| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,457,128 | T→A | 17.4% | M678L (ATG→TTG) | fadJ ← | enoyl‑CoA hydratase/epimerase and isomerase/3‑hydroxyacyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,457,128 | 0 | T | A | 17.4% | 348.4 / 64.1 | 146 | M678L (ATG→TTG) | fadJ | enoyl‑CoA hydratase/epimerase and isomerase/3‑hydroxyacyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (52/68); new base A (11/14); total (64/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.75e-01 | |||||||||||
Only 100 of 150 total aligned reads displayed.
GCAGTTGTTTTCCAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGCCAATATCC > NC_000913/2457031‑2457225 | gcagttgTTTTCCAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCatta > 2:1460650/1‑100 (MQ=255) cagttgTTTTCCAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCattat > 2:414018/1‑100 (MQ=255) agttgTTTTCCAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCACGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCattatt > 1:804401/1‑100 (MQ=255) gttgttTTCCAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTg < 2:1591686/100‑1 (MQ=255) gttgttTTCCAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTg > 2:1203495/1‑100 (MQ=255) ttcttttCCAAAAACTTTCCCCAGGCGCGCCCACCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGc < 1:3498144/97‑1 (MQ=255) gttTTCCAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCaa < 2:228770/100‑1 (MQ=255) tttCCAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAAcc < 2:2956514/100‑1 (MQ=255) tCCAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCAc > 2:2400168/1‑100 (MQ=255) ccAAAATCTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCTATGGGTAAAACTTGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACt < 1:3470659/100‑1 (MQ=255) ccAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACt < 2:1698882/100‑1 (MQ=255) ccAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACt > 1:212228/1‑100 (MQ=255) ccAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCAATAATGCAACGACt < 2:1881756/100‑1 (MQ=255) ccAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACCCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACt > 2:2619204/1‑100 (MQ=255) cAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGCGAAGTGGTTGCAATAATGCAACGACt < 1:1076345/100‑1 (MQ=37) cAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACtt > 2:2003338/1‑100 (MQ=255) cAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCAATAATGCAACGACta > 2:2459568/1‑99 (MQ=255) cAAAAACTGTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGCGAAGTGGTTGCAATAATGCAACGACt < 1:1077997/100‑1 (MQ=37) aaaaaCTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCGCGGGCGAAGTGGTTGCAATAATGCAACGACt < 2:84898/100‑1 (MQ=21) aaaaCTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGCGAAGTGGTTGCAATAATGCAACGACttg < 2:689758/100‑2 (MQ=37) aaaCTTTCCCCACGCGCGCCCATCTCGACCAAGCGCTCGCAAGGGGTAAAACGGGAACCATACGGCG‑TGGCGAAGTGGTTGCAATAATGCAACGACttgc < 2:1069772/100‑3 (MQ=25) aaCTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGcc < 2:3533539/100‑1 (MQ=255) aCTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGCGAAGTGGTTGCAATAATGCAACGACttgcca < 2:2193848/100‑5 (MQ=25) aCTTGCCCCACGCGCGCCCATCTCGACCAAGCGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGccc < 1:1488339/100‑1 (MQ=255) ctctCCCCACGCGCGCCCAGCTCGACCAAGCGCTCGCAAGGGGTAACACGGGAACCATACTGCG‑TGGCGAAGTGGTTGCAATAATGCAACGACttgcca < 1:2176062/96‑5 (MQ=21) cTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCcg < 2:535168/100‑1 (MQ=255) ttCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCcgcg < 1:2215930/100‑1 (MQ=255) ttCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGCAAAACGGGAAACATACTGCG‑TAGC‑AAGTCGTTGAATTATTGCAACCACTTCCCCcgc > 1:1161811/1‑99 (MQ=255) ccccGCGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGcc < 1:2652929/100‑1 (MQ=255) ccccACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGCGAAGTGGTTGCAATAATGCAACGACttgccacgcag < 2:3714029/100‑10 (MQ=21) ccccACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGCGAAGTGGTTGCAATAATGCAACGACttgccacgcag < 2:1055602/100‑10 (MQ=21) cccACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCg < 2:2476463/100‑1 (MQ=255) cccACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCg > 2:687715/1‑100 (MQ=255) cACGCGCGCCCGTCTCGCCCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCgag < 2:2913402/100‑1 (MQ=255) cACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCgag > 2:278010/1‑100 (MQ=255) cACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCgag < 2:1809276/100‑1 (MQ=255) cgcgcgCCCATCTCGACCAACCGCTCGCACGGGGTCAAACCGGCACCATACAGCG‑TGGC‑AAGTAGCTCCACTATTGCCACCACTTCGCCcgcac > 1:1891334/1‑92 (MQ=255) cgcgcCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGaa < 2:2936359/100‑1 (MQ=255) cgcCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTTCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATc < 2:2683271/100‑1 (MQ=255) cgcCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATc < 2:3057584/100‑1 (MQ=255) gcCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCg < 1:2542700/100‑1 (MQ=255) gcCCATCTCGACCAAACGAGCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACGTCGCCCGCGCCGAGAGAATc < 1:951590/99‑1 (MQ=255) cccATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTTCATTATTGCTTCCACTTCGCACGCGCCGAGAGAATCGa > 1:3168046/1‑100 (MQ=255) ccATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGat < 2:594324/100‑1 (MQ=255) ccATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGat < 1:407048/100‑1 (MQ=255) aTCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGatat < 2:1232087/100‑1 (MQ=255) tctcGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGatat < 1:2278374/99‑1 (MQ=255) tcGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGc < 1:1162305/100‑1 (MQ=255) aCCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGa > 2:1571908/1‑100 (MQ=255) ccAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGaa > 2:652561/1‑100 (MQ=255) cAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAAc < 2:804409/100‑1 (MQ=255) cAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAAc < 1:783096/100‑1 (MQ=255) cAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGAATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGacc > 1:3562695/1‑98 (MQ=255) aCGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGt < 1:2972852/100‑1 (MQ=255) gCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTcc < 1:2034142/100‑1 (MQ=255) cGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCAcc < 2:1327239/100‑1 (MQ=255) cGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCAcc < 1:1279456/100‑1 (MQ=255) gCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCg < 2:2529340/100‑1 (MQ=255) cAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCga > 1:2849597/1‑100 (MQ=255) cAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCga < 1:1824244/100‑1 (MQ=255) aGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCgaga < 1:2862000/100‑1 (MQ=255) ggTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCCATATAGCGGAACGGTCCACCGCGAAAt > 2:1194762/1‑100 (MQ=255) ggTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATCATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCCGAACGGCCCCCCGAGaa > 1:3296663/1‑98 (MQ=255) tAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGCGAGAATCGATATAGCGGAACGGTCCACCGAGaa > 1:238738/1‑96 (MQ=255) tAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGCACGGTCCACCGAGaa > 1:2769234/1‑96 (MQ=255) aaaCGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCg > 2:3237162/1‑100 (MQ=255) aaCGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCgg < 1:306487/100‑1 (MQ=255) aaCGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAACCGATATAGCGGAACGGTCCACCGACAAAAggacg > 1:2808833/1‑97 (MQ=255) aaCGGGAACACTACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGACGAGAGAATTGATATAGCGGAACGGTCCACCGAGAAATGGCgg < 1:2501789/100‑1 (MQ=255) aCGGGAACCATACTGCG‑TGGC‑AAGTCGTTTCATTATTGCAACCACTTCGCCCGCGCCGAGTTATTTGATAATGAGAAGGCGACCACCGAGAAATGGCGGa < 1:704911/100‑1 (MQ=255) cGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGaa < 1:1218138/100‑1 (MQ=255) caaTACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCTAGACAATCGATATAGCCGAACTGCCCACCGACAAATCGCCGAAAAc > 1:3182243/3‑97 (MQ=255) aTACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATg < 2:441309/100‑1 (MQ=255) tACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGc < 1:975801/100‑1 (MQ=255) aCTGCG‑TGGC‑AAGTCGTTGCATTCTTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGCACGGCCCACCGCGAAATGGCGGAAAAACAACGc > 1:418554/1‑99 (MQ=255) tGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCaa < 1:3697804/100‑1 (MQ=255) gCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCaa > 2:3491448/1‑99 (MQ=255) atctgggcgaaGTGGTTGCAATAATGCAACGACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCa < 2:1504715/91‑1 (MQ=25) tGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATAc > 2:1144508/1‑100 (MQ=255) tGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATAc > 2:1144384/1‑100 (MQ=255) gggcgaaGTGGTTGCAATAATGCAACGACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCaagat > 1:1504706/6‑97 (MQ=37) gC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGCGAGAATCGATATAGCGGAACGGTCCCCCGAGAAATGGCGGAAAACCAATGCCAAATAcc > 1:1615990/1‑99 (MQ=255) gtaaGTCGTTGTATTATTGCAACAACGTCGCCCGCGACGAGAGAATTGATATAGAGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCaaa < 1:3261800/93‑1 (MQ=255) cgaaGTGGTTGCAATAATGCAACGACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACcg > 2:1714827/3‑100 (MQ=38) cgaaGTGGTTGCAATAATGCAACGACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACcg > 2:3166580/3‑100 (MQ=38) cgaaGTGGTTGCAATAATGCAACGACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACcg > 2:359470/3‑100 (MQ=38) gaaGTGGTTGCAATAATGCAACCACTTCGCCCGCGCAGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGTAAAACCAATACCAAAAAcccc > 1:2020766/2‑98 (MQ=255) aGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCgcgc < 2:2340921/100‑1 (MQ=255) gTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGcc < 2:3278813/100‑1 (MQ=255) gTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGcc < 1:2619191/100‑1 (MQ=255) tggTTGCAATAATGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGCCa > 2:2446232/3‑100 (MQ=255) tagatGCAATAATGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAACAGGTGGAACACCAATGCCAAACACCACCCCa > 1:700347/5‑100 (MQ=255) gTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGTGGAAAACCAATGCCAAATACCGCGCCAat > 2:2193984/1‑100 (MQ=255) gTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCGAAATACCGCGCCAat > 2:2378084/1‑100 (MQ=255) gTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGCCaa > 1:166248/1‑99 (MQ=255) gTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGCCAat > 2:3435640/1‑100 (MQ=255) gTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGCCAat < 2:2058974/100‑1 (MQ=255) tGCAATAATGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGCCAatat < 1:2112417/100‑1 (MQ=255) gCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGCCAATATc > 2:666574/1‑100 (MQ=255) cATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGCCAATATcc > 2:3697223/1‑100 (MQ=255) | GCAGTTGTTTTCCAAAAACTTTCCCCACGCGCGCCCATCTCGACCAAACGCTCGCAAGGGGTAAAACGGGAACCATACTGCG‑TGGC‑AAGTCGTTGCATTATTGCAACCACTTCGCCCGCGCCGAGAGAATCGATATAGCGGAACGGTCCACCGAGAAATGGCGGAAAACCAATGCCAAATACCGCGCCAATATCC > NC_000913/2457031‑2457225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |