3% M273I (ATG→ATA sdhA → succinate dehydrogenase, flavoprotein subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913756,7250GA15.3% 402.7 / 52.2 163M273I (ATG→ATAsdhAsuccinate dehydrogenase, flavoprotein subunit
Reads supporting (aligned to +/- strand):  ref base G (69/68);  new base A (15/10);  total (84/79)
Fisher's exact test for biased strand distribution p-value = 3.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.19e-01

Only 100 of 166 total aligned reads displayed.

GTTCCACCCGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGAAGGTCGCGGCTGTGATGGTCCG  >  NC_000913/756626‑756824
                                                                                                    |                                                                                                   
gTTCCACCCGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATg                                                                                                     <  2:3014857/100‑1 (MQ=255)
  tCCACCCGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGa                                                                                                   >  1:2255071/1‑100 (MQ=255)
    gcccgcaCCGGCAATGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGc                                                                                                 >  2:535666/7‑100 (MQ=255)
    gcccgcaCCGGCAATGCCGGTCGGGTGGAACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGc                                                                                                 >  2:2171313/7‑100 (MQ=25)
    cACCCGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGc                                                                                                 >  2:2823577/1‑100 (MQ=255)
    cACCCGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGc                                                                                                 >  1:1290941/1‑100 (MQ=255)
     cccgcaCCGGCAATGCCGGTGCGGGCGTACTGGTCACCGCAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGc                                                                                                 >  1:724615/6‑99 (MQ=255)
     cccgcaCCGGCAATGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCg                                                                                                >  2:878408/6‑100 (MQ=255)
     aCCCGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCg                                                                                                >  1:152773/1‑100 (MQ=255)
      ccgcaCCGGCAATGCCGGTGCGGGCGTACTGATCACCGCAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCg                                                                                                >  1:1245771/5‑99 (MQ=255)
       ccGACCGGCATTGCGGGTGCGGGCGTACTGGTTACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATTGAGCGtt                                                                                              <  1:354090/100‑1 (MQ=255)
       ccGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCg                                                                                                <  1:1868301/98‑1 (MQ=255)
       ccGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGt                                                                                               <  1:2097467/99‑1 (MQ=255)
        cggccGGCATTGCCGGTGCGCGCGTACTGGTCACCGAATGTTGCGGTGGTGACGGCGGTTATCGGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTa                                                                                             <  1:1852188/97‑1 (MQ=255)
        cGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTa                                                                                             <  1:1006168/100‑1 (MQ=255)
         gACCGGCATTGCCGGTGCGGGCGTACTGGTCACGGGAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGGGTTa                                                                                             <  1:1757006/99‑1 (MQ=255)
         gACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTAt                                                                                            <  1:3811467/100‑1 (MQ=255)
           ccGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATgc                                                                                          <  2:2584255/100‑1 (MQ=255)
             ggCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGCGTTATgcgc                                                                                        >  2:959606/1‑100 (MQ=255)
              gCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTaagatcg                                                                                       >  1:3364547/1‑94 (MQ=255)
              gCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGCGTTATGCGcc                                                                                       <  1:3325731/100‑1 (MQ=255)
                aTTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGa                                                                                     >  2:2880201/1‑100 (MQ=255)
                  tGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAAc                                                                                   >  2:1519648/1‑100 (MQ=255)
                   gCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACg                                                                                  >  2:3494486/1‑100 (MQ=255)
                   gCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACg                                                                                  >  1:1970855/1‑100 (MQ=255)
                    ccGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGc                                                                                 >  2:2416475/1‑100 (MQ=255)
                    ccGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGc                                                                                 >  1:1750735/1‑100 (MQ=255)
                    ccGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGCGTTATGCGCCGAACGc                                                                                 <  1:3029002/100‑1 (MQ=255)
                     cGGTGCGGGCGTACTGGGCACCGAAGGTTGGCGGTGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGcc                                                                                <  2:3458948/100‑1 (MQ=255)
                      ggTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCa                                                                               <  1:2528966/100‑1 (MQ=255)
                        tGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCaaa                                                                             >  1:323891/1‑100 (MQ=255)
                          cGGGCGTCCTGGTGACCGAAGGCTGCCGTGGTGGAGGCGGTTAGCTGCTGAACAAACATGTCGAACGTTTTATGGAGGGTTATGCGCCGAACGCCAAAGa                                                                           <  1:1006242/100‑1 (MQ=255)
                            ggCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGAcc                                                                         >  2:2042827/1‑100 (MQ=255)
                            ggCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGAcc                                                                         <  1:1659267/100‑1 (MQ=255)
                                gTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTgg                                                                      >  2:960024/1‑100 (MQ=255)
                                 tACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGc                                                                     >  2:37814/1‑100 (MQ=255)
                                  aCTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCg                                                                    >  1:1339493/1‑100 (MQ=255)
                                  aCTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCg                                                                    <  1:551709/100‑1 (MQ=255)
                                   cTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCgg                                                                   <  2:1290319/100‑1 (MQ=255)
                                   cTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGCGTGATGCGCCGAACGCCAAAGACCTGGCg                                                                    <  1:562686/99‑1 (MQ=255)
                                    tGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCggg                                                                  <  2:370174/100‑1 (MQ=255)
                                    tGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCggg                                                                  <  1:365602/100‑1 (MQ=255)
                                    tGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGCGTTATGCGCCGAACGCCAAAGACCTGGCggg                                                                  <  2:235487/100‑1 (MQ=255)
                                     ggTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGc                                                                 >  1:264628/1‑100 (MQ=255)
                                       tCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCg                                                               <  1:2053959/100‑1 (MQ=255)
                                       tCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCg                                                               >  2:1132541/1‑100 (MQ=255)
                                        cACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGt                                                              >  2:966833/1‑100 (MQ=255)
                                        cACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGt                                                              >  1:3749920/1‑100 (MQ=255)
                                         aCCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTg                                                             >  1:2772708/1‑100 (MQ=255)
                                          gggAAGGTTGCCGTGGGGAAGGCGGGTATCTGGTGAACAAACATGGCGAGCGTGTTATGGGGTGTTATGCGCCGAACGGCAATGACCTGGCGGGcgg                                                               <  1:3145144/95‑3 (MQ=255)
                                          ccGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGa                                                            >  2:425200/1‑100 (MQ=255)
                                          ccGAAGGTTGCCGTGGTGAAGGCGGTTAGCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGa                                                            <  1:677349/100‑1 (MQ=255)
                                          ccGAAGGTTGACGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGTAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGa                                                            >  1:1139141/1‑100 (MQ=255)
                                           cGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTCGCGGGCCGTGAc                                                           <  2:2512991/100‑1 (MQ=255)
                                               ggTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTgg                                                       >  1:2431304/1‑100 (MQ=255)
                                               ggTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTgg                                                       <  2:1240096/100‑1 (MQ=255)
                                               ggTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTgg                                                       >  1:3451238/1‑100 (MQ=255)
                                               ggTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTgg                                                       >  1:1045379/1‑100 (MQ=255)
                                               ggTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACATTTTATGGAGCGTTATGCGCCGAACGTCAAAGACCTGGCGGGCCGTGagacgg                                                       >  1:1101407/1‑95 (MQ=255)
                                                gTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGt                                                      >  1:546552/1‑100 (MQ=255)
                                                 ttGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGtt                                                     <  1:1680399/100‑1 (MQ=255)
                                                  tGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTg                                                    <  2:2246181/100‑1 (MQ=255)
                                                    ccGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTgcg                                                  <  2:3119953/100‑1 (MQ=255)
                                                    ccGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTgcg                                                  >  2:449985/1‑100 (MQ=255)
                                                      gtggtgAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGcgcg                                                <  2:2379161/100‑1 (MQ=255)
                                                      gtggtgAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGcgcg                                                <  2:2837853/100‑1 (MQ=255)
                                                       tggtgAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGt                                               <  2:1054620/100‑1 (MQ=255)
                                                       tggtgAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGt                                               >  2:2827899/1‑100 (MQ=255)
                                                         gtgAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTc                                             <  1:2195112/100‑1 (MQ=255)
                                                         gtgAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTc                                             >  2:3304898/1‑100 (MQ=255)
                                                           gAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCca                                           <  2:3055915/100‑1 (MQ=255)
                                                             aGGCGGTTATCTGCTTAACATACATGGCGGAGGTTTTATGGAGCGTTTTGCGCCGAACGCCAACGCGCTGGCGGCCCGTGGCGTGGTTGCGAGTTCcatc                                         >  1:3039648/1‑100 (MQ=255)
                                                             aGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCcatc                                         >  2:3067019/1‑100 (MQ=255)
                                                              ggCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCcatca                                        >  1:3793991/1‑100 (MQ=255)
                                                              ggCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCcatca                                        <  1:1330195/100‑1 (MQ=255)
                                                                cGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATg                                      >  2:2079484/1‑100 (MQ=255)
                                                                 ggTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGa                                     <  1:3697009/100‑1 (MQ=255)
                                                                  gTTATCTGCTGAACAAACATGGCGAACGTTTTATAGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGAt                                    <  1:2637339/100‑1 (MQ=255)
                                                                   ttATCTGCTGAACAAACATGGCGAACGTTTTATAGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATc                                   <  2:2159756/100‑1 (MQ=255)
                                                                       ctgctgAACGAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGaaa                               <  1:2567672/100‑1 (MQ=255)
                                                                       ctgctgAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGagatcgg                               >  2:18413/1‑94 (MQ=255)
                                                                        tgctgAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAAt                              >  2:2677601/1‑100 (MQ=255)
                                                                        tgctgAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAAt                              >  1:1392441/1‑100 (MQ=255)
                                                                         gctgAACAAACATGGCGTACGTTTTATGGGGCGCTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATc                             <  1:2552874/100‑1 (MQ=255)
                                                                          ctgAACAAACATGGCGAACGTTTTATAGAGCGTTATGCGCCGAACGCCAAAGCCCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATcc                            <  2:1074833/100‑1 (MQ=255)
                                                                           tgAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCg                           <  2:1381247/100‑1 (MQ=255)
                                                                            ggacaaacaTGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGt                          >  2:2583626/3‑100 (MQ=255)
                                                                            gAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGt                          >  1:1818919/1‑100 (MQ=255)
                                                                            gAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGt                          >  2:3615532/1‑100 (MQ=255)
                                                                             aacaaacaTGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTg                         <  2:646938/100‑1 (MQ=255)
                                                                             aacaaacaTGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTg                         >  1:132171/1‑100 (MQ=255)
                                                                               caaacaTGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGaa                       <  2:578377/100‑1 (MQ=255)
                                                                               caaacaTGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGaa                       <  1:464006/100‑1 (MQ=255)
                                                                               caaacaTGGCGAACGTTTTATAGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGaa                       >  2:2584690/1‑100 (MQ=255)
                                                                                   caTGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGAAGGTc                   >  2:3527207/1‑100 (MQ=255)
                                                                                        cGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGAAGGTCGCGGc              <  2:3008218/100‑1 (MQ=255)
                                                                                          aaCGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGAAGGTCGCGGCtg            <  1:3519216/100‑1 (MQ=255)
                                                                                            cGTTTTATAGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGAAGGTCGCGGCtgtg          >  1:2055461/1‑100 (MQ=255)
                                                                                              ttttATAGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGAAGGTCGCGGCTGTGAt        <  2:2670078/100‑1 (MQ=255)
                                                                                                  aTGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGAAGGTCGCGGCTGTGATGGTc    >  2:1532964/1‑100 (MQ=255)
                                                                                                    |                                                                                                   
GTTCCACCCGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGAAGGTCGCGGCTGTGATGGTCCG  >  NC_000913/756626‑756824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: