| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,705,970 | G→A | 23.1% | intergenic (‑180/+128) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,970 | 0 | G | A | 23.1% | 393.0 / 107.6 | 182 | intergenic (‑180/+128) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (69/71); new base A (33/9); total (102/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.48e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.86e-02 | |||||||||||
Only 100 of 189 total aligned reads displayed.
GGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGC > NC_000913/3705873‑3706068 | gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 1:2747145/1‑100 (MQ=255)gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 1:3035289/1‑100 (MQ=255)gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 2:3461548/1‑100 (MQ=255) aaTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcggcg < 1:856089/100‑1 (MQ=255) aaTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcggcg < 1:947869/100‑1 (MQ=255) tGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGtt < 2:71224/100‑1 (MQ=255) gAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTa > 1:1229326/1‑100 (MQ=255) aaGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTaa > 1:85964/1‑100 (MQ=255) aGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAc > 2:2484952/1‑100 (MQ=255) gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAc < 2:1888034/99‑1 (MQ=255) gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACg > 1:3673142/1‑100 (MQ=255) gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACg > 2:2011281/1‑100 (MQ=255) aTTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGcc < 1:3240886/100‑1 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCtt < 1:564723/99‑1 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa > 1:2170085/1‑100 (MQ=255) ctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTAt > 1:1952097/1‑100 (MQ=255) ctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTAt > 1:1994346/1‑100 (MQ=255) tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc < 1:3196072/100‑1 (MQ=255) gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc > 2:590897/1‑100 (MQ=255) ccGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCg < 1:3371274/100‑1 (MQ=255) cGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCgg < 2:2199478/100‑1 (MQ=37) cGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCgg < 2:2198857/100‑1 (MQ=37) ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGc < 1:1830443/100‑1 (MQ=255) ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGc < 2:654093/100‑1 (MQ=37) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGca < 1:1439088/100‑2 (MQ=37) gATGGCGCGGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTGTGGTTATGCCGGATGCGGCGTTATCGCCTTATCCGGcc < 1:1279210/100‑1 (MQ=25) tGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGCATa < 1:1804698/100‑1 (MQ=37) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATCCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑a < 1:2011271/100‑1 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCAGCCTAC‑a > 1:363104/1‑100 (MQ=255) cgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCAGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑aa > 1:2173830/1‑100 (MQ=255) gCACGCAGAGGCACGGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATc > 1:2716316/1‑100 (MQ=255) gCACGCAGAGGCACAGCGCCACCGTATATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAAt > 1:1924241/1‑99 (MQ=255) gCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATc > 1:3744004/1‑100 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg < 2:2170651/100‑1 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg < 2:573253/100‑1 (MQ=255) aCGCAGAGGCACAGCGCCACCGGGTATACAGACTGTTGAGAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑agaa > 1:3529737/1‑96 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AACATCGTg > 2:1401492/1‑100 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTg < 2:2630196/100‑1 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTg > 1:2084578/1‑100 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTg > 2:3473030/1‑100 (MQ=21) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 2:749898/100‑1 (MQ=255) gagGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑caa > 1:798010/1‑100 (MQ=255) ggCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTTCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAAtt > 1:2348052/1‑100 (MQ=255) ggCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAAtt > 2:3407449/1‑100 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCa < 2:857784/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCa < 2:3103257/100‑1 (MQ=255) cacaGCGCCACCGGGTATAATAATTGTTGCCAAAGTGCGCATTGTTTATGCCGGATGCGGCGTTAACGCCCTATCCGGCCTAC‑AAAATCGTGccattt > 1:2654461/1‑93 (MQ=17) caacgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTGTGCCGGATGCGGCGTTAACACCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCa > 1:2379309/4‑98 (MQ=255) caGCGTCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAAt < 2:1266067/100‑1 (MQ=255) gagcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATAc < 2:2470253/98‑1 (MQ=255) gcCACTGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACAt > 2:1213499/1‑100 (MQ=255) aCCGGGTATACACCTTGTTGACAAAGTCCGCTTTGTTTATCTCGGATGCGTCCTTAACGCCTTATCCGTCCTAC‑AAAATCGTGC‑AAATTCATTACATTGc < 1:313699/100‑1 (MQ=17) gggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGa > 2:1992425/1‑100 (MQ=255) gTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑CAATTCAATACATTGC‑‑AGAAt < 1:2326995/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑g < 2:492490/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑g > 1:1904156/1‑100 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑g > 2:3218815/1‑100 (MQ=255) tgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGc > 1:3800681/1‑100 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGcc < 2:2951956/100‑1 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGcc > 2:161064/1‑100 (MQ=255) ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCt > 2:1823407/1‑100 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTg > 1:3438451/1‑100 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGAt < 2:1501042/100‑1 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATa > 1:3196531/1‑100 (MQ=255) tGCGCGTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCgg < 1:1307701/100‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAg < 1:2709829/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGTCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc > 1:2611423/1‑100 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGTTAAGCg > 2:2423031/1‑97 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc > 2:2063265/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg > 2:2643108/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg < 1:1419714/100‑1 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCa > 2:301389/1‑100 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCa < 1:373835/100‑1 (MQ=255) tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCAt > 1:1198358/1‑100 (MQ=255) ttgtaggCCGGATAAGGCGTTTACGCCGCATCTGGCCTAC‑AAATTCTTCC‑AAATTCAATATATTGC‑‑AGAAA‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCATc > 2:2307935/7‑100 (MQ=18) ttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGC‑AAATTCAATATATTGC‑‑‑‑AAT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATc > 2:1720692/7‑100 (MQ=18) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATc > 1:2451771/1‑100 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATc < 2:1256428/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg < 2:2716330/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATAC‑AAATTC‑TGC‑AAATTCAACAAATTGC‑‑‑GAATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 1:1548395/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGA‑AAATTCAATATATTGC‑‑AGGAG‑CTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:2838790/5‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTAT‑AAATTCAATGTATTGC‑‑AGTTT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAgg > 2:2889443/4‑100 (MQ=25) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGA‑AAATTCAATATATTGC‑‑AGGAG‑CTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:1252712/4‑100 (MQ=17) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCTTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAgg < 1:3496329/100‑1 (MQ=255) nggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑ATACCGCGC‑AAATTCAATATATTGCGGAGAAA‑AT‑‑‑‑GTAGGCCTGATAAGCGTAGCGCGTCAGGct > 1:2043341/3‑99 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGC‑TAATTCAATATATTGC‑‑AGAAA‑CCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:431207/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGC‑AAATTCAATATATTGC‑‑AGGAA‑ACAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGc > 2:172828/3‑100 (MQ=18) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa > 2:1530808/1‑100 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa < 2:406035/100‑1 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:1379054/1‑100 (MQ=255) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGC‑CAATTCAATATATTGC‑‑AGGAC‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2265583/2‑100 (MQ=18) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:2885851/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCTGGCCTAC‑AAATTCTTCC‑AAATTCAATATATTGC‑‑AGAAA‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:2975010/1‑99 (MQ=18) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAATGTGC‑AAATTCAATAAATTGC‑‑A‑AAT‑CAACATGTAGGCCGGATAAGCGCAGCGCATCAGGCa > 1:2571710/1‑100 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGC‑TAATTCAATATATTGT‑‑GGGCT‑CCAC‑‑GTAGGCCTGATAAGCGTAGCTCATCAGGCag > 1:2497197/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGC‑TAATTCAATATATTGC‑‑AGGGA‑CTAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCag > 1:1217899/1‑99 (MQ=18) cGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGATCGCATCAGGCAtt > 2:1094665/1‑99 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:3025232/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:2232917/100‑1 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc < 2:1952107/100‑1 (MQ=255) | GGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGC > NC_000913/3705873‑3706068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |