| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,364,995 | T→G | 17.5% | intergenic (+16/+23) | nudI → / ← ais | nucleoside triphosphatase/putative LPS core heptose(II)‑phosphate phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,364,995 | 0 | T | G | 17.5% | 352.8 / 70.7 | 154 | intergenic (+16/+23) | nudI/ais | nucleoside triphosphatase/putative LPS core heptose(II)‑phosphate phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (71/54); new base G (11/16); total (82/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
Only 100 of 156 total aligned reads displayed.
GCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCAGATAATCA > NC_000913/2364896‑2365093 | gcgTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAt > 2:1690082/1‑100 (MQ=255) cgTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAtt > 1:1767280/1‑100 (MQ=255) gTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTa < 2:266672/100‑1 (MQ=255) tGGGTAAACCCTGAAGATCTTGTGCATTATTATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGCTCTTCTGTAACAATGATGACAGCCATTAc > 1:136539/1‑100 (MQ=255) tGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTAc > 1:489023/1‑100 (MQ=255) tGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTAc > 2:921796/1‑100 (MQ=255) ggTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTg > 1:964385/1‑100 (MQ=255) gTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTgg < 1:1464195/100‑1 (MQ=255) tAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTGTTCTGTAACAATGATGACAGCCATTACTGGc > 1:285790/1‑100 (MQ=255) tAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGc < 2:489029/100‑1 (MQ=255) tAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGc < 2:914941/100‑1 (MQ=255) tAAAACCTGAAGATCCAGTGCTTTATTATTTGAATGAAAAAAAAAAAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGc < 1:3294026/100‑1 (MQ=255) aaaCGTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTg < 1:2699948/100‑1 (MQ=255) aaaCCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTg > 2:2643441/1‑100 (MQ=255) aaCCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGt > 1:3045223/1‑100 (MQ=255) aaCCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAGTAATGGCTGt > 1:3266468/1‑100 (MQ=255) aCCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTc > 2:3330825/1‑100 (MQ=255) cTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAGTAATGGCTGTCat < 2:3730158/100‑2 (MQ=255) cTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAGTAATGGCTGTCat < 2:874618/100‑2 (MQ=255) tGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAGTAATGGCTGTCatc < 2:1776914/100‑3 (MQ=255) tGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAGTAATGGCTGTCatc < 1:1331527/100‑3 (MQ=255) gAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAACAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAGTAATGGCTGTCatca < 1:1885059/100‑4 (MQ=255) gAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGAt > 1:3081708/1‑100 (MQ=255) gAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGAt > 1:596141/1‑100 (MQ=255) gAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGAt < 1:302950/100‑1 (MQ=255) gAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAGTAATGGCTGTCatca < 1:951973/100‑4 (MQ=255) aaGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAGTAATGGCTGTCatcat < 2:3266486/100‑5 (MQ=39) gATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAGTAATGGCTGTCatcattg < 2:3270565/100‑7 (MQ=38) gATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCAGTAATGGCTGTCatcattg < 2:3547162/100‑7 (MQ=38) gATCGGGTGCATTATGATTTTAATGTCGCCACGCGAACAACGTTACGTTAGAAAGGTCTTCTGTAACAATGCTGACAGCCAGTAATGGCTGTCatc < 1:1876137/96‑3 (MQ=37) ctagTGCATTATGATTTGAATGTCTCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGaaaa < 1:3367460/97‑1 (MQ=255) gTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAAttt < 2:1137581/100‑1 (MQ=255) gCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAg > 2:2183192/1‑100 (MQ=255) cATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGt < 2:2533301/100‑1 (MQ=255) aTTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTg < 1:7054/100‑1 (MQ=255) ttATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTgg < 2:1821773/100‑1 (MQ=255) ttATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTgg < 1:437577/100‑1 (MQ=255) tttGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACg < 1:1019628/100‑1 (MQ=255) tttGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACg > 1:3543503/1‑100 (MQ=255) tttGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTAGTTAACg > 1:380839/1‑100 (MQ=255) aaTGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAAtt > 1:1598143/1‑100 (MQ=255) aTGTCGCCACCCGAAAAACGTTACGTTTGAACGGTCTTCTGTAACAATGATGACAGCCCTTACTTGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTc > 1:2819535/1‑100 (MQ=255) tGTCGCCACCCGAATAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCACTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTcc < 1:1690073/100‑1 (MQ=255) gTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTccc > 2:1779359/1‑100 (MQ=255) tCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTcccc < 1:1986332/100‑1 (MQ=255) cGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCa > 2:1897584/1‑100 (MQ=255) cGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCa > 1:837462/1‑100 (MQ=255) cGCCACCCGAAAAACGTTACGGTTGAAAGGTCTTCTGTAACAATGATGACAGCTATGACTGGCTGTAAGATTGAACATTTAGTGGTTATCGAATTaccc > 1:1315701/1‑99 (MQ=255) gCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCAt > 2:829522/1‑100 (MQ=255) cccGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAg > 2:1960389/1‑100 (MQ=255) ccGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGa > 1:911946/1‑100 (MQ=255) ccGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGa > 1:2443921/1‑100 (MQ=255) ccGAAAAACGTTACGTTTGAAAGGTCTGCTGTAACAATGATGACAGCCATTACTGGCTGCCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAg > 1:174197/1‑99 (MQ=255) cGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGAt < 2:2240320/100‑1 (MQ=255) gAAAAACGTTACGTTTGAAAGGTCCTCTATAACAAAGATTACAACCATTACTGCCTCTCAAATTGCAAATTTAATGGTTAACGAATTACCCATCGAGATa > 1:1749518/1‑100 (MQ=255) gAAAAAAGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATa < 2:172833/100‑1 (MQ=255) aaaaCGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATaaa < 1:654212/100‑1 (MQ=255) gttacgttTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTg > 2:2629988/1‑100 (MQ=255) cgttTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCtt > 2:2827801/1‑100 (MQ=255) cgttTGAAAGGTCTTCTATAAAAAAGATGACAGCCATTACTGGCTGTCAGATTGAAAACTTAGTGGTTAACGAATTCCCCATCCCGATAAACTTTGCCtt > 1:893052/1‑100 (MQ=255) tGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTc > 1:1965090/1‑100 (MQ=255) tGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTc > 2:1000167/1‑100 (MQ=255) gAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCTAGATAAACTTTGCCTTTTTcc > 1:2390202/1‑100 (MQ=255) gAAAGGTCTGCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTcc > 1:2663941/1‑100 (MQ=255) aaGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCcac < 1:1169259/100‑1 (MQ=255) aGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCcaca > 2:14411/1‑100 (MQ=255) aGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCcaca > 1:3511603/1‑100 (MQ=255) cttctGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCAcatgca < 2:2072500/100‑1 (MQ=255) cttctGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCAcatgca > 2:1133086/1‑100 (MQ=255) cttctGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCAcatgca < 2:1760714/100‑1 (MQ=255) tctGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCAcatgcatg > 2:1193232/1‑100 (MQ=255) tctGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCAcatgcatg > 2:3696150/1‑100 (MQ=255) tctGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCAcatgcatg > 1:3223843/1‑100 (MQ=255) tctGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCAcatgcatg < 2:3223861/100‑1 (MQ=255) tGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGAc < 2:1632306/100‑1 (MQ=255) tGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGAc < 2:1232841/100‑1 (MQ=255) gTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACt > 1:2223837/1‑100 (MQ=255) tAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTa < 2:1005971/100‑1 (MQ=255) aaCAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTaa > 2:2593828/1‑100 (MQ=255) aCAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTTCACATGCATGACTaaa > 1:786462/1‑100 (MQ=255) aCAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTaaa < 2:2469035/100‑1 (MQ=255) aCAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTaaa > 1:2803523/1‑100 (MQ=255) tcaatctgaCAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATGCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAAc < 2:1572658/94‑1 (MQ=255) cgatcttgaCAGCCAGTAATGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAAc < 2:885037/94‑1 (MQ=255) cAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAAc < 2:2315210/100‑1 (MQ=255) caatctgaCAGCCAGTAATGGCTGTCAGATTGAAAATTTAGTTGTAAACGAAGTCGCCATCCAGATAAAATTTTCCTTTTACCACTTGCATGGCCaaaa > 1:2047308/6‑98 (MQ=16) atgatgACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCa < 1:151103/100‑1 (MQ=255) aatctgaCAGCCAGTAATGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAAcaa > 1:894570/5‑98 (MQ=39) aatctgaCAGCCAGTAATGGCTGTCAGATTGAAAATTTAGTGGTTAACGAAGTCCCCATACAGATAAACTTTGCCTTTTTCCACATGCATCACTAAACCa > 1:2176154/5‑100 (MQ=38) tgatgaCAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCAt < 2:3813032/100‑1 (MQ=255) atctgaCAGCCAGTAATGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCAt > 2:31101/4‑100 (MQ=255) gatgaCAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATc > 2:2882869/1‑100 (MQ=255) tgaCAGCCCTTACTGGCTGTCAGATTGAAAATTTAGTAGTTATCTAATTCCCCATCCAGATCACCTTTGCCTTTTTCCACATGCATGACTAAACCATcc < 1:1339910/99‑1 (MQ=255) gaCAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCa > 1:2256227/1‑99 (MQ=255) gaCAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCAg > 1:2310832/1‑100 (MQ=255) aCAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCAGa < 1:3696127/100‑1 (MQ=255) cAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCAGAt > 2:2985218/1‑100 (MQ=255) gCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCAGATaa > 2:6362/1‑100 (MQ=255) gCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCAGATaa > 2:943199/1‑100 (MQ=255) gCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCAGATa > 2:587851/1‑99 (MQ=255) | GCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCAGATAATCA > NC_000913/2364896‑2365093 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |