| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,917,345 | G→A | 100% | G763G (GGG→GGA) | barA → | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,917,345 | 0 | G | A | 99.2% | 478.4 / ‑4.4 | 144 | G763G (GGG→GGA) | barA | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (74/68); total (75/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 144 total aligned reads displayed.
AACTCATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGGATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGCGTCGT > NC_000913/2917248‑2917440 | aaCTCATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAAt > 2:2996907/1‑100 (MQ=255) aCTCAACCACCAACTCCCGCACCAGCAACAAAAGCCGGTTATCGCGGTAA‑CGGCGTATGCAAAAAAAAAAAAAAAAGAGAAGCTGCTTGGCGCAGGAATg < 1:2779508/100‑1 (MQ=255) cTCATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATg > 1:1537329/1‑99 (MQ=255) cTCATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGa > 1:1823166/1‑100 (MQ=255) cTCATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGa > 2:2659184/1‑100 (MQ=255) tCATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAg > 1:1434791/1‑100 (MQ=255) cATCGACCAACTCCCGCAGCAGCAACAAACGCCGGTTATCGGGGGAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGc < 1:1709786/100‑1 (MQ=255) cATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGc > 2:3366127/1‑100 (MQ=255) cATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGc > 2:3320885/1‑100 (MQ=255) cATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGc < 2:3010436/100‑1 (MQ=255) aTCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCg < 2:3101246/100‑1 (MQ=255) aTCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCg > 2:709655/1‑100 (MQ=255) tCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGa > 2:2294117/1‑100 (MQ=255) ccaccaACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGAt > 2:1590277/1‑100 (MQ=255) ccaccaACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGAt > 1:2393987/1‑100 (MQ=255) caccaACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGAtt < 1:1424826/100‑1 (MQ=255) caccaACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGAtt > 2:2467459/1‑100 (MQ=255) caccaACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGAtt < 2:2603675/100‑1 (MQ=255) ccaACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTAt > 2:632029/1‑100 (MQ=255) aaCTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCt > 1:3406268/1‑100 (MQ=255) cTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTg > 1:921555/1‑99 (MQ=255) tCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGc < 2:3657764/100‑1 (MQ=255) cccGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCg > 2:2820799/1‑100 (MQ=255) cccGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCg > 2:3373652/1‑100 (MQ=255) ccGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGa > 1:597491/1‑100 (MQ=255) cgaaTCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGAAAAAAAAAAAAAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGaa < 1:1923101/97‑1 (MQ=255) cGCATCAGGAACAAACGACGGTTATCGCGGTAA‑CGGCGCAGGCAATGGCCGGGCAAAAAGAGAAGCTGGTTGGCGAAGGGATGAGCGATTATCTGGAGaa > 1:782937/1‑100 (MQ=255) cATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAAc < 1:2820785/100‑1 (MQ=255) aTCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAAc < 1:3205708/99‑1 (MQ=255) aTCAGCAACAAACGCCGGTTATAGCGGTAA‑CGGCGCATGAAAAAAAAAAAAAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAAc < 1:1474420/99‑1 (MQ=255) aGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGAt > 1:660473/1‑100 (MQ=255) gCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGAtt < 2:3797767/100‑1 (MQ=255) gCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGAtt > 1:625783/1‑100 (MQ=255) caacaaACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTg < 2:2123205/100‑1 (MQ=255) acaaACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGTCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTga < 1:3267363/99‑1 (MQ=255) caaACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTgaag > 1:3590595/1‑100 (MQ=255) catgcgccgTTACCGCGATAACCGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTgaag > 1:2232050/9‑100 (MQ=37) aaaCGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTgaaga > 1:2974112/1‑100 (MQ=255) aaaCGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTgaaga > 1:1981941/1‑100 (MQ=255) gCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAagag < 2:937874/100‑1 (MQ=255) ccGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGc > 2:1231791/1‑100 (MQ=255) ccGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGc < 1:2102076/100‑1 (MQ=255) cGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGCGCGATTATCTGGCGAACCCGATTGAAGAAGAGc < 1:3038679/99‑1 (MQ=255) ggTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAAAGAGCGCTTATCTGGTGAAACCGATTGAAGAAGAGCGa > 1:2568035/1‑100 (MQ=255) gTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGAt > 1:2580389/1‑100 (MQ=255) tATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAATAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTg < 2:1120995/100‑1 (MQ=255) aTCGCGGTAA‑CGGCGCATGTAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGc < 2:2687855/100‑1 (MQ=255) aTCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGc > 1:2643076/1‑100 (MQ=255) cgcgGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCAt > 2:17794/1‑100 (MQ=255) cgGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATaa < 2:1586838/100‑1 (MQ=255) cgGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATaa > 1:1091654/1‑100 (MQ=255) gTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAAtt > 1:37476/1‑100 (MQ=255) a‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATttgt < 2:2351492/100‑1 (MQ=255) cGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATttgtt < 2:1685376/100‑1 (MQ=255) cGGCGCATGCAAGGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATttgtt < 1:3566548/100‑1 (MQ=255) cgcATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATttgttgtn < 1:1023115/100‑2 (MQ=255) cATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTgc < 1:1982311/100‑1 (MQ=255) cATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTgc > 1:3652291/1‑100 (MQ=255) atacaaggaccGGACAAAGAGAGAATTCGCGTGACGCAGCAATGATCGATTATCTGTCGATACCGCTTCAAGTATAGCGATTGCATAATttgctgt < 1:3582579/87‑1 (MQ=255) aTGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTgcg < 1:3366107/100‑1 (MQ=255) gCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCt > 2:1670283/1‑100 (MQ=255) gCAATGGCCGGGCAAAAAGAGAAGCTACTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCt > 1:2257494/1‑100 (MQ=255) cAATGGCCGGGCAAAAAGAGAAGCTTCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTgcgc < 1:3541339/98‑1 (MQ=255) cAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTa < 1:1234691/100‑1 (MQ=255) cAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTa > 2:1863186/1‑100 (MQ=255) aTGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACa > 2:25597/1‑100 (MQ=255) gCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGc > 1:2378343/1‑100 (MQ=255) ccGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGcc > 1:182575/1‑100 (MQ=255) cGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCt > 2:890320/1‑100 (MQ=255) cGGGCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCt > 2:2362504/1‑100 (MQ=255) gggCAAAAAGAGAAGCTGCTTGGGGGAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGcc < 1:812285/98‑1 (MQ=255) gggCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTg < 1:397667/100‑1 (MQ=255) gggCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTg > 2:3547072/1‑100 (MQ=255) ggCAAAAAGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTgg < 2:1432959/100‑1 (MQ=255) aaagaGCGAAGCTGCTTTGCGCAGGAATGAGCGATTGGCTGGCGAAACCGATTGAAGAAGAGCGATTTGATGATCTGTTGTTGCGCTACCAGGCGGGCAg > 1:3018915/1‑100 (MQ=255) aaaaaGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAg > 2:1869152/1‑100 (MQ=255) aaaaGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGc < 2:2006151/100‑1 (MQ=255) aaaaGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGc > 1:1783035/1‑100 (MQ=255) aaaaGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAAACGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGGTACAAGCCTGGCAg > 1:932706/1‑99 (MQ=255) aaGAGAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCgg < 2:3590617/100‑1 (MQ=255) agagAAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGt < 2:2129685/100‑1 (MQ=255) gagaAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCgg < 1:2310236/98‑1 (MQ=255) gagaAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTa < 1:3424277/100‑1 (MQ=255) gaAGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTAtt < 2:1844441/100‑1 (MQ=255) aaGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTAttt < 1:3056475/100‑1 (MQ=255) aGCTGCTTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTc > 1:2069287/1‑100 (MQ=255) gctgctTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTcc < 2:2947716/100‑1 (MQ=255) gctTGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCctct > 2:3470793/1‑100 (MQ=255) ttGGCGCAGGGATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTcg < 2:2277041/100‑1 (MQ=255) ttGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTcg < 1:890313/100‑1 (MQ=255) ttGGCGCAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTcg < 2:1600876/100‑1 (MQ=255) gcgcAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGcgt < 1:1863177/100‑1 (MQ=255) cgcAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGcgtc > 1:2845713/1‑100 (MQ=255) cgcAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGcgtc > 1:2488710/1‑100 (MQ=255) cgcAGGAATGAGCGATTATCTGGCGAAACCGATGGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGcgtc > 1:2294522/1‑100 (MQ=255) gcAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGcgtcg < 2:1981951/100‑1 (MQ=255) gcAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGcgtcg < 1:147451/100‑1 (MQ=255) cAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGcgtcgt > 2:2417866/1‑100 (MQ=255) cAGGAATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGcgtcgt > 1:960289/1‑100 (MQ=255) cAGGAATGAGCGATTAGCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGcgtcgt < 1:3373632/100‑1 (MQ=255) | AACTCATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAA‑CGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGGATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGCGTCGT > NC_000913/2917248‑2917440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |